| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is glnA [H]
Identifier: 116623919
GI number: 116623919
Start: 6103963
End: 6105393
Strand: Direct
Name: glnA [H]
Synonym: Acid_4831
Alternate gene names: 116623919
Gene position: 6103963-6105393 (Clockwise)
Preceding gene: 116623918
Following gene: 116623920
Centisome position: 61.25
GC content: 59.19
Gene sequence:
>1431_bases ATGGCAAACGAACTCCAAGACTTTCTGAAGCTTTCTTACACGGAACTGGAAGAGTTGAATCTCGAGGCGAAAGCCGACCG GATGGGCCGCAAGCCCATGCACGAGATTCAGGAGAAGCGCCTTAAGTACCTCACGGACGAGAAGCGCATCAAGGCCGTCA CGGTCCTTTTTAGCGATCTCGAAGGCCGTCTCCACATGCTCGATTACGACAAGAAGTTCCTTGTTAAGAGCTGGGACAAT CTGACTTTTGACGGCTCCTCCATCCGCGGCTTCACCGCCCAGCGCGAGAGCGATCTTCGCCTGAATATGGATTGGAGCGC CTTCTACTGGGCGCCTTCCGATATCTTCGGCGCCGGAAAGGTGCTGGTCTTCGGCGAGGTCATCGATAAAGACGGCACGC CTTACAGCGCCGACATCCGCGGCGTGCTCAAGGCATACGCGCAGAGCCTTTTCGATAAACAGGGCTACACGCTGAACGCC GCCAACGAAATCGAAGGCTTCCTTTTCAACGGCTCCGACGCCGAGCGCCGCTACCACGAAACCACGAAGTTCGATTACGT CAACACCGGCGGCTACTATCACTCGCTGCCCGGCGACCCCCTGCGCAAATTCATCGACACTTGCGCCGAGGTGCAGCGCG CCATGGGCTTCCAGAATGAAAAGGATCACCCTGAAGTCGCGCCCTCACAGTTCGAAATCAACTACAGCTATGCCGAAGTG GTGGCCGCGGCGGACCAGATTCAGCTCTACAAGCTGATCTGCCGCCAGGTCGCGACCGGCATGGGGCTCACCGCCAGCTT CCTGCCCAAACCCGTTGTCGGCGTCAACGGCAGCGGCATGCACACGAACGTCTCCATCACCAAGAACGGCAAGAACCTGT TCTGGGATCCCTCCGGCCAGGAGAAGATGAGCAAGTTCGCATGGCAGTTCGTGGACCGCATTCTCACCCACGGCAACGAT CTCTGCCTGCTGCTCAACGCCAGCGTCAACGCCTACCGCCGCCTCGATCCGCACTTCGAAGCTCCCAACCAGATCAAGGC GTCGGCCACCGATCGCGGTTCCATGATCCGCATCCCGATCGGCAACGAGCGCAGCTCGCGCGTCGAAGTCCGCTCGGTGG GGCCGGACGCCAACCCGTACATGGTGATGCTTTCCGTGTTCCGCACCGGGCTCGATGGCGAGACCGCGAAGATCAAGAAC TTGCGCTCCGCCGAACGCTACCTGCCCGACAACGTCTATGACGCTCTGGCCAATTTTAAGAACGCGGAGTGGACCACCAA ACTGCTCGGCGAAGATGTGAAGGGCCGTTATGCCGACCTGAAGCAATCTTCCGCCGACCGCTGTCCGCGGCTCCTGGGGA CCTTCGTGAAGGCGCCCGAAGTGCAGTATCACCACGAAGTCTACAACCAGTTCCTCTGGAATATGTTCTAG
Upstream 100 bases:
>100_bases ATCTATTGCCAACGCCGAAGAAACCGTTGCCAGAAGCGGTCCCGGTCATTCACAATCGATTATCCCCCGTCAGTAACGGA AATATCGGATTGGAAGACTA
Downstream 100 bases:
>100_bases GCTCAAAAAACACGCGGAGACGGGCCACCCCCGCCTCCGCGTTCCTATCGTGCTTCGCCCCCGTCGATGCGAAGACAACC TCAACGGAGGCGGTCATGCT
Product: L-glutamine synthetase
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MANELQDFLKLSYTELEELNLEAKADRMGRKPMHEIQEKRLKYLTDEKRIKAVTVLFSDLEGRLHMLDYDKKFLVKSWDN LTFDGSSIRGFTAQRESDLRLNMDWSAFYWAPSDIFGAGKVLVFGEVIDKDGTPYSADIRGVLKAYAQSLFDKQGYTLNA ANEIEGFLFNGSDAERRYHETTKFDYVNTGGYYHSLPGDPLRKFIDTCAEVQRAMGFQNEKDHPEVAPSQFEINYSYAEV VAAADQIQLYKLICRQVATGMGLTASFLPKPVVGVNGSGMHTNVSITKNGKNLFWDPSGQEKMSKFAWQFVDRILTHGND LCLLLNASVNAYRRLDPHFEAPNQIKASATDRGSMIRIPIGNERSSRVEVRSVGPDANPYMVMLSVFRTGLDGETAKIKN LRSAERYLPDNVYDALANFKNAEWTTKLLGEDVKGRYADLKQSSADRCPRLLGTFVKAPEVQYHHEVYNQFLWNMF
Sequences:
>Translated_476_residues MANELQDFLKLSYTELEELNLEAKADRMGRKPMHEIQEKRLKYLTDEKRIKAVTVLFSDLEGRLHMLDYDKKFLVKSWDN LTFDGSSIRGFTAQRESDLRLNMDWSAFYWAPSDIFGAGKVLVFGEVIDKDGTPYSADIRGVLKAYAQSLFDKQGYTLNA ANEIEGFLFNGSDAERRYHETTKFDYVNTGGYYHSLPGDPLRKFIDTCAEVQRAMGFQNEKDHPEVAPSQFEINYSYAEV VAAADQIQLYKLICRQVATGMGLTASFLPKPVVGVNGSGMHTNVSITKNGKNLFWDPSGQEKMSKFAWQFVDRILTHGND LCLLLNASVNAYRRLDPHFEAPNQIKASATDRGSMIRIPIGNERSSRVEVRSVGPDANPYMVMLSVFRTGLDGETAKIKN LRSAERYLPDNVYDALANFKNAEWTTKLLGEDVKGRYADLKQSSADRCPRLLGTFVKAPEVQYHHEVYNQFLWNMF >Mature_475_residues ANELQDFLKLSYTELEELNLEAKADRMGRKPMHEIQEKRLKYLTDEKRIKAVTVLFSDLEGRLHMLDYDKKFLVKSWDNL TFDGSSIRGFTAQRESDLRLNMDWSAFYWAPSDIFGAGKVLVFGEVIDKDGTPYSADIRGVLKAYAQSLFDKQGYTLNAA NEIEGFLFNGSDAERRYHETTKFDYVNTGGYYHSLPGDPLRKFIDTCAEVQRAMGFQNEKDHPEVAPSQFEINYSYAEVV AAADQIQLYKLICRQVATGMGLTASFLPKPVVGVNGSGMHTNVSITKNGKNLFWDPSGQEKMSKFAWQFVDRILTHGNDL CLLLNASVNAYRRLDPHFEAPNQIKASATDRGSMIRIPIGNERSSRVEVRSVGPDANPYMVMLSVFRTGLDGETAKIKNL RSAERYLPDNVYDALANFKNAEWTTKLLGEDVKGRYADLKQSSADRCPRLLGTFVKAPEVQYHHEVYNQFLWNMF
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=402, Percent_Identity=32.089552238806, Blast_Score=158, Evalue=6e-40, Organism=Escherichia coli, GI87081870, Length=344, Percent_Identity=29.3604651162791, Blast_Score=112, Evalue=6e-26,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 54109; Mature: 53978
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANELQDFLKLSYTELEELNLEAKADRMGRKPMHEIQEKRLKYLTDEKRIKAVTVLFSDL CCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC EGRLHMLDYDKKFLVKSWDNLTFDGSSIRGFTAQRESDLRLNMDWSAFYWAPSDIFGAGK CCCEEEECCCHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEECCCCEEEECCHHHCCCCE VLVFGEVIDKDGTPYSADIRGVLKAYAQSLFDKQGYTLNAANEIEGFLFNGSDAERRYHE EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCHHHHHHH TTKFDYVNTGGYYHSLPGDPLRKFIDTCAEVQRAMGFQNEKDHPEVAPSQFEINYSYAEV CCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHH VAAADQIQLYKLICRQVATGMGLTASFLPKPVVGVNGSGMHTNVSITKNGKNLFWDPSGQ HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCH EKMSKFAWQFVDRILTHGNDLCLLLNASVNAYRRLDPHFEAPNQIKASATDRGSMIRIPI HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCEECCCCCCCCEEEEEC GNERSSRVEVRSVGPDANPYMVMLSVFRTGLDGETAKIKNLRSAERYLPDNVYDALANFK CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCC NAEWTTKLLGEDVKGRYADLKQSSADRCPRLLGTFVKAPEVQYHHEVYNQFLWNMF CCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ANELQDFLKLSYTELEELNLEAKADRMGRKPMHEIQEKRLKYLTDEKRIKAVTVLFSDL CHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC EGRLHMLDYDKKFLVKSWDNLTFDGSSIRGFTAQRESDLRLNMDWSAFYWAPSDIFGAGK CCCEEEECCCHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEECCCCEEEECCHHHCCCCE VLVFGEVIDKDGTPYSADIRGVLKAYAQSLFDKQGYTLNAANEIEGFLFNGSDAERRYHE EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCHHHHHHH TTKFDYVNTGGYYHSLPGDPLRKFIDTCAEVQRAMGFQNEKDHPEVAPSQFEINYSYAEV CCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHH VAAADQIQLYKLICRQVATGMGLTASFLPKPVVGVNGSGMHTNVSITKNGKNLFWDPSGQ HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCH EKMSKFAWQFVDRILTHGNDLCLLLNASVNAYRRLDPHFEAPNQIKASATDRGSMIRIPI HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCEECCCCCCCCEEEEEC GNERSSRVEVRSVGPDANPYMVMLSVFRTGLDGETAKIKNLRSAERYLPDNVYDALANFK CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCC NAEWTTKLLGEDVKGRYADLKQSSADRCPRLLGTFVKAPEVQYHHEVYNQFLWNMF CCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2572584 [H]