| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623761
Identifier: 116623761
GI number: 116623761
Start: 5912826
End: 5915153
Strand: Direct
Name: 116623761
Synonym: Acid_4673
Alternate gene names: NA
Gene position: 5912826-5915153 (Clockwise)
Preceding gene: 116623759
Following gene: 116623762
Centisome position: 59.33
GC content: 60.7
Gene sequence:
>2328_bases ATGCAGTCATCCGATAAACCCCGGTCCTCCTTATCCGCTGTCTCGATTGTCTTCCTGGCAGTCTTCAGCCAGGCATGCAG CTCCAACCCCTTCGCCACGAAGGAAGAGTACGTCCGCCGCGGCCGCCAGTTTACGGAGCAGGGTAACTATGCCGATGCCA CCCTGCAATTTCGTAAGGCCCTCCAGAAAGACGCATCCTACGGCGAAGCATATCTCCGTTACGGCCAACTGCTTAACAAG ACCGGGAATCACGCGGAAGCCTTCCAGTCACTCTCCAGGGCTGCCGACCTGATGCCCGCGTCCGAAGAGGCCAAGGTGGA GTTGGGCAATCTGGCGATCACCGCGCTCCTGGGCAGTCCGGGCCGCCCGCCGAAATACTACGAAACCGCCGTGAAGATCT CCGGCGAGCTGCTCGTCCGGAATCCCAAGTCCTTCGATGGTCTCCGCCTGAAAGGCCTTCTCGCCCTCGCCGACGGCCAC CTCAAAGAGGCAATCGATTCCCTCCGCGCAGCTTCGGCGGTAAGACCGGACCGCGGCGACGTCTCGACCCAACTGGTACA GGCACTCCTGGCCGAGAATAGGCAGACCGAGGCCGAAAATACCGCCCGCACCACGCTGACCTCGGTCAGGAACTACGGCC CTTTGTACGATGCCTTGTACGGCTATTACATGTCGGCGAATCTCACCGCCGATGCCGAGCAGTTGATGAAATCCAAGGTT GCCAACAATCCCAAGGAACCTTTCTATGTGATCCAGTTGGCCGACCACTACTGGCGCCAGAAAAAGGCTCCCGAGCTCGA TGCCCTCCTGAGGGATTTCGTGGCCAAATTCCAGCAGTACCCCAAAGCACCGATGGATGCCGGCGATTTCTACCAGCGAA TCGGAAAACTCGAACAGGCGATTGCCCTGTATCAGAAAGGCCTCGAATCCGACCGGACCAACCGTAAGGACTACCTGAAG CGAATTGTGGACGTCAGGATGCAACAATCCCGTTTCGACGAAGCCACCGCGACTGTCGATTCAATCTTGACGGAGTTCCC CGGCGATCTGGATGCAATAGCATCGCGCGCAGCCTTGCGCATGACCACCGGGAAGCCCACCGAAATCCAAAGAGCGCGCG ATGAGTTCGGCGCTCTCCTCAAGCGCGATCCCCAAAACAACGAGCTTCGCTTTAACCTGGCGCGAGCCTCCAGGCAAGCC GGCGACGAAACCCAGGCCCGCTCCGCACTAGTCGAAATTCTCCGCCGGGACCCCAACCACCGGAACGCCTTGCGCGAACT TGCCGACCTGGAAATCCAGAACCAGAGACCCGACGAAGCCTTGCAGTATGCGGAACGATTGATCGCCTTGGAGCCTGCAA ACATCGGCGCCCGGTTGGTGCGAACCGCGGCTTGGGCCCTGCGCGGCCCCAAGACAGAGGTGCGCGCCGAGTTGCGCCGT ATGATCGCCGAGCGCCCGGATATGGCCGAGCCCGCTCTGCAGATGGCCACGCTGGAAATGGATCAAGGGAACTACGCGGA AGCCGAACGCAGCTACCAGAGGCTGCGTGCAACCCCAAAGTTCGATATCCGGCCTCTGCGCGGATTAGTCGTCGTTTACC AGGCCCAGGGCCAGAGCCGCAAGGCGCTCGATCTCGTTCAGCAGGAATCCAAGCGGACGAACGACATTCAGGTTCGCACG CTCCTGGCCACAACCGCGGCCCAAGCCGGCGATCTGGATTTGGCCTTATCCACGGCACAGGCAATCTTGAACGACATCCC GCAGGATCCGAAGAACCTGATCTTCATGGGTCAGTTGCTGGAACAGAAGGGCCAGATGGAGCAGGCCATCGTCCAGTACG ATCGAGCGCGGCAGCTCGCGCCGAAAGACGGCCTCGTCGCCGCCCGCTATGGCCTCGCCCTGGTAAACACTGGCCGGACC CGGGACGGCATCGCGGCCCTCCGCGAAAGCGTCAGGTTGCAGCCGGAGTCGCCGCTCTTGATGAACAACCTCGCCTGGTA CCTGGCGGTTGCGGGAACAAACCTCGATGAGGCGCAATCGCTGGCTCAACGCGCCGCACAAAAGGAACCGGCCAATTCCA CCTTCAGCGACACCCTTGGAGTCGTTTTTCTCAAGGCCGGAAAAGCTGACAACGCGATCCAGATACTCCAGGCGCTCGTC CGTAAAGAGCCCGCGTCGCCCACCTACCGGCTCCATCTCGCCTGGGCACTAATCAGCCTGGGACATACTCAGGACGCACG TACCGAACTAACGAAAGCCGGCAGCAGCCGCCCATCGCCGGCGGAAGCCAAAGAGATTCAACAGCAACTCGCCCTGCTGT CGAAATAG
Upstream 100 bases:
>100_bases TCACAGTCCCCCTACCTGGATCAGTACTGTCGCGGTTCTAGTGAGCAGCTTCAGTGACGTGCACCTGCGGTAGTATCGAA TATCACTATTACCGTTCACC
Downstream 100 bases:
>100_bases CAGCCAGCTCCGTTCTTATTTTTGTTGCACAAAGCAGCAGATATTTCGCCGCGCGTCCCAAACTCATCTCTGCGTTTTCT TTACTGAGCGTCAGCTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; PEP-CTERM System TPR-Repeat Lipoprotein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Protein; Tetratricopeptide Domain Protein; Tetratricopeptide Repeat Domain Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein
Number of amino acids: Translated: 775; Mature: 775
Protein sequence:
>775_residues MQSSDKPRSSLSAVSIVFLAVFSQACSSNPFATKEEYVRRGRQFTEQGNYADATLQFRKALQKDASYGEAYLRYGQLLNK TGNHAEAFQSLSRAADLMPASEEAKVELGNLAITALLGSPGRPPKYYETAVKISGELLVRNPKSFDGLRLKGLLALADGH LKEAIDSLRAASAVRPDRGDVSTQLVQALLAENRQTEAENTARTTLTSVRNYGPLYDALYGYYMSANLTADAEQLMKSKV ANNPKEPFYVIQLADHYWRQKKAPELDALLRDFVAKFQQYPKAPMDAGDFYQRIGKLEQAIALYQKGLESDRTNRKDYLK RIVDVRMQQSRFDEATATVDSILTEFPGDLDAIASRAALRMTTGKPTEIQRARDEFGALLKRDPQNNELRFNLARASRQA GDETQARSALVEILRRDPNHRNALRELADLEIQNQRPDEALQYAERLIALEPANIGARLVRTAAWALRGPKTEVRAELRR MIAERPDMAEPALQMATLEMDQGNYAEAERSYQRLRATPKFDIRPLRGLVVVYQAQGQSRKALDLVQQESKRTNDIQVRT LLATTAAQAGDLDLALSTAQAILNDIPQDPKNLIFMGQLLEQKGQMEQAIVQYDRARQLAPKDGLVAARYGLALVNTGRT RDGIAALRESVRLQPESPLLMNNLAWYLAVAGTNLDEAQSLAQRAAQKEPANSTFSDTLGVVFLKAGKADNAIQILQALV RKEPASPTYRLHLAWALISLGHTQDARTELTKAGSSRPSPAEAKEIQQQLALLSK
Sequences:
>Translated_775_residues MQSSDKPRSSLSAVSIVFLAVFSQACSSNPFATKEEYVRRGRQFTEQGNYADATLQFRKALQKDASYGEAYLRYGQLLNK TGNHAEAFQSLSRAADLMPASEEAKVELGNLAITALLGSPGRPPKYYETAVKISGELLVRNPKSFDGLRLKGLLALADGH LKEAIDSLRAASAVRPDRGDVSTQLVQALLAENRQTEAENTARTTLTSVRNYGPLYDALYGYYMSANLTADAEQLMKSKV ANNPKEPFYVIQLADHYWRQKKAPELDALLRDFVAKFQQYPKAPMDAGDFYQRIGKLEQAIALYQKGLESDRTNRKDYLK RIVDVRMQQSRFDEATATVDSILTEFPGDLDAIASRAALRMTTGKPTEIQRARDEFGALLKRDPQNNELRFNLARASRQA GDETQARSALVEILRRDPNHRNALRELADLEIQNQRPDEALQYAERLIALEPANIGARLVRTAAWALRGPKTEVRAELRR MIAERPDMAEPALQMATLEMDQGNYAEAERSYQRLRATPKFDIRPLRGLVVVYQAQGQSRKALDLVQQESKRTNDIQVRT LLATTAAQAGDLDLALSTAQAILNDIPQDPKNLIFMGQLLEQKGQMEQAIVQYDRARQLAPKDGLVAARYGLALVNTGRT RDGIAALRESVRLQPESPLLMNNLAWYLAVAGTNLDEAQSLAQRAAQKEPANSTFSDTLGVVFLKAGKADNAIQILQALV RKEPASPTYRLHLAWALISLGHTQDARTELTKAGSSRPSPAEAKEIQQQLALLSK >Mature_775_residues MQSSDKPRSSLSAVSIVFLAVFSQACSSNPFATKEEYVRRGRQFTEQGNYADATLQFRKALQKDASYGEAYLRYGQLLNK TGNHAEAFQSLSRAADLMPASEEAKVELGNLAITALLGSPGRPPKYYETAVKISGELLVRNPKSFDGLRLKGLLALADGH LKEAIDSLRAASAVRPDRGDVSTQLVQALLAENRQTEAENTARTTLTSVRNYGPLYDALYGYYMSANLTADAEQLMKSKV ANNPKEPFYVIQLADHYWRQKKAPELDALLRDFVAKFQQYPKAPMDAGDFYQRIGKLEQAIALYQKGLESDRTNRKDYLK RIVDVRMQQSRFDEATATVDSILTEFPGDLDAIASRAALRMTTGKPTEIQRARDEFGALLKRDPQNNELRFNLARASRQA GDETQARSALVEILRRDPNHRNALRELADLEIQNQRPDEALQYAERLIALEPANIGARLVRTAAWALRGPKTEVRAELRR MIAERPDMAEPALQMATLEMDQGNYAEAERSYQRLRATPKFDIRPLRGLVVVYQAQGQSRKALDLVQQESKRTNDIQVRT LLATTAAQAGDLDLALSTAQAILNDIPQDPKNLIFMGQLLEQKGQMEQAIVQYDRARQLAPKDGLVAARYGLALVNTGRT RDGIAALRESVRLQPESPLLMNNLAWYLAVAGTNLDEAQSLAQRAAQKEPANSTFSDTLGVVFLKAGKADNAIQILQALV RKEPASPTYRLHLAWALISLGHTQDARTELTKAGSSRPSPAEAKEIQQQLALLSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86098; Mature: 86098
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSDKPRSSLSAVSIVFLAVFSQACSSNPFATKEEYVRRGRQFTEQGNYADATLQFRKA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH LQKDASYGEAYLRYGQLLNKTGNHAEAFQSLSRAADLMPASEEAKVELGNLAITALLGSP HHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHEEEEEEECCC GRPPKYYETAVKISGELLVRNPKSFDGLRLKGLLALADGHLKEAIDSLRAASAVRPDRGD CCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC VSTQLVQALLAENRQTEAENTARTTLTSVRNYGPLYDALYGYYMSANLTADAEQLMKSKV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHH ANNPKEPFYVIQLADHYWRQKKAPELDALLRDFVAKFQQYPKAPMDAGDFYQRIGKLEQA CCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IALYQKGLESDRTNRKDYLKRIVDVRMQQSRFDEATATVDSILTEFPGDLDAIASRAALR HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEE MTTGKPTEIQRARDEFGALLKRDPQNNELRFNLARASRQAGDETQARSALVEILRRDPNH ECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCH RNALRELADLEIQNQRPDEALQYAERLIALEPANIGARLVRTAAWALRGPKTEVRAELRR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH MIAERPDMAEPALQMATLEMDQGNYAEAERSYQRLRATPKFDIRPLRGLVVVYQAQGQSR HHHCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCH KALDLVQQESKRTNDIQVRTLLATTAAQAGDLDLALSTAQAILNDIPQDPKNLIFMGQLL HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EQKGQMEQAIVQYDRARQLAPKDGLVAARYGLALVNTGRTRDGIAALRESVRLQPESPLL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCEEEEECCCCHHHHHHHHHHHCCCCCCCHH MNNLAWYLAVAGTNLDEAQSLAQRAAQKEPANSTFSDTLGVVFLKAGKADNAIQILQALV HHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHH RKEPASPTYRLHLAWALISLGHTQDARTELTKAGSSRPSPAEAKEIQQQLALLSK HCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MQSSDKPRSSLSAVSIVFLAVFSQACSSNPFATKEEYVRRGRQFTEQGNYADATLQFRKA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH LQKDASYGEAYLRYGQLLNKTGNHAEAFQSLSRAADLMPASEEAKVELGNLAITALLGSP HHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHEEEEEEECCC GRPPKYYETAVKISGELLVRNPKSFDGLRLKGLLALADGHLKEAIDSLRAASAVRPDRGD CCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC VSTQLVQALLAENRQTEAENTARTTLTSVRNYGPLYDALYGYYMSANLTADAEQLMKSKV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHH ANNPKEPFYVIQLADHYWRQKKAPELDALLRDFVAKFQQYPKAPMDAGDFYQRIGKLEQA CCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IALYQKGLESDRTNRKDYLKRIVDVRMQQSRFDEATATVDSILTEFPGDLDAIASRAALR HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEE MTTGKPTEIQRARDEFGALLKRDPQNNELRFNLARASRQAGDETQARSALVEILRRDPNH ECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCH RNALRELADLEIQNQRPDEALQYAERLIALEPANIGARLVRTAAWALRGPKTEVRAELRR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH MIAERPDMAEPALQMATLEMDQGNYAEAERSYQRLRATPKFDIRPLRGLVVVYQAQGQSR HHHCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCH KALDLVQQESKRTNDIQVRTLLATTAAQAGDLDLALSTAQAILNDIPQDPKNLIFMGQLL HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EQKGQMEQAIVQYDRARQLAPKDGLVAARYGLALVNTGRTRDGIAALRESVRLQPESPLL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCEEEEECCCCHHHHHHHHHHHCCCCCCCHH MNNLAWYLAVAGTNLDEAQSLAQRAAQKEPANSTFSDTLGVVFLKAGKADNAIQILQALV HHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHH RKEPASPTYRLHLAWALISLGHTQDARTELTKAGSSRPSPAEAKEIQQQLALLSK HCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA