| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623758
Identifier: 116623758
GI number: 116623758
Start: 5908448
End: 5910736
Strand: Direct
Name: 116623758
Synonym: Acid_4670
Alternate gene names: NA
Gene position: 5908448-5910736 (Clockwise)
Preceding gene: 116623757
Following gene: 116623759
Centisome position: 59.29
GC content: 59.72
Gene sequence:
>2289_bases ATGAAAGCAATTCCTCTCCTCCTCTTATTACCCGTTTTGTTGCTGCTGGCCTGCGGAGGTTCCGCGCGACAGCATCTAAG TCGCGGCAATTCGTTTTACGCCCAGCAAAAATACTCCGACGCGGAAATCAATTACTCCAAGGCCATCCAACAAGATCCAC GGCTGGTCGAGGCCTACTTCCGGCTCGGGCTCACATACGCAAAGGAACAGCGTCCAGCCGACGCCCACCGATCACTGGCC AAGGCGGTCGAGTTCTCCCCGCGCGACATCACTTTCGCGGTCGCCCTTGGCGATCTCACTTTCGCCATATACGTGCAGGA TCCCACCAGGCCAAAAATGATGTACGACCAAACTGCCATTATGGCGGACCGCATCCTGGCCCTGGATGCGAACTCGCCCG ATGGCTTGCGCCTCAAGGGGTCACTGCGCCTGCTGGATCGGAAACCCGAGGAAAGTGTGGTTCTCTATCGCCGGGCCAAC GAGTTGCGACCTTCAAATGGCGACATCGTCCTGGGGTACACCCAGGCGTTGATGCAGGCTGGGAAAGTTGCTGAGGCTGA GTCCTTGGCCAGTGTGTTCCTGGCGAAGAATTCCTGGTTCGCCCCACTCTATGGCGTACTCTATGACGAGTACATGGCGC GCGGCCGACGCGAAGATGCCGAAAAGACCCTGCAGGCGTGGGCAGCTAAGAACCCGAAGAGCATCGATGCCGTTTTGCGG TTGGCCAGCCACTATGTGCGTGTGCAGAGAATGGCTGACGCCACCTCCGTCCTGCGACAAGCCGCGGAAGATACAGCCAA CTTCCCTGATGGACGAATCCGCGTGGGCGATTTCTATGCCGGTCTCGGACGCTGGTCCGATGCCTTCGAGCAGTACCAGA AGGGCTTGCAATCAGACTCGAAGAACGCTCTAAAGTACCGCAAGAAGATGGCTTCCGCCTATCTGGCGCAAGGCAATCAG CAGGCAGCGGCCCAAGCCTTGGATCAGATTGTGAAGGATTTTCCGGAGGATTCGGATGCCAAAGGCGCGCGAGCACGGCT TTGGCTCGACATGGGTAAAACCGACGCAGCCGATAGCGCACTGGCTGAGTTTCAGGCCCGTACGAAAGCGCAGCCGGGCG ATCCGAGCCTCTTGTACGAACTGGGCCGGGCCTACCTGCTCAAGGGTGATTTGCCGGCGGCGCGGTCCGCGCTAACACGG GCGGCCGAACTGAAGAAGGAGTATCTGCCGCCCCGTTTCGCGCTGGCGCAACTCGCTCTGAACCAAAAGCTCTCCAATCA GGCGATCCATGCTGCGGAAGAGATTCTCGAAGTTGCTCCTGGCGAACCGCGGGCGAGGCTCATGCGCGCGATGGGCCTCA TGAGCGCCGACCGATTGCCCGAAGCCAAACAGGAACTGCGACTTCTGCTGCGCGATTATCCGCGGTTTAGCGAGGCCCAA CTTCAGACCGGGCTGCTGGCGATCCGGGAGAAGAACTTCGGGGAAGCGGAGGCCATTTTCCGTGGTCTATCGGCCGGCGG AACTCGTGATGGCGCCGCCGCAGAAGGGCTTGCCGGAGCTTACGTCGCGCAGGGGCATTACGATAAAGCTCTGCAGGTGC TGCAGAACGAAGTGGAGAAGAATCCGGACAACCTGGGCCTGGCGAATGCGCTGGCCCTGACTGCCCTGGAAGCAAAGCGC TATGATCTTGCCATCACTCGGTGGCAAATGATTGTCGCCGCTAGGCCCAAGTCGCTGCTACCCTATGTTTCCCTTGCCAC CTCCTATCGTCTGAGCGGTAACGCTGCCGCCGCGCGTGCGACGCTGCAGAGGGCGCAAGCGATCGACTCCTCGGAACCTC GTGAGAAGGGGGCTCTGGCGGCTGAGCTTTTCGCGAACGGGATGGCGGTGGAATCACGGGAAACGCTGCGCCGCATGCTG GGTCCACAGAGCAGCGCCGGCGAGTTGAACAATCTTGCGTTCCTGATTGTGGAAACGGGCGGGGACTTCAAGGAAGCTCA GCAACTCATTGAACGTGCCCTCGCCCAGGTCCCCGGCGACGTTCACGCCCTGGATACACTGGGTTGGATTTACGTCAAGA AAGGCATGCCCGACGAGGCCATCCAGATCCTGACCAAACTCATCCAGAAGAGCCCCAGCGAGCCTTCGTACCTTTACCAC CTGGGCGCGGCACTAGTTCAAAAAGGCGACAAACCAAAGGCCCGCAGCGCCTTAGAGGCTGCGCTGGCAAAGAATCTCGA ACCCAGTGATGCGGGAAATGCACGTAAGCTACTTGCCGCGTTGAACTGA
Upstream 100 bases:
>100_bases GGGTGTTGAACCCCCGGCTCCTCCTGTTGTGTCGCTCATCCTCAGCGGGCAGTGGTTGATTCCGATCCGGAATGTTTCGG AACAATCGTCGAGTCGTATC
Downstream 100 bases:
>100_bases GATCCTAATCGTCCCCGGCGATCCGCAGGTCTCGAACGGCTCATTGCCCAGGTAACGAGGCACCGTAGTAGTCTCGAATC TGCTTTGAAGTGCGTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Tetratricopeptide Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap
Number of amino acids: Translated: 762; Mature: 762
Protein sequence:
>762_residues MKAIPLLLLLPVLLLLACGGSARQHLSRGNSFYAQQKYSDAEINYSKAIQQDPRLVEAYFRLGLTYAKEQRPADAHRSLA KAVEFSPRDITFAVALGDLTFAIYVQDPTRPKMMYDQTAIMADRILALDANSPDGLRLKGSLRLLDRKPEESVVLYRRAN ELRPSNGDIVLGYTQALMQAGKVAEAESLASVFLAKNSWFAPLYGVLYDEYMARGRREDAEKTLQAWAAKNPKSIDAVLR LASHYVRVQRMADATSVLRQAAEDTANFPDGRIRVGDFYAGLGRWSDAFEQYQKGLQSDSKNALKYRKKMASAYLAQGNQ QAAAQALDQIVKDFPEDSDAKGARARLWLDMGKTDAADSALAEFQARTKAQPGDPSLLYELGRAYLLKGDLPAARSALTR AAELKKEYLPPRFALAQLALNQKLSNQAIHAAEEILEVAPGEPRARLMRAMGLMSADRLPEAKQELRLLLRDYPRFSEAQ LQTGLLAIREKNFGEAEAIFRGLSAGGTRDGAAAEGLAGAYVAQGHYDKALQVLQNEVEKNPDNLGLANALALTALEAKR YDLAITRWQMIVAARPKSLLPYVSLATSYRLSGNAAAARATLQRAQAIDSSEPREKGALAAELFANGMAVESRETLRRML GPQSSAGELNNLAFLIVETGGDFKEAQQLIERALAQVPGDVHALDTLGWIYVKKGMPDEAIQILTKLIQKSPSEPSYLYH LGAALVQKGDKPKARSALEAALAKNLEPSDAGNARKLLAALN
Sequences:
>Translated_762_residues MKAIPLLLLLPVLLLLACGGSARQHLSRGNSFYAQQKYSDAEINYSKAIQQDPRLVEAYFRLGLTYAKEQRPADAHRSLA KAVEFSPRDITFAVALGDLTFAIYVQDPTRPKMMYDQTAIMADRILALDANSPDGLRLKGSLRLLDRKPEESVVLYRRAN ELRPSNGDIVLGYTQALMQAGKVAEAESLASVFLAKNSWFAPLYGVLYDEYMARGRREDAEKTLQAWAAKNPKSIDAVLR LASHYVRVQRMADATSVLRQAAEDTANFPDGRIRVGDFYAGLGRWSDAFEQYQKGLQSDSKNALKYRKKMASAYLAQGNQ QAAAQALDQIVKDFPEDSDAKGARARLWLDMGKTDAADSALAEFQARTKAQPGDPSLLYELGRAYLLKGDLPAARSALTR AAELKKEYLPPRFALAQLALNQKLSNQAIHAAEEILEVAPGEPRARLMRAMGLMSADRLPEAKQELRLLLRDYPRFSEAQ LQTGLLAIREKNFGEAEAIFRGLSAGGTRDGAAAEGLAGAYVAQGHYDKALQVLQNEVEKNPDNLGLANALALTALEAKR YDLAITRWQMIVAARPKSLLPYVSLATSYRLSGNAAAARATLQRAQAIDSSEPREKGALAAELFANGMAVESRETLRRML GPQSSAGELNNLAFLIVETGGDFKEAQQLIERALAQVPGDVHALDTLGWIYVKKGMPDEAIQILTKLIQKSPSEPSYLYH LGAALVQKGDKPKARSALEAALAKNLEPSDAGNARKLLAALN >Mature_762_residues MKAIPLLLLLPVLLLLACGGSARQHLSRGNSFYAQQKYSDAEINYSKAIQQDPRLVEAYFRLGLTYAKEQRPADAHRSLA KAVEFSPRDITFAVALGDLTFAIYVQDPTRPKMMYDQTAIMADRILALDANSPDGLRLKGSLRLLDRKPEESVVLYRRAN ELRPSNGDIVLGYTQALMQAGKVAEAESLASVFLAKNSWFAPLYGVLYDEYMARGRREDAEKTLQAWAAKNPKSIDAVLR LASHYVRVQRMADATSVLRQAAEDTANFPDGRIRVGDFYAGLGRWSDAFEQYQKGLQSDSKNALKYRKKMASAYLAQGNQ QAAAQALDQIVKDFPEDSDAKGARARLWLDMGKTDAADSALAEFQARTKAQPGDPSLLYELGRAYLLKGDLPAARSALTR AAELKKEYLPPRFALAQLALNQKLSNQAIHAAEEILEVAPGEPRARLMRAMGLMSADRLPEAKQELRLLLRDYPRFSEAQ LQTGLLAIREKNFGEAEAIFRGLSAGGTRDGAAAEGLAGAYVAQGHYDKALQVLQNEVEKNPDNLGLANALALTALEAKR YDLAITRWQMIVAARPKSLLPYVSLATSYRLSGNAAAARATLQRAQAIDSSEPREKGALAAELFANGMAVESRETLRRML GPQSSAGELNNLAFLIVETGGDFKEAQQLIERALAQVPGDVHALDTLGWIYVKKGMPDEAIQILTKLIQKSPSEPSYLYH LGAALVQKGDKPKARSALEAALAKNLEPSDAGNARKLLAALN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83417; Mature: 83417
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIPLLLLLPVLLLLACGGSARQHLSRGNSFYAQQKYSDAEINYSKAIQQDPRLVEAYF CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHCCHHHHHHHH RLGLTYAKEQRPADAHRSLAKAVEFSPRDITFAVALGDLTFAIYVQDPTRPKMMYDQTAI HHCCHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEEECCCCCCHHHHHHHH MADRILALDANSPDGLRLKGSLRLLDRKPEESVVLYRRANELRPSNGDIVLGYTQALMQA HHHHEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEHHHHHHHH GKVAEAESLASVFLAKNSWFAPLYGVLYDEYMARGRREDAEKTLQAWAAKNPKSIDAVLR CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH LASHYVRVQRMADATSVLRQAAEDTANFPDGRIRVGDFYAGLGRWSDAFEQYQKGLQSDS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCC KNALKYRKKMASAYLAQGNQQAAAQALDQIVKDFPEDSDAKGARARLWLDMGKTDAADSA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHH LAEFQARTKAQPGDPSLLYELGRAYLLKGDLPAARSALTRAAELKKEYLPPRFALAQLAL HHHHHHHHCCCCCCHHHHHHHCHHEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH NQKLSNQAIHAAEEILEVAPGEPRARLMRAMGLMSADRLPEAKQELRLLLRDYPRFSEAQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH LQTGLLAIREKNFGEAEAIFRGLSAGGTRDGAAAEGLAGAYVAQGHYDKALQVLQNEVEK HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHCCCHHHHHCCCHHHHHHHHHHHHHC NPDNLGLANALALTALEAKRYDLAITRWQMIVAARPKSLLPYVSLATSYRLSGNAAAARA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCHHHHHH TLQRAQAIDSSEPREKGALAAELFANGMAVESRETLRRMLGPQSSAGELNNLAFLIVETG HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECC GDFKEAQQLIERALAQVPGDVHALDTLGWIYVKKGMPDEAIQILTKLIQKSPSEPSYLYH CCHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHH LGAALVQKGDKPKARSALEAALAKNLEPSDAGNARKLLAALN HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MKAIPLLLLLPVLLLLACGGSARQHLSRGNSFYAQQKYSDAEINYSKAIQQDPRLVEAYF CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHCCHHHHHHHH RLGLTYAKEQRPADAHRSLAKAVEFSPRDITFAVALGDLTFAIYVQDPTRPKMMYDQTAI HHCCHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEEECCCCCCHHHHHHHH MADRILALDANSPDGLRLKGSLRLLDRKPEESVVLYRRANELRPSNGDIVLGYTQALMQA HHHHEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEHHHHHHHH GKVAEAESLASVFLAKNSWFAPLYGVLYDEYMARGRREDAEKTLQAWAAKNPKSIDAVLR CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH LASHYVRVQRMADATSVLRQAAEDTANFPDGRIRVGDFYAGLGRWSDAFEQYQKGLQSDS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCC KNALKYRKKMASAYLAQGNQQAAAQALDQIVKDFPEDSDAKGARARLWLDMGKTDAADSA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHH LAEFQARTKAQPGDPSLLYELGRAYLLKGDLPAARSALTRAAELKKEYLPPRFALAQLAL HHHHHHHHCCCCCCHHHHHHHCHHEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH NQKLSNQAIHAAEEILEVAPGEPRARLMRAMGLMSADRLPEAKQELRLLLRDYPRFSEAQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH LQTGLLAIREKNFGEAEAIFRGLSAGGTRDGAAAEGLAGAYVAQGHYDKALQVLQNEVEK HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHCCCHHHHHCCCHHHHHHHHHHHHHC NPDNLGLANALALTALEAKRYDLAITRWQMIVAARPKSLLPYVSLATSYRLSGNAAAARA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCHHHHHH TLQRAQAIDSSEPREKGALAAELFANGMAVESRETLRRMLGPQSSAGELNNLAFLIVETG HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECC GDFKEAQQLIERALAQVPGDVHALDTLGWIYVKKGMPDEAIQILTKLIQKSPSEPSYLYH CCHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHH LGAALVQKGDKPKARSALEAALAKNLEPSDAGNARKLLAALN HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA