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The map label for this gene is yhbO [H]

Identifier: 116623912

GI number: 116623912

Start: 6095210

End: 6095761

Strand: Direct

Name: yhbO [H]

Synonym: Acid_4824

Alternate gene names: 116623912

Gene position: 6095210-6095761 (Clockwise)

Preceding gene: 116623910

Following gene: 116623913

Centisome position: 61.16

GC content: 64.86

Gene sequence:

>552_bases
ATGAGCCGCAAAGTCCTGATTGTTACCGGTGACGGCGGAGACAGCTACGAAGCGCTGTACGGCTGCCAGAGATTCCTTGA
GGCCAACTGGGAACCGGTCATCGCGGCGCCCGCGCGGCGCCGGCTCCACATGGTCTTCCACGATTCCGAGCCCGGCTGGG
ACACCTACGTGGAGCGGCCCGGCCATGCCGTGGAAGCGCGCATGGCGATCACGGCCGTTGCCTCCAAGGATTTCGCCGGC
ATCATTATTCTCGGCGGCCGCGCTCCGGAATATCTTCGCAACGACACCAGCCTGCTGTCGCTGGTGCGCGAATTCGCCGA
CCAGAACAAGTGCGTCTGCGCCATCGGCCACGGTATCCAGGTGCTGGTCGCGGCCGGATTGACCAAGGGCCGAACCGTCA
CCGGACACCCCCATGTCTGCGTGGAGGTGGAGCGAGGAGGCGGCACGTATAGCGAGAAAATGGCGGTGCGCGACGGGCGC
ATGATCACCGCGCAATCGTGGAAGGCTCACCCCGAGTTCTATCGCGAGGTGCTGGCTTGTCTCGGCGCCTGA

Upstream 100 bases:

>100_bases
ACATCAGCCCCGCGGCGCCCGCTCCGATGATCACCACGTCCGCGGACGGTATCGACATCCCCTATCATTCTGGCAGAGCC
GCGCGTTATGCTGGCTGTCG

Downstream 100 bases:

>100_bases
TCTTTTCCCTCTTGCTGCTGGCCGCGCTGGCTTCGGCGCAGACCGCCGATGGCTGGAAACTCGTGTGGTCCGACGAGTTC
GATCAGGATGGCCGCCCCGA

Product: ThiJ/PfpI domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSRKVLIVTGDGGDSYEALYGCQRFLEANWEPVIAAPARRRLHMVFHDSEPGWDTYVERPGHAVEARMAITAVASKDFAG
IIILGGRAPEYLRNDTSLLSLVREFADQNKCVCAIGHGIQVLVAAGLTKGRTVTGHPHVCVEVERGGGTYSEKMAVRDGR
MITAQSWKAHPEFYREVLACLGA

Sequences:

>Translated_183_residues
MSRKVLIVTGDGGDSYEALYGCQRFLEANWEPVIAAPARRRLHMVFHDSEPGWDTYVERPGHAVEARMAITAVASKDFAG
IIILGGRAPEYLRNDTSLLSLVREFADQNKCVCAIGHGIQVLVAAGLTKGRTVTGHPHVCVEVERGGGTYSEKMAVRDGR
MITAQSWKAHPEFYREVLACLGA
>Mature_182_residues
SRKVLIVTGDGGDSYEALYGCQRFLEANWEPVIAAPARRRLHMVFHDSEPGWDTYVERPGHAVEARMAITAVASKDFAGI
IILGGRAPEYLRNDTSLLSLVREFADQNKCVCAIGHGIQVLVAAGLTKGRTVTGHPHVCVEVERGGGTYSEKMAVRDGRM
ITAQSWKAHPEFYREVLACLGA

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=185, Percent_Identity=27.027027027027, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 20027; Mature: 19896

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKVLIVTGDGGDSYEALYGCQRFLEANWEPVIAAPARRRLHMVFHDSEPGWDTYVERP
CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHHHHCCC
GHAVEARMAITAVASKDFAGIIILGGRAPEYLRNDTSLLSLVREFADQNKCVCAIGHGIQ
CCHHHHHHEEEEECCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHCCCCEEEEECCCCE
VLVAAGLTKGRTVTGHPHVCVEVERGGGTYSEKMAVRDGRMITAQSWKAHPEFYREVLAC
EHEECCCCCCCEEECCCCEEEEEECCCCCCHHHEEECCCEEEEECCCCCCHHHHHHHHHH
LGA
HCC
>Mature Secondary Structure 
SRKVLIVTGDGGDSYEALYGCQRFLEANWEPVIAAPARRRLHMVFHDSEPGWDTYVERP
CCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHHHHCCC
GHAVEARMAITAVASKDFAGIIILGGRAPEYLRNDTSLLSLVREFADQNKCVCAIGHGIQ
CCHHHHHHEEEEECCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHCCCCEEEEECCCCE
VLVAAGLTKGRTVTGHPHVCVEVERGGGTYSEKMAVRDGRMITAQSWKAHPEFYREVLAC
EHEECCCCCCCEEECCCCEEEEEECCCCCCHHHEEECCCEEEEECCCCCCHHHHHHHHHH
LGA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]