| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623791
Identifier: 116623791
GI number: 116623791
Start: 5954687
End: 5956261
Strand: Reverse
Name: 116623791
Synonym: Acid_4703
Alternate gene names: NA
Gene position: 5956261-5954687 (Counterclockwise)
Preceding gene: 116623797
Following gene: 116623790
Centisome position: 59.77
GC content: 66.67
Gene sequence:
>1575_bases GTGGATGTTTCGGTCACGCCGCGACCGCAAGCCGGACCATTCTTTACGATCAGCGGCTACACGCCACTATCGGTACAGAT GATGATGCTGCGCTACTGGCTCAGCCATGGGAAACCGCGGCGGCTGAAGCAATTGCCGGCCGATGGCGACCTGATCATCG AAGAAACCGGCCGCGAGACGATTCCGGGCGGCACGCGGCTGGTGCGCTATTCGATCGGCAACGTGGTGTGGGGACGCGAA TCGCTGTGGCTGAACGACCGGCAGGAACTGGCGGCGGCGGCCACCTATGCGGGCAATCTTCCACTCGAGGCGGTGCGAGA CGAATACCGCGCGGCGCTGCCGCAGCTCATCCGCAGCGCGGTCGCCGATCGCATCCGGGAGCTCGGCACGATTCACGCCG ACTCGGGCGCAGACGTCGCAATCGTGAATGCGCTGCTGATCGATGGAAATGGCGGCGCGCCGATTGAAGGCGCGTCAGTG CTGGTGAAGGACGGGCGCATCGCGGCGGCGGGGCCGCGGGACCGGGTCGCGATTCCGCGCGGAGTCCGGACCATCGACGC CGGCGGCAAGACGCTGCTGCCGGGACTCTGGGAAATGCACGCGCATTTCGCTCAGGTGGAATACGGGCCGGCCTATCTCG CCGCCGGCGTGACCACGGCGCGCGATTGCGGAGGCGAGTTCGAATTCCTGACCGCTGTGCGCGACCTGATCAACAATCGC GGCGGCGCCGGTCCCCGCCTGATTCTGGCCGGCCTGGTGGACGGCAGCGGCGCCGGCACCTTCGGCGTCAACTGGGCCGA CACTCCGGAGCAGGGCCGCGCCATGGTGGCGAAGTACAAGGCGGCCGGGTTCGCCCAGATGAAGGTCTACAACCGCATCA AACCGGAGGTGCTCACGGCAATCGCGGCGGAGGCGCACCGCCAGGGCATGTCGGTCACCGGCCACGTACCCAACGGGATG ACCGCGTTCCAGGGAGTCGAAGCCGGCATGGACCAGATCAACCACCTCGGGCCTGTGCAGCAGGCGGTGCGAGCCGTGGG CCTCGAGAAGGCCGTGCAATTCTTCAAAGACCATCACACCGTGATCGACCCGACGCTCGCGTGGGGCGAACTGCTTTCGC GGCCGCGCGACGTGGAGATCACATCCTTCGAACCCGGGTTCTCGAAGGCGCCGTTCACGTTGACCTCGATGATCGGGACG GCGTCGGGGCAGGGCGCGCGCCTCGCCGAATCCTTCCGCATCGTGCGCGCGCTGGTGGAAGCCGGCGTGCCGGTAGTGGC CGGCACCGATAAGGCGGTGCCGGCGCACAGCCTGCATCGAGAGCTGGAGCTGTACCTTCAGGCAGGCGTGCCGGCGATGG AGGTGATCCGTCTGGCGACGATCGGTTCCGCGCGCGCGATGGGGATGGAGCGCGAAACGGGCTCGATCGAAGCCGGCAAA CGAGCGGACATGATCCTGGTAGAGGGGAATCCGCTGCAGGATTTCGCGAATCTGCGGAAGGTGGTGCGGGTGATCGCGAA TGGGCGCAGCTACGACCCTGCGAAATTGTGGGAAAGCGTAGGATTCAAGCCCTGA
Upstream 100 bases:
>100_bases GCGCGGTTCGACCGTCGCTCTGGACGCCACACTTGGGATGAAGGCCGACCTCACGCCGGAGAGGTTCGAGGCACACGGGC GGAGCTAGCGGCCCTTCAGC
Downstream 100 bases:
>100_bases AGAGTTTTGGGTTGACATTCGACCCGAAGGCGCGTATGCTCAGGTCGAATGGCCACCCAAGAAACCAATGACGAGCGGGT CCCGCTGCTGCAGGGCACGC
Product: amidohydrolase
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Amidohydrolase Family; Xaa-Pro Dipeptidase; Secreted Hydrolase; Amidohydrolase Domain Protein; Pro-Hyp Dipeptidase; Xaa-Pro Dipeptidase Family; WD-40-Like Repeat-Containing Amidohydrolase; M38 Family Protein; Hydrolase; WD40 Domain-Containing Protein Beta Propeller; LB Protein; Organophopsphate Acid Anhydrase; Periplasmic Component Of l Biopolymer Transport System; Metal-Dependent Hydrolase; WD40 Domain Protein Beta Propeller; Secreted Amidohydrolase; Exported Amidohydrolase Family Protein; Imidazolonepropionase; Metal Dependent Amidohydrolase; Prolidase; Amidohydrolase-Family Protein; Dipeptidase; Endoribonuclease L-PSP; WD40-Like Repeat/Amidohydrolase Domain Protein; ABC-2 Type Transporter; Xaa-Arg/Lys Peptidase; Amidohydrolase Domain-Containing Protein; Membrane Anchor Amidohydrolase; Aryldialkylphosphatase Related Protein; Parathion Hydrolase
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MDVSVTPRPQAGPFFTISGYTPLSVQMMMLRYWLSHGKPRRLKQLPADGDLIIEETGRETIPGGTRLVRYSIGNVVWGRE SLWLNDRQELAAAATYAGNLPLEAVRDEYRAALPQLIRSAVADRIRELGTIHADSGADVAIVNALLIDGNGGAPIEGASV LVKDGRIAAAGPRDRVAIPRGVRTIDAGGKTLLPGLWEMHAHFAQVEYGPAYLAAGVTTARDCGGEFEFLTAVRDLINNR GGAGPRLILAGLVDGSGAGTFGVNWADTPEQGRAMVAKYKAAGFAQMKVYNRIKPEVLTAIAAEAHRQGMSVTGHVPNGM TAFQGVEAGMDQINHLGPVQQAVRAVGLEKAVQFFKDHHTVIDPTLAWGELLSRPRDVEITSFEPGFSKAPFTLTSMIGT ASGQGARLAESFRIVRALVEAGVPVVAGTDKAVPAHSLHRELELYLQAGVPAMEVIRLATIGSARAMGMERETGSIEAGK RADMILVEGNPLQDFANLRKVVRVIANGRSYDPAKLWESVGFKP
Sequences:
>Translated_524_residues MDVSVTPRPQAGPFFTISGYTPLSVQMMMLRYWLSHGKPRRLKQLPADGDLIIEETGRETIPGGTRLVRYSIGNVVWGRE SLWLNDRQELAAAATYAGNLPLEAVRDEYRAALPQLIRSAVADRIRELGTIHADSGADVAIVNALLIDGNGGAPIEGASV LVKDGRIAAAGPRDRVAIPRGVRTIDAGGKTLLPGLWEMHAHFAQVEYGPAYLAAGVTTARDCGGEFEFLTAVRDLINNR GGAGPRLILAGLVDGSGAGTFGVNWADTPEQGRAMVAKYKAAGFAQMKVYNRIKPEVLTAIAAEAHRQGMSVTGHVPNGM TAFQGVEAGMDQINHLGPVQQAVRAVGLEKAVQFFKDHHTVIDPTLAWGELLSRPRDVEITSFEPGFSKAPFTLTSMIGT ASGQGARLAESFRIVRALVEAGVPVVAGTDKAVPAHSLHRELELYLQAGVPAMEVIRLATIGSARAMGMERETGSIEAGK RADMILVEGNPLQDFANLRKVVRVIANGRSYDPAKLWESVGFKP >Mature_524_residues MDVSVTPRPQAGPFFTISGYTPLSVQMMMLRYWLSHGKPRRLKQLPADGDLIIEETGRETIPGGTRLVRYSIGNVVWGRE SLWLNDRQELAAAATYAGNLPLEAVRDEYRAALPQLIRSAVADRIRELGTIHADSGADVAIVNALLIDGNGGAPIEGASV LVKDGRIAAAGPRDRVAIPRGVRTIDAGGKTLLPGLWEMHAHFAQVEYGPAYLAAGVTTARDCGGEFEFLTAVRDLINNR GGAGPRLILAGLVDGSGAGTFGVNWADTPEQGRAMVAKYKAAGFAQMKVYNRIKPEVLTAIAAEAHRQGMSVTGHVPNGM TAFQGVEAGMDQINHLGPVQQAVRAVGLEKAVQFFKDHHTVIDPTLAWGELLSRPRDVEITSFEPGFSKAPFTLTSMIGT ASGQGARLAESFRIVRALVEAGVPVVAGTDKAVPAHSLHRELELYLQAGVPAMEVIRLATIGSARAMGMERETGSIEAGK RADMILVEGNPLQDFANLRKVVRVIANGRSYDPAKLWESVGFKP
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56117; Mature: 56117
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVSVTPRPQAGPFFTISGYTPLSVQMMMLRYWLSHGKPRRLKQLPADGDLIIEETGRET CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCC IPGGTRLVRYSIGNVVWGRESLWLNDRQELAAAATYAGNLPLEAVRDEYRAALPQLIRSA CCCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VADRIRELGTIHADSGADVAIVNALLIDGNGGAPIEGASVLVKDGRIAAAGPRDRVAIPR HHHHHHHHCCEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCEEEECCCCCCCCCCC GVRTIDAGGKTLLPGLWEMHAHFAQVEYGPAYLAAGVTTARDCGGEFEFLTAVRDLINNR CCEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHCC GGAGPRLILAGLVDGSGAGTFGVNWADTPEQGRAMVAKYKAAGFAQMKVYNRIKPEVLTA CCCCCEEEEEEEECCCCCCCCCCCCCCCCHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHH IAAEAHRQGMSVTGHVPNGMTAFQGVEAGMDQINHLGPVQQAVRAVGLEKAVQFFKDHHT HHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC VIDPTLAWGELLSRPRDVEITSFEPGFSKAPFTLTSMIGTASGQGARLAESFRIVRALVE EECCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH AGVPVVAGTDKAVPAHSLHRELELYLQAGVPAMEVIRLATIGSARAMGMERETGSIEAGK CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCC RADMILVEGNPLQDFANLRKVVRVIANGRSYDPAKLWESVGFKP CCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MDVSVTPRPQAGPFFTISGYTPLSVQMMMLRYWLSHGKPRRLKQLPADGDLIIEETGRET CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCC IPGGTRLVRYSIGNVVWGRESLWLNDRQELAAAATYAGNLPLEAVRDEYRAALPQLIRSA CCCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VADRIRELGTIHADSGADVAIVNALLIDGNGGAPIEGASVLVKDGRIAAAGPRDRVAIPR HHHHHHHHCCEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCEEEECCCCCCCCCCC GVRTIDAGGKTLLPGLWEMHAHFAQVEYGPAYLAAGVTTARDCGGEFEFLTAVRDLINNR CCEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHCC GGAGPRLILAGLVDGSGAGTFGVNWADTPEQGRAMVAKYKAAGFAQMKVYNRIKPEVLTA CCCCCEEEEEEEECCCCCCCCCCCCCCCCHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHH IAAEAHRQGMSVTGHVPNGMTAFQGVEAGMDQINHLGPVQQAVRAVGLEKAVQFFKDHHT HHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC VIDPTLAWGELLSRPRDVEITSFEPGFSKAPFTLTSMIGTASGQGARLAESFRIVRALVE EECCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH AGVPVVAGTDKAVPAHSLHRELELYLQAGVPAMEVIRLATIGSARAMGMERETGSIEAGK CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCC RADMILVEGNPLQDFANLRKVVRVIANGRSYDPAKLWESVGFKP CCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA