| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623778
Identifier: 116623778
GI number: 116623778
Start: 5940127
End: 5940966
Strand: Direct
Name: 116623778
Synonym: Acid_4690
Alternate gene names: NA
Gene position: 5940127-5940966 (Clockwise)
Preceding gene: 116623777
Following gene: 116623781
Centisome position: 59.61
GC content: 60.48
Gene sequence:
>840_bases ATGTTCATGCTCAGAAGATCAACGCGATTTCTCGCTCTGCTCCCGCTGCTCCTGGCTGCCTCCCCGGCTCACGCCGGAAT GACGAGCGTCGATTTATTCAGGAACATTGAATACTCTCAGAACACTGCCGCGCCTCCTTCAACGGAGACCGGCACGTTCG TTGCTTTCCGGGCCTTCACCCAGAACGCGTCCGACTTTCAAACCATGAACGTGCAATATTCCGGGCCCACCAGGTTTCTC ACCCTGTCTGGCACAACGTGGAGTTACAGTTCGCCTTTCCTGGCCGACAAAGCCGCGATGGATGCAGCCTACCCGATGGG CGTCTACCAGTACAACGCCATCGGCACCATCCCCCAGGCCGCCGAAATCAATTACACCGCCGACGCCTACACCGACGATA TCCCGGCTTTCACGGCTGCCACGTTTCTGGCGTTGCAGGGCATGGACCCGAGCACCGCGTTCGCGCTCCACTTCAATGCG TTCGCGCCGAACGCCTCAGCGACCACTGCAGGGACGTATCTGTCAGTGTTTGGAACCTCGTTCAGCGCAGCGCTTTCCAA CTCCGCCACGTCTGCCGTGCTGGCCGCCAACACGCTGCTGCCCAATACGACCTACACCGTGCAGTTAGACTTCTCGGACA GGATCGGCGGTATTAGCGGATACCTCGGCTTTAATATTCCTACGACGATCGGTTTCGATCGGCGCACGGACATCACCTTC ACAACCGGCGACATCGGCGGGGCCGGTGTTCCGGAGCCGGGCAGCCTATCGCTGTCCGCTCTGGGCGCAGGCCTGCTGGC GTTCGGCATCCGGCGGCGCATCGTGCGCAAGTCCGTTTAG
Upstream 100 bases:
>100_bases AGCTCGGAGCGCCCGTGAGTAGGTAGCTGGCGAAACGCATAGTAGTACTGTGGCTTGACAATCCGGAGCAGGCTATTCAG ACTGACGTAAACACCGGAAA
Downstream 100 bases:
>100_bases CTACTTGCTTAAGACCAGTATGCCCCAAGGCTTCTCCCCGACCTTCACCTTGAATACCGTGCCCGTGGCCACGTTTCTCG TCGGGGGAGAGCGCGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MFMLRRSTRFLALLPLLLAASPAHAGMTSVDLFRNIEYSQNTAAPPSTETGTFVAFRAFTQNASDFQTMNVQYSGPTRFL TLSGTTWSYSSPFLADKAAMDAAYPMGVYQYNAIGTIPQAAEINYTADAYTDDIPAFTAATFLALQGMDPSTAFALHFNA FAPNASATTAGTYLSVFGTSFSAALSNSATSAVLAANTLLPNTTYTVQLDFSDRIGGISGYLGFNIPTTIGFDRRTDITF TTGDIGGAGVPEPGSLSLSALGAGLLAFGIRRRIVRKSV
Sequences:
>Translated_279_residues MFMLRRSTRFLALLPLLLAASPAHAGMTSVDLFRNIEYSQNTAAPPSTETGTFVAFRAFTQNASDFQTMNVQYSGPTRFL TLSGTTWSYSSPFLADKAAMDAAYPMGVYQYNAIGTIPQAAEINYTADAYTDDIPAFTAATFLALQGMDPSTAFALHFNA FAPNASATTAGTYLSVFGTSFSAALSNSATSAVLAANTLLPNTTYTVQLDFSDRIGGISGYLGFNIPTTIGFDRRTDITF TTGDIGGAGVPEPGSLSLSALGAGLLAFGIRRRIVRKSV >Mature_279_residues MFMLRRSTRFLALLPLLLAASPAHAGMTSVDLFRNIEYSQNTAAPPSTETGTFVAFRAFTQNASDFQTMNVQYSGPTRFL TLSGTTWSYSSPFLADKAAMDAAYPMGVYQYNAIGTIPQAAEINYTADAYTDDIPAFTAATFLALQGMDPSTAFALHFNA FAPNASATTAGTYLSVFGTSFSAALSNSATSAVLAANTLLPNTTYTVQLDFSDRIGGISGYLGFNIPTTIGFDRRTDITF TTGDIGGAGVPEPGSLSLSALGAGLLAFGIRRRIVRKSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29520; Mature: 29520
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMLRRSTRFLALLPLLLAASPAHAGMTSVDLFRNIEYSQNTAAPPSTETGTFVAFRAFT CEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC QNASDFQTMNVQYSGPTRFLTLSGTTWSYSSPFLADKAAMDAAYPMGVYQYNAIGTIPQA CCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCC AEINYTADAYTDDIPAFTAATFLALQGMDPSTAFALHFNAFAPNASATTAGTYLSVFGTS CEEEEECCCCCCCCCHHHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCC FSAALSNSATSAVLAANTLLPNTTYTVQLDFSDRIGGISGYLGFNIPTTIGFDRRTDITF HHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCEEECCCCCCCEEE TTGDIGGAGVPEPGSLSLSALGAGLLAFGIRRRIVRKSV EECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFMLRRSTRFLALLPLLLAASPAHAGMTSVDLFRNIEYSQNTAAPPSTETGTFVAFRAFT CEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC QNASDFQTMNVQYSGPTRFLTLSGTTWSYSSPFLADKAAMDAAYPMGVYQYNAIGTIPQA CCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCC AEINYTADAYTDDIPAFTAATFLALQGMDPSTAFALHFNAFAPNASATTAGTYLSVFGTS CEEEEECCCCCCCCCHHHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCC FSAALSNSATSAVLAANTLLPNTTYTVQLDFSDRIGGISGYLGFNIPTTIGFDRRTDITF HHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCEEECCCCCCCEEE TTGDIGGAGVPEPGSLSLSALGAGLLAFGIRRRIVRKSV EECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA