| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is macB1 [H]
Identifier: 116623788
GI number: 116623788
Start: 5949029
End: 5951569
Strand: Direct
Name: macB1 [H]
Synonym: Acid_4700
Alternate gene names: 116623788
Gene position: 5949029-5951569 (Clockwise)
Preceding gene: 116623787
Following gene: 116623792
Centisome position: 59.7
GC content: 63.79
Gene sequence:
>2541_bases ATGGATCGAATGGTTGGCGAGCGAATGGCGGACGAGCCCGAAGCGCTGCTGTGGCTGCCTCTGCTGGCCGATGTGTTGCG GAATGCCCCACGCGAGCATCTCCACATCCTGAGGCGGGATCTTCACCACAGCCTCCGCCTTTTCGCCAGGGCGCCCGGAT TCACGGCAACCGCGCTCTTGGCGCTAGCCCTGGGAATCGGGGCGGCGGTGACGATCTTTACTTTGATCGACACGGTGTTG ATTCGTTCGCTTCCCTTTGGCGAAGCCGAACGTTTGGTCTACATGTGGACGCCCCTGCCCCGGTATCACTCTCTGCCGCG CGAGTTGGGCCCGTCATTCGCAGATGTACTGGCGTGGCGATCGGCCGGCAAATCCTTCGCCGGCATCACGGCCCTGGAGC AAAGAACCATGACCGTCAACACGGGCGGCGATCCGATCCTGGTCCCCGGTGCAATCGTGCTGGGGAACTTCTTCGAAATC ATGCGGGCGGTTCCGCTGATGGGCCGCACCATCGACGTCAATGACGATCGTCCGGGCAAGGATCGGGTTGCAGTGATCAG TTATGCGTTTTGGAGTTCCCGGTTCAACCGGGATCCGGGAGTGCTCGGAAAAGGACTGCAACTGGGTGGGCGCAGCCATC GCATTATCGGCGTCATGCCTCCCGAATTCGTGTATCCGCACGCGAACGATTTTCCTCTGGCGTCCGCCAGCCTGAAGCGT ACCGATCTCTGGGTTCCCGCCGGGCTTTCGGCGCAACAGGAAGCCAACCGGATGATGACCTGCGACGCCGCCATCGGCCG GCTTCGGCCGGGCGTGAGCCTGGGCCGGGCGCAGGCGGAAATGTCGGCCCTCCAAAGCCGCCTCGATCCCCTGAATCTTC CCGAGATGCGCGGCACGCAATCGCTGCTGGTTCCATTGATCGAAACAGCGGTGGGGCCGGTGCGCGGCCTGATGCGGCTG CTTGCCGGAGCGGTGATTCTGGTTCTGTTGATCGCCTGCGGCAATGTGGCCAACCTTCTGATCGCGCGCGCCGCTACTCG CGAGCATGAAATGGGAGTGCGGACGGCTCTGGGCGCTCCCCGATCCAGGCTGGTCCGTCAGATTTTGACAGAATCGCTGC TCCTGTCCCTCACCGGCGGGGCGCTGGGCGCCTTCCTGTGCGTGGCAGCGGTGCGGGTACTGGCGAGGATGAACCCGGGC GATATTCCCCGCTTCGATGAGATCTCCGTCAACTGGCGCGTGCTTCTCTTCGCTCTTCTGATTTCAGTGATCACCGGAAT CGTGTTCGGCGCATTGCCGGCGCTTGCCTCGTCGAGGACCAACATTGTGGATCTGTTGCGGGAGGGCGGCGGCCGCGGAA TCGCCGGGGCCTCGACGCGCGTGCGCTACGGCCTGGTGGTGGCGGATGTCGCTCTGGCGGTTGTGCTGCTTGGAGGCGCT GTCCTGTTCATTCGAAGCTACCTATACGTGCAAGGCGAGGAGAAAGGCTTCGCGCCCTCCACGCTGACCATGAGTCTCAC CGCCGATCTCCAGTCCCGCGTGCCGCCCGCAAGAATCATGGCGATGTCGCGGACAGCCTTGGAACGGGTCGCGGCGCTGC CGGGTGTGGTTTCCGCGGGCGCCACCAACACGCTGCCGCTCAGTCACCACGAGAGCACTTCGACATTTCGGGTGGAGGGC TATGACAACCGTCCCAATCAGACCGCGGGATGGCGTCAGGTAGCAGGCGATTTCTTTGGCGCCATGCAGATTCCCCTGAT TGCGGGGCGATACCTGACTTCAGACGATATACCGGATCAGCCGGCGTCCGTTCCCCACGCGGTGGTTGTGAATGAAACCT TCGCCAGAATGTACTTCCCTGGACGCAGCGCCATTGGCGGCCGCGTGCAGCGCGGCGCGCCGGGAGCGGTGTGGTCCACG ATTGTCGGCGTGGTGGCCGACGTGCGGCATTCCAACCTCGAAACACCGCCTACGCCGACTTTATACCAGCCTTCCTGGTC GAATGTGTCGTCTCTCGCCATCCGGACCACACTGCCGCCGGATGCCATGGTTTCCGCGGTGCGCCACGCGGTTCGAGAGT CCGGGTTGCCATTCCTGCTGGCGGACATTCAGACCATGCGCGACCGAACCAGCGAAGCCGGCGCGCGAAGGCGCTTCCAG ACGGTGCTGCTGGCGGCCTTTGCCGCGATCGCCGTGTTTCTGGCCCTGGTAGGGTTGTACGGGCTACTCTCTTACGCGGT ACGGCAGCGGACGGCGGAGATTGGTGTGCGGATGGCGTTGGGCGCGCAACGTTCGCAGGTGGTGGGCATGGTGCTCCGGG ACGGTCTGCTGTTGACCGCGGCGGGTCTTCTCATAGGGCTGCCCGTGGCAGGTACGGTGGCTCGCTGGAGTGCCAGCCTG CTCTATGGAATCCACGTCCTCGACCCGGTCACATTTATTGCGGTACCGGTTCTCATGATCGCTGCCGCAGCCCTGGCGTG CGTTTTGCCTGCGTGGAAGGCTTCACGGGTCGATCCGGTCAGTTCGCTGCGCCATCAGTAG
Upstream 100 bases:
>100_bases CAAGCGAGGATTTATGGCCTGGCGCCCAAACTCACGTAGTATCTATCGCACTCTCTTACTGGCGTACCCGTCCGAGTTTC GCGAGGAATATGGCGCGGAA
Downstream 100 bases:
>100_bases GGTATCGCAGCGGCCACTTCGGCGGATCGAGGAATGCACCGCATTTCAGCAGAATGCTAATCGCAGCGCAGCGCCTGCAG CGGATCCACGCGCAGCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MDRMVGERMADEPEALLWLPLLADVLRNAPREHLHILRRDLHHSLRLFARAPGFTATALLALALGIGAAVTIFTLIDTVL IRSLPFGEAERLVYMWTPLPRYHSLPRELGPSFADVLAWRSAGKSFAGITALEQRTMTVNTGGDPILVPGAIVLGNFFEI MRAVPLMGRTIDVNDDRPGKDRVAVISYAFWSSRFNRDPGVLGKGLQLGGRSHRIIGVMPPEFVYPHANDFPLASASLKR TDLWVPAGLSAQQEANRMMTCDAAIGRLRPGVSLGRAQAEMSALQSRLDPLNLPEMRGTQSLLVPLIETAVGPVRGLMRL LAGAVILVLLIACGNVANLLIARAATREHEMGVRTALGAPRSRLVRQILTESLLLSLTGGALGAFLCVAAVRVLARMNPG DIPRFDEISVNWRVLLFALLISVITGIVFGALPALASSRTNIVDLLREGGGRGIAGASTRVRYGLVVADVALAVVLLGGA VLFIRSYLYVQGEEKGFAPSTLTMSLTADLQSRVPPARIMAMSRTALERVAALPGVVSAGATNTLPLSHHESTSTFRVEG YDNRPNQTAGWRQVAGDFFGAMQIPLIAGRYLTSDDIPDQPASVPHAVVVNETFARMYFPGRSAIGGRVQRGAPGAVWST IVGVVADVRHSNLETPPTPTLYQPSWSNVSSLAIRTTLPPDAMVSAVRHAVRESGLPFLLADIQTMRDRTSEAGARRRFQ TVLLAAFAAIAVFLALVGLYGLLSYAVRQRTAEIGVRMALGAQRSQVVGMVLRDGLLLTAAGLLIGLPVAGTVARWSASL LYGIHVLDPVTFIAVPVLMIAAAALACVLPAWKASRVDPVSSLRHQ
Sequences:
>Translated_846_residues MDRMVGERMADEPEALLWLPLLADVLRNAPREHLHILRRDLHHSLRLFARAPGFTATALLALALGIGAAVTIFTLIDTVL IRSLPFGEAERLVYMWTPLPRYHSLPRELGPSFADVLAWRSAGKSFAGITALEQRTMTVNTGGDPILVPGAIVLGNFFEI MRAVPLMGRTIDVNDDRPGKDRVAVISYAFWSSRFNRDPGVLGKGLQLGGRSHRIIGVMPPEFVYPHANDFPLASASLKR TDLWVPAGLSAQQEANRMMTCDAAIGRLRPGVSLGRAQAEMSALQSRLDPLNLPEMRGTQSLLVPLIETAVGPVRGLMRL LAGAVILVLLIACGNVANLLIARAATREHEMGVRTALGAPRSRLVRQILTESLLLSLTGGALGAFLCVAAVRVLARMNPG DIPRFDEISVNWRVLLFALLISVITGIVFGALPALASSRTNIVDLLREGGGRGIAGASTRVRYGLVVADVALAVVLLGGA VLFIRSYLYVQGEEKGFAPSTLTMSLTADLQSRVPPARIMAMSRTALERVAALPGVVSAGATNTLPLSHHESTSTFRVEG YDNRPNQTAGWRQVAGDFFGAMQIPLIAGRYLTSDDIPDQPASVPHAVVVNETFARMYFPGRSAIGGRVQRGAPGAVWST IVGVVADVRHSNLETPPTPTLYQPSWSNVSSLAIRTTLPPDAMVSAVRHAVRESGLPFLLADIQTMRDRTSEAGARRRFQ TVLLAAFAAIAVFLALVGLYGLLSYAVRQRTAEIGVRMALGAQRSQVVGMVLRDGLLLTAAGLLIGLPVAGTVARWSASL LYGIHVLDPVTFIAVPVLMIAAAALACVLPAWKASRVDPVSSLRHQ >Mature_846_residues MDRMVGERMADEPEALLWLPLLADVLRNAPREHLHILRRDLHHSLRLFARAPGFTATALLALALGIGAAVTIFTLIDTVL IRSLPFGEAERLVYMWTPLPRYHSLPRELGPSFADVLAWRSAGKSFAGITALEQRTMTVNTGGDPILVPGAIVLGNFFEI MRAVPLMGRTIDVNDDRPGKDRVAVISYAFWSSRFNRDPGVLGKGLQLGGRSHRIIGVMPPEFVYPHANDFPLASASLKR TDLWVPAGLSAQQEANRMMTCDAAIGRLRPGVSLGRAQAEMSALQSRLDPLNLPEMRGTQSLLVPLIETAVGPVRGLMRL LAGAVILVLLIACGNVANLLIARAATREHEMGVRTALGAPRSRLVRQILTESLLLSLTGGALGAFLCVAAVRVLARMNPG DIPRFDEISVNWRVLLFALLISVITGIVFGALPALASSRTNIVDLLREGGGRGIAGASTRVRYGLVVADVALAVVLLGGA VLFIRSYLYVQGEEKGFAPSTLTMSLTADLQSRVPPARIMAMSRTALERVAALPGVVSAGATNTLPLSHHESTSTFRVEG YDNRPNQTAGWRQVAGDFFGAMQIPLIAGRYLTSDDIPDQPASVPHAVVVNETFARMYFPGRSAIGGRVQRGAPGAVWST IVGVVADVRHSNLETPPTPTLYQPSWSNVSSLAIRTTLPPDAMVSAVRHAVRESGLPFLLADIQTMRDRTSEAGARRRFQ TVLLAAFAAIAVFLALVGLYGLLSYAVRQRTAEIGVRMALGAQRSQVVGMVLRDGLLLTAAGLLIGLPVAGTVARWSASL LYGIHVLDPVTFIAVPVLMIAAAALACVLPAWKASRVDPVSSLRHQ
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=298, Percent_Identity=25.1677852348993, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 90749; Mature: 90749
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRMVGERMADEPEALLWLPLLADVLRNAPREHLHILRRDLHHSLRLFARAPGFTATALL CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ALALGIGAAVTIFTLIDTVLIRSLPFGEAERLVYMWTPLPRYHSLPRELGPSFADVLAWR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHCCHHHHCCHHHHHHHHH SAGKSFAGITALEQRTMTVNTGGDPILVPGAIVLGNFFEIMRAVPLMGRTIDVNDDRPGK HCCCCHHHHHHHHHCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC DRVAVISYAFWSSRFNRDPGVLGKGLQLGGRSHRIIGVMPPEFVYPHANDFPLASASLKR CCEEEEEHHHHHHHCCCCCCCCCCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC TDLWVPAGLSAQQEANRMMTCDAAIGRLRPGVSLGRAQAEMSALQSRLDPLNLPEMRGTQ CCEECCCCCCHHHHHCHHEEHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH SLLVPLIETAVGPVRGLMRLLAGAVILVLLIACGNVANLLIARAATREHEMGVRTALGAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCC RSRLVRQILTESLLLSLTGGALGAFLCVAAVRVLARMNPGDIPRFDEISVNWRVLLFALL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH ISVITGIVFGALPALASSRTNIVDLLREGGGRGIAGASTRVRYGLVVADVALAVVLLGGA HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VLFIRSYLYVQGEEKGFAPSTLTMSLTADLQSRVPPARIMAMSRTALERVAALPGVVSAG HHHHHHHHHEECCCCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCC ATNTLPLSHHESTSTFRVEGYDNRPNQTAGWRQVAGDFFGAMQIPLIAGRYLTSDDIPDQ CCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PASVPHAVVVNETFARMYFPGRSAIGGRVQRGAPGAVWSTIVGVVADVRHSNLETPPTPT CCCCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC LYQPSWSNVSSLAIRTTLPPDAMVSAVRHAVRESGLPFLLADIQTMRDRTSEAGARRRFQ EECCCCCCHHHEEEEECCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH TVLLAAFAAIAVFLALVGLYGLLSYAVRQRTAEIGVRMALGAQRSQVVGMVLRDGLLLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHH AGLLIGLPVAGTVARWSASLLYGIHVLDPVTFIAVPVLMIAAAALACVLPAWKASRVDPV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SSLRHQ HHHCCC >Mature Secondary Structure MDRMVGERMADEPEALLWLPLLADVLRNAPREHLHILRRDLHHSLRLFARAPGFTATALL CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ALALGIGAAVTIFTLIDTVLIRSLPFGEAERLVYMWTPLPRYHSLPRELGPSFADVLAWR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHCCHHHHCCHHHHHHHHH SAGKSFAGITALEQRTMTVNTGGDPILVPGAIVLGNFFEIMRAVPLMGRTIDVNDDRPGK HCCCCHHHHHHHHHCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC DRVAVISYAFWSSRFNRDPGVLGKGLQLGGRSHRIIGVMPPEFVYPHANDFPLASASLKR CCEEEEEHHHHHHHCCCCCCCCCCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC TDLWVPAGLSAQQEANRMMTCDAAIGRLRPGVSLGRAQAEMSALQSRLDPLNLPEMRGTQ CCEECCCCCCHHHHHCHHEEHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH SLLVPLIETAVGPVRGLMRLLAGAVILVLLIACGNVANLLIARAATREHEMGVRTALGAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCC RSRLVRQILTESLLLSLTGGALGAFLCVAAVRVLARMNPGDIPRFDEISVNWRVLLFALL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH ISVITGIVFGALPALASSRTNIVDLLREGGGRGIAGASTRVRYGLVVADVALAVVLLGGA HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VLFIRSYLYVQGEEKGFAPSTLTMSLTADLQSRVPPARIMAMSRTALERVAALPGVVSAG HHHHHHHHHEECCCCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCC ATNTLPLSHHESTSTFRVEGYDNRPNQTAGWRQVAGDFFGAMQIPLIAGRYLTSDDIPDQ CCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PASVPHAVVVNETFARMYFPGRSAIGGRVQRGAPGAVWSTIVGVVADVRHSNLETPPTPT CCCCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC LYQPSWSNVSSLAIRTTLPPDAMVSAVRHAVRESGLPFLLADIQTMRDRTSEAGARRRFQ EECCCCCCHHHEEEEECCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH TVLLAAFAAIAVFLALVGLYGLLSYAVRQRTAEIGVRMALGAQRSQVVGMVLRDGLLLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHH AGLLIGLPVAGTVARWSASLLYGIHVLDPVTFIAVPVLMIAAAALACVLPAWKASRVDPV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SSLRHQ HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA