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The map label for this gene is 116623923

Identifier: 116623923

GI number: 116623923

Start: 6108827

End: 6109528

Strand: Direct

Name: 116623923

Synonym: Acid_4835

Alternate gene names: NA

Gene position: 6108827-6109528 (Clockwise)

Preceding gene: 116623920

Following gene: 116623928

Centisome position: 61.3

GC content: 65.1

Gene sequence:

>702_bases
GTGCTAGAACTACTCCAACAAGAAATCATACACTGCTGCCGCTGCCCGCGACTTTGCGCGCACACTGCGGAAATCGCGGA
GCTCAAACGCCGCGCCTACCGTGACCAAACCTACTGGGGGCGCCCCGTCCCCTCCTTCGGCGACCCCAACGCCCGCGTCC
TCATCCTCGGCCTCGCCCCCGGCGCCCACGGCTCCAACCGCACCGGCCGCATGTTCACCGGCGACCGCTCCGGCGATATC
CTATATCGCGTCCTTCACCACACCGGTTTCGCCTCCCAACCCGTCGCCGTCTCCCGCGAAGACGGTCTCCAGCTCCACGA
CCTGTACATCACTGCTGCCGCCCACTGCGCTCCGCCCGGCAACAAGCCCACGCCCCAGGAACTCCGCAATTGCCGTCCAT
ACCTCGAACGCGAGCTTGAACTGCTGACCAACCTGAAGGTCGTAGTGGCCCTCGGCAAGATCGCGTTCGACGTCTACCTC
GACGTCCTCAAGTCCCAAGGCGTGATCTCCAGCCGCGCCCCCTTCCTCTTCGGCCACGATCTCCAATACCGTACCGCCCC
CGGCCACCCGATCCTGATCGCGTCCTACCACCCCAGCCAGCAAAACACGTCCACCGGCAAACTCACCGAAAAAATGCTCA
CCGACGTTTTCCGCCGCGCCCGTAGGATCGGGCTCCCGGCGCGGCCGCGTTCTGCGAGATGA

Upstream 100 bases:

>100_bases
GACACAACTTTCGGCCGGAGCAGCCGACTATCTAATTCTGTGCTCCAACCGCCTTCTCAGTCAAGCGAAATCTTTCCTAT
TCTAAGATATAGGGATAAAT

Downstream 100 bases:

>100_bases
ACCCCTCCTCGCTGGCCGATCGTATTTCGCGAGGCACCGCCTGCACTTTCTGGCGCCGCGAAGAATCAAGGCCTTCCCGT
CGCGGCTCGTCAGTTAGCCG

Product: uracil-DNA glycosylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MLELLQQEIIHCCRCPRLCAHTAEIAELKRRAYRDQTYWGRPVPSFGDPNARVLILGLAPGAHGSNRTGRMFTGDRSGDI
LYRVLHHTGFASQPVAVSREDGLQLHDLYITAAAHCAPPGNKPTPQELRNCRPYLERELELLTNLKVVVALGKIAFDVYL
DVLKSQGVISSRAPFLFGHDLQYRTAPGHPILIASYHPSQQNTSTGKLTEKMLTDVFRRARRIGLPARPRSAR

Sequences:

>Translated_233_residues
MLELLQQEIIHCCRCPRLCAHTAEIAELKRRAYRDQTYWGRPVPSFGDPNARVLILGLAPGAHGSNRTGRMFTGDRSGDI
LYRVLHHTGFASQPVAVSREDGLQLHDLYITAAAHCAPPGNKPTPQELRNCRPYLERELELLTNLKVVVALGKIAFDVYL
DVLKSQGVISSRAPFLFGHDLQYRTAPGHPILIASYHPSQQNTSTGKLTEKMLTDVFRRARRIGLPARPRSAR
>Mature_233_residues
MLELLQQEIIHCCRCPRLCAHTAEIAELKRRAYRDQTYWGRPVPSFGDPNARVLILGLAPGAHGSNRTGRMFTGDRSGDI
LYRVLHHTGFASQPVAVSREDGLQLHDLYITAAAHCAPPGNKPTPQELRNCRPYLERELELLTNLKVVVALGKIAFDVYL
DVLKSQGVISSRAPFLFGHDLQYRTAPGHPILIASYHPSQQNTSTGKLTEKMLTDVFRRARRIGLPARPRSAR

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1105 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 26053; Mature: 26053

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELLQQEIIHCCRCPRLCAHTAEIAELKRRAYRDQTYWGRPVPSFGDPNARVLILGLAP
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECC
GAHGSNRTGRMFTGDRSGDILYRVLHHTGFASQPVAVSREDGLQLHDLYITAAAHCAPPG
CCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEHEEEHHHHCCCCC
NKPTPQELRNCRPYLERELELLTNLKVVVALGKIAFDVYLDVLKSQGVISSRAPFLFGHD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
LQYRTAPGHPILIASYHPSQQNTSTGKLTEKMLTDVFRRARRIGLPARPRSAR
CEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLELLQQEIIHCCRCPRLCAHTAEIAELKRRAYRDQTYWGRPVPSFGDPNARVLILGLAP
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECC
GAHGSNRTGRMFTGDRSGDILYRVLHHTGFASQPVAVSREDGLQLHDLYITAAAHCAPPG
CCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEHEEEHHHHCCCCC
NKPTPQELRNCRPYLERELELLTNLKVVVALGKIAFDVYLDVLKSQGVISSRAPFLFGHD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
LQYRTAPGHPILIASYHPSQQNTSTGKLTEKMLTDVFRRARRIGLPARPRSAR
CEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]