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The map label for this gene is selD1 [H]

Identifier: 116623813

GI number: 116623813

Start: 5978161

End: 5979081

Strand: Reverse

Name: selD1 [H]

Synonym: Acid_4725

Alternate gene names: 116623813

Gene position: 5979081-5978161 (Counterclockwise)

Preceding gene: 116623815

Following gene: 116623812

Centisome position: 60.0

GC content: 66.02

Gene sequence:

>921_bases
GTGCCGCGCTGGCCGGATGCGAATGTGCTGGTTGGGTTTGACACTGCCGACGATGCCGGCGTGTACAGGCTTTCGGCGGA
GCTCGCCCTGGTGCAGACGCTGGATTTCTTCACGCCGATTGTCGATGACCCGTACACCTTCGGCGCGATTGCGGCGGCGA
ATTCGCTGAGCGATGTCTATGCGATGGGCGGGCGGCCGATCTCGGCGCTCTCGATTCTGGCGTATCCCGCGAAGGGCGAT
ATGGACGATCTGGCGGCGATACTGAAGGGCGGCGCGGAAAAGATGCACGAGGCGTCGTGCTCGATACTGGGCGGCCACAG
CGTCAACGATGAAGAGGTCAAGTTCGGATACTCAGTGACCGGCACGGTGCATCCCGCTCGGGTGAAGGCCAATGCCGGGG
CGCGCGCGGGCGATGCGCTGGTGTTCACCAAGCGGCTGGGGACGGGCGTGATCGGAACGGCGCTAAAGCGCGGGATCGCG
CGGGATGAAGATGTGGCGGAAGCGACGGCATCCATGCTGACCCTGAATCGCACGGCCTGCGAGGAGATGCTGAGCTATGA
CGTGGGCGGCTGCACGGATGTGACCGGGTTCGGCCTGATCGGCCACGCACGCGAGATGGCGATTGCGAGCGGCGTCACGC
TGGAGATCGAGTCGGACGCGCTGCGGTTCCTGCCGGGCGCGGTGGAGTACGCGCGCGCCGGAGCGGTGCCGGCGGGGCTG
AAGAACAATCGCGAGTTCGCGGAATGCGCGGTGGAGATGGCGCGCGCTCTGCCGCGGGAAATCGAAGACTTGCTGTACGA
TCCGCAGACCTCGGGCGGGCTGCTGTACACGCTGCCGGAAGCCGAAGCGGCGAAGCTGAAGGTCGCGTGGCGCGTGGGAC
GGGTGCTGCCGCGCGGGGAAAGAGCAATGCGAATCATATGA

Upstream 100 bases:

>100_bases
GGACGAAACCACACAGGCCAGAAAATTAACTGCCCACGTCAAAGCCGCCGGTTGAGCGAGCAAGCTGAGTCCAAAGTTGT
TGGACAAGGTATTAGCCACG

Downstream 100 bases:

>100_bases
CGACGAAAGCTATGCACAACCCAATCATTGTCGCGCTGGACGTGGAATCGGCGGCGGAGGCCCGCGAGATGATCGCGCGC
ATCGGACCGCGAGTGAACTT

Product: selenophosphate synthase

Products: NA

Alternate protein names: Selenium donor protein 1; Selenophosphate synthase 1 [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MPRWPDANVLVGFDTADDAGVYRLSAELALVQTLDFFTPIVDDPYTFGAIAAANSLSDVYAMGGRPISALSILAYPAKGD
MDDLAAILKGGAEKMHEASCSILGGHSVNDEEVKFGYSVTGTVHPARVKANAGARAGDALVFTKRLGTGVIGTALKRGIA
RDEDVAEATASMLTLNRTACEEMLSYDVGGCTDVTGFGLIGHAREMAIASGVTLEIESDALRFLPGAVEYARAGAVPAGL
KNNREFAECAVEMARALPREIEDLLYDPQTSGGLLYTLPEAEAAKLKVAWRVGRVLPRGERAMRII

Sequences:

>Translated_306_residues
MPRWPDANVLVGFDTADDAGVYRLSAELALVQTLDFFTPIVDDPYTFGAIAAANSLSDVYAMGGRPISALSILAYPAKGD
MDDLAAILKGGAEKMHEASCSILGGHSVNDEEVKFGYSVTGTVHPARVKANAGARAGDALVFTKRLGTGVIGTALKRGIA
RDEDVAEATASMLTLNRTACEEMLSYDVGGCTDVTGFGLIGHAREMAIASGVTLEIESDALRFLPGAVEYARAGAVPAGL
KNNREFAECAVEMARALPREIEDLLYDPQTSGGLLYTLPEAEAAKLKVAWRVGRVLPRGERAMRII
>Mature_305_residues
PRWPDANVLVGFDTADDAGVYRLSAELALVQTLDFFTPIVDDPYTFGAIAAANSLSDVYAMGGRPISALSILAYPAKGDM
DDLAAILKGGAEKMHEASCSILGGHSVNDEEVKFGYSVTGTVHPARVKANAGARAGDALVFTKRLGTGVIGTALKRGIAR
DEDVAEATASMLTLNRTACEEMLSYDVGGCTDVTGFGLIGHAREMAIASGVTLEIESDALRFLPGAVEYARAGAVPAGLK
NNREFAECAVEMARALPREIEDLLYDPQTSGGLLYTLPEAEAAKLKVAWRVGRVLPRGERAMRII

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=312, Percent_Identity=31.0897435897436, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI15011844, Length=311, Percent_Identity=29.5819935691318, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1788062, Length=311, Percent_Identity=43.0868167202572, Blast_Score=220, Evalue=7e-59,
Organism=Caenorhabditis elegans, GI17543426, Length=299, Percent_Identity=29.4314381270903, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24653602, Length=308, Percent_Identity=32.7922077922078, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI24653604, Length=308, Percent_Identity=32.7922077922078, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI28574119, Length=282, Percent_Identity=26.241134751773, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28574118, Length=203, Percent_Identity=30.5418719211823, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 32368; Mature: 32237

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRWPDANVLVGFDTADDAGVYRLSAELALVQTLDFFTPIVDDPYTFGAIAAANSLSDVY
CCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AMGGRPISALSILAYPAKGDMDDLAAILKGGAEKMHEASCSILGGHSVNDEEVKFGYSVT
HCCCCCHHEEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCEEECCCCCCCCCEEEEEEEE
GTVHPARVKANAGARAGDALVFTKRLGTGVIGTALKRGIARDEDVAEATASMLTLNRTAC
CCCCCEEEECCCCCCCCCEEEEEHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
EEMLSYDVGGCTDVTGFGLIGHAREMAIASGVTLEIESDALRFLPGAVEYARAGAVPAGL
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHCCCHHHHHHCCCCCCCC
KNNREFAECAVEMARALPREIEDLLYDPQTSGGLLYTLPEAEAAKLKVAWRVGRVLPRGE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHEEHHHHHHHCCCCCC
RAMRII
CCEECC
>Mature Secondary Structure 
PRWPDANVLVGFDTADDAGVYRLSAELALVQTLDFFTPIVDDPYTFGAIAAANSLSDVY
CCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AMGGRPISALSILAYPAKGDMDDLAAILKGGAEKMHEASCSILGGHSVNDEEVKFGYSVT
HCCCCCHHEEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCEEECCCCCCCCCEEEEEEEE
GTVHPARVKANAGARAGDALVFTKRLGTGVIGTALKRGIARDEDVAEATASMLTLNRTAC
CCCCCEEEECCCCCCCCCEEEEEHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
EEMLSYDVGGCTDVTGFGLIGHAREMAIASGVTLEIESDALRFLPGAVEYARAGAVPAGL
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHCCCHHHHHHCCCCCCCC
KNNREFAECAVEMARALPREIEDLLYDPQTSGGLLYTLPEAEAAKLKVAWRVGRVLPRGE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHEEHHHHHHHCCCCCC
RAMRII
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11041351 [H]