| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623770
Identifier: 116623770
GI number: 116623770
Start: 5921048
End: 5922976
Strand: Reverse
Name: 116623770
Synonym: Acid_4682
Alternate gene names: NA
Gene position: 5922976-5921048 (Counterclockwise)
Preceding gene: 116623771
Following gene: 116623769
Centisome position: 59.43
GC content: 63.25
Gene sequence:
>1929_bases ATGAAACGCTTGCTTCTGGCGGCCGTGATGATGGCGGCTGCGAACCATGCGGCAGAGCGGTTCGATGCAAAACTCGATTC CGAACAGAAAATGCTGCAGGCGCTGGACCGCCTGACATTCGGCGCGCGGCCGGGTGATCTGGAAGAGGTTCGAAGGCTGG GAGTCGAGAAGTGGATCGAACTCCAACTGCATCCGGTGCGGATTGCCGAGAACCCCGCGCTGGAAGGCAGACTAAAACCG CTGGCGACCATCCGGATGGAGCCGGCCGAGGTAATCACAAAATTCTTTCCGCAATTTCCGCCGGGATTTGCGCGGGCGAA CCGGGTCAGTCTGAACGAACTGCTGCCGCCCGATCAGTTCCGAAAGGTTCTGAGCGGCACGGCGGAGGAGCGGCGCGCGG CGATAATGGCGCTGGAGCCCGAGAAGCGGATGAAGGTGCTGGCGCAGGTGCCGCCCAACGTAGTGGATGGCCTGCCGGAC CTTCAAAAGGAACAGGTTGCGGCGCGGCAGCTACAACAGGAAGAAGCGCGGATGGAGATGAGGAAGCTGCGGCCGCCGCT CAACGAACTGCTGGAGCCGAACCAGGTGCAAATTGCGCTGCACGGCCCGGAGGAGCAGCGTGCGGCTCTGTTCGCATCTC TTGATTCCGACAAGCGCCAGAAGCTGGCGGCGGCACTGCCTATGGAGGCGCTTGCCAACCAGCCCGAACTTCGGCGCCTG GGCGTGATGACGCGCACTCCGCAGCAAGTAGTGATCGGCGATCTGCGGGAGGCGAAGCTGTTCCGCGCGATCTACTCCAA CCGGCAGTTGGAGGAAGTGCTGGCGGACTTCTGGTTCAACCACTTCAATGTATTCGAGGGTAAGGACCGCGAGCGCTCCA TGCTGGCGAGCTATGAGCGCGATGCGATCCGGCCGCACGTGCTGGGCAAATTCAAGGATCTGCTGCTGGCGACGGCGCGG CATCCGGCGATGCTTTACTACCTGGACAACTGGCAATCCATGTCGGGGGACTTGTTCGAGATCGGTCCATTCGCGCCGGG TCCGTTCGGGCCGCCGCAGCCCTTCGGCCGGCAGGCGCACGGCCTGAATGAGAATTACGGGCGCGAACTGCTGGAGCTGC ACACGATGGGCGTCAACGGCGGGTACACGCAGCAGGACGTGATCGCGGTGGCGCGGTGCTTTACGGGCTGGACGATCCGG CAGCCGAACAAGTCGCCCGAATTCGCGTTCGCGGTGTTCATGCACGATGGCGGAGAGAAGACCGTGCTGGGGCACAAGAT CGCGGCGGGAGGGGGCGAGCAGGACGGCTTGCAGGTGATCGACATTCTGGCGCATCATCCCTCGACGGCACATTTTATTT CGATGAAGCTGGCGCGTCGATTCGTGGCCGACGACCCTCCGGCGGCGCTGGTGGAACGGATGGCGCGAACCTTCGCCAAA ACGGATGGGGATCTGCGCGCGGTGATGGAGACGATGTTCACGTCGCGCGAATTTTTCTCGGAGGGGGCGCGGCAGGCGAA GGTGAAGTCGCCGCTCGAGATGGTGGTGAGCGCGGCGCGGTCGCTGGACCTGAAGCCGACCGACACCTTCACGCTGGTGC AGAAGGTGGCGGACATGGGTGAGCCGCTGTATTCGAAGGAGTCGCCCAACGGATACAAAGACACGGGGGAATTGTGGCTG AACACGGCGAGCGTGATGGCGCGGATCGAGTTCGCCGCTGCGCTGGCGAAGGGACAGATACCGGGGGCGCCGGTGGACAG CGCACGATTCGCCGGGAAGACGGCGGCCGCGATTTCGCACGAGTTGCTCAATCGCGAGCCCTCCAAACAAACACTAACGG CGATCGAGCAGGGTTTGCAGGGCAGGCAGCCGAGCGCCGAGGTCATCGCGGGGTTGGTGATCAGCTCGCCGGAATTTCAA AGGAGATAG
Upstream 100 bases:
>100_bases GTACCGTTTCCGTGCGGAATCGCTCATAGGCGTTATCAACTAAAGGACGGGTTCGAGCGTCAAATGCGGTGTAGACTGAT CGCGGAGGGGGGCGTCATAC
Downstream 100 bases:
>100_bases AAGTATGCTGACGAGGCGTTATTTTCTGCGCGGATCGGCAATGGCGATGGCCGGCGCGGGCGCGGTGCCATTTTGGCTGG GGCGTGCGGCGGCGACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MKRLLLAAVMMAAANHAAERFDAKLDSEQKMLQALDRLTFGARPGDLEEVRRLGVEKWIELQLHPVRIAENPALEGRLKP LATIRMEPAEVITKFFPQFPPGFARANRVSLNELLPPDQFRKVLSGTAEERRAAIMALEPEKRMKVLAQVPPNVVDGLPD LQKEQVAARQLQQEEARMEMRKLRPPLNELLEPNQVQIALHGPEEQRAALFASLDSDKRQKLAAALPMEALANQPELRRL GVMTRTPQQVVIGDLREAKLFRAIYSNRQLEEVLADFWFNHFNVFEGKDRERSMLASYERDAIRPHVLGKFKDLLLATAR HPAMLYYLDNWQSMSGDLFEIGPFAPGPFGPPQPFGRQAHGLNENYGRELLELHTMGVNGGYTQQDVIAVARCFTGWTIR QPNKSPEFAFAVFMHDGGEKTVLGHKIAAGGGEQDGLQVIDILAHHPSTAHFISMKLARRFVADDPPAALVERMARTFAK TDGDLRAVMETMFTSREFFSEGARQAKVKSPLEMVVSAARSLDLKPTDTFTLVQKVADMGEPLYSKESPNGYKDTGELWL NTASVMARIEFAAALAKGQIPGAPVDSARFAGKTAAAISHELLNREPSKQTLTAIEQGLQGRQPSAEVIAGLVISSPEFQ RR
Sequences:
>Translated_642_residues MKRLLLAAVMMAAANHAAERFDAKLDSEQKMLQALDRLTFGARPGDLEEVRRLGVEKWIELQLHPVRIAENPALEGRLKP LATIRMEPAEVITKFFPQFPPGFARANRVSLNELLPPDQFRKVLSGTAEERRAAIMALEPEKRMKVLAQVPPNVVDGLPD LQKEQVAARQLQQEEARMEMRKLRPPLNELLEPNQVQIALHGPEEQRAALFASLDSDKRQKLAAALPMEALANQPELRRL GVMTRTPQQVVIGDLREAKLFRAIYSNRQLEEVLADFWFNHFNVFEGKDRERSMLASYERDAIRPHVLGKFKDLLLATAR HPAMLYYLDNWQSMSGDLFEIGPFAPGPFGPPQPFGRQAHGLNENYGRELLELHTMGVNGGYTQQDVIAVARCFTGWTIR QPNKSPEFAFAVFMHDGGEKTVLGHKIAAGGGEQDGLQVIDILAHHPSTAHFISMKLARRFVADDPPAALVERMARTFAK TDGDLRAVMETMFTSREFFSEGARQAKVKSPLEMVVSAARSLDLKPTDTFTLVQKVADMGEPLYSKESPNGYKDTGELWL NTASVMARIEFAAALAKGQIPGAPVDSARFAGKTAAAISHELLNREPSKQTLTAIEQGLQGRQPSAEVIAGLVISSPEFQ RR >Mature_642_residues MKRLLLAAVMMAAANHAAERFDAKLDSEQKMLQALDRLTFGARPGDLEEVRRLGVEKWIELQLHPVRIAENPALEGRLKP LATIRMEPAEVITKFFPQFPPGFARANRVSLNELLPPDQFRKVLSGTAEERRAAIMALEPEKRMKVLAQVPPNVVDGLPD LQKEQVAARQLQQEEARMEMRKLRPPLNELLEPNQVQIALHGPEEQRAALFASLDSDKRQKLAAALPMEALANQPELRRL GVMTRTPQQVVIGDLREAKLFRAIYSNRQLEEVLADFWFNHFNVFEGKDRERSMLASYERDAIRPHVLGKFKDLLLATAR HPAMLYYLDNWQSMSGDLFEIGPFAPGPFGPPQPFGRQAHGLNENYGRELLELHTMGVNGGYTQQDVIAVARCFTGWTIR QPNKSPEFAFAVFMHDGGEKTVLGHKIAAGGGEQDGLQVIDILAHHPSTAHFISMKLARRFVADDPPAALVERMARTFAK TDGDLRAVMETMFTSREFFSEGARQAKVKSPLEMVVSAARSLDLKPTDTFTLVQKVADMGEPLYSKESPNGYKDTGELWL NTASVMARIEFAAALAKGQIPGAPVDSARFAGKTAAAISHELLNREPSKQTLTAIEQGLQGRQPSAEVIAGLVISSPEFQ RR
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71509; Mature: 71509
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLLAAVMMAAANHAAERFDAKLDSEQKMLQALDRLTFGARPGDLEEVRRLGVEKWIE CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHH LQLHPVRIAENPALEGRLKPLATIRMEPAEVITKFFPQFPPGFARANRVSLNELLPPDQF EEEEEEEEECCCCCCCCCCCHHHEECCHHHHHHHHHCCCCCCHHHCCCCCHHHCCCHHHH RKVLSGTAEERRAAIMALEPEKRMKVLAQVPPNVVDGLPDLQKEQVAARQLQQEEARMEM HHHHCCCHHHHHHEEEEECCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH RKLRPPLNELLEPNQVQIALHGPEEQRAALFASLDSDKRQKLAAALPMEALANQPELRRL HHHCCCHHHHCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCHHHHH GVMTRTPQQVVIGDLREAKLFRAIYSNRQLEEVLADFWFNHFNVFEGKDRERSMLASYER CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DAIRPHVLGKFKDLLLATARHPAMLYYLDNWQSMSGDLFEIGPFAPGPFGPPQPFGRQAH HCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC GLNENYGRELLELHTMGVNGGYTQQDVIAVARCFTGWTIRQPNKSPEFAFAVFMHDGGEK CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEECCCCE TVLGHKIAAGGGEQDGLQVIDILAHHPSTAHFISMKLARRFVADDPPAALVERMARTFAK EEECCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TDGDLRAVMETMFTSREFFSEGARQAKVKSPLEMVVSAARSLDLKPTDTFTLVQKVADMG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC EPLYSKESPNGYKDTGELWLNTASVMARIEFAAALAKGQIPGAPVDSARFAGKTAAAISH CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHH ELLNREPSKQTLTAIEQGLQGRQPSAEVIAGLVISSPEFQRR HHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MKRLLLAAVMMAAANHAAERFDAKLDSEQKMLQALDRLTFGARPGDLEEVRRLGVEKWIE CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHH LQLHPVRIAENPALEGRLKPLATIRMEPAEVITKFFPQFPPGFARANRVSLNELLPPDQF EEEEEEEEECCCCCCCCCCCHHHEECCHHHHHHHHHCCCCCCHHHCCCCCHHHCCCHHHH RKVLSGTAEERRAAIMALEPEKRMKVLAQVPPNVVDGLPDLQKEQVAARQLQQEEARMEM HHHHCCCHHHHHHEEEEECCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH RKLRPPLNELLEPNQVQIALHGPEEQRAALFASLDSDKRQKLAAALPMEALANQPELRRL HHHCCCHHHHCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCHHHHH GVMTRTPQQVVIGDLREAKLFRAIYSNRQLEEVLADFWFNHFNVFEGKDRERSMLASYER CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DAIRPHVLGKFKDLLLATARHPAMLYYLDNWQSMSGDLFEIGPFAPGPFGPPQPFGRQAH HCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC GLNENYGRELLELHTMGVNGGYTQQDVIAVARCFTGWTIRQPNKSPEFAFAVFMHDGGEK CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEECCCCE TVLGHKIAAGGGEQDGLQVIDILAHHPSTAHFISMKLARRFVADDPPAALVERMARTFAK EEECCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TDGDLRAVMETMFTSREFFSEGARQAKVKSPLEMVVSAARSLDLKPTDTFTLVQKVADMG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC EPLYSKESPNGYKDTGELWLNTASVMARIEFAAALAKGQIPGAPVDSARFAGKTAAAISH CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHH ELLNREPSKQTLTAIEQGLQGRQPSAEVIAGLVISSPEFQRR HHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA