| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116623735
Identifier: 116623735
GI number: 116623735
Start: 5877360
End: 5878331
Strand: Direct
Name: 116623735
Synonym: Acid_4647
Alternate gene names: NA
Gene position: 5877360-5878331 (Clockwise)
Preceding gene: 116623734
Following gene: 116623736
Centisome position: 58.98
GC content: 57.41
Gene sequence:
>972_bases ATGACGCCGACCAGCATATCCATCGTGATCGCCACCCGCAATCGCGTCGCGCCTCTGCGAGCCACACTGGAGACTTTGAG GGGCCAGTCTCTGTTCCCACGTGAGGTCCTGATCGTGGATGCGTCGGACGGTGAGGAAACCAGAGAGTTGATCGGGTCGC TGGCTCCCGATTCCCCGTTTCCGCTAACGTACACTCCGAGCTTGATTCGGAGTGCCGCACGCCAGCGAAATGCAGGCGCC GATCTGGCATCGGGCGAGGTCCTGGTATTCATGGATGACGACGTCTTGCTGGATCAGAGGTTCCTTGAAGAACTGGTGGG TCCGTTCGCCGCCGACGCTGATGGCCGGCTCGGAGGCGTTAGTGGAACCATAATCAACCAGACATATACACAACCCAAGG GAGTCAATCGTCTTCTCCTGGGATTGTGCCTCGGCAATTTCGATGCCTGCTGGGCCGGACGTCTCATGGGGCCGGCTGTT AATTTCTTGCCGCGGGATACACCCGGCACCGTCCAACAAGTGGACTGGTTGTTTTCCACGGGAACGGCATATCGAAAGGA TGTGTTTCGCCGTTATAGATTTGGCGAACAATTCACCGGCTACTCATTTGCCGAGGATGTCCACCTGTCGGCCCGTGTTG GGCGCGACTACCGGCTGAGCAACACTTGCCGCGCTCGCTTCGAACACAGGGACTTGGGACAGCATACGCACACGGATTGG GTTGCCTTGGGCGAGAGCATGGTGATCAACCGGCGCGCGATCATGGTGGACATTCTCGGGAGGGATGGACTGGCAGACGC CGTCCGGCTGTTCGCCTACGAGTTCCTCTATTGTGGATTGACAATGTTGGTGCAAGCAAGATTCCGACCACGGCAGCTTA CTAAAGTCGGCTTAATTTTATGGGGTAAACTGCGAGGTTTCGTTACTGCTTGGACGAACCATGCGATGCCAACGGTTCGG CCAGGATACTGA
Upstream 100 bases:
>100_bases TAGGCGACCGGTGCATAGTAGCGGCGGGCGCGGTAGTCACAAGGAGTTTTCCTGCCGGTTCGGTGGTAGGCGGTGTGCCG GCTGTATTGCTCAAACAACA
Downstream 100 bases:
>100_bases TATGCTCCAACCCCTTGTCAGCGTAATGATCGCAACCCGTGACCGGGCTCCGGAATTGCGCCGCACCTTGGAACTGGTGC GCCGACAGGAGTACGAAGCG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTPTSISIVIATRNRVAPLRATLETLRGQSLFPREVLIVDASDGEETRELIGSLAPDSPFPLTYTPSLIRSAARQRNAGA DLASGEVLVFMDDDVLLDQRFLEELVGPFAADADGRLGGVSGTIINQTYTQPKGVNRLLLGLCLGNFDACWAGRLMGPAV NFLPRDTPGTVQQVDWLFSTGTAYRKDVFRRYRFGEQFTGYSFAEDVHLSARVGRDYRLSNTCRARFEHRDLGQHTHTDW VALGESMVINRRAIMVDILGRDGLADAVRLFAYEFLYCGLTMLVQARFRPRQLTKVGLILWGKLRGFVTAWTNHAMPTVR PGY
Sequences:
>Translated_323_residues MTPTSISIVIATRNRVAPLRATLETLRGQSLFPREVLIVDASDGEETRELIGSLAPDSPFPLTYTPSLIRSAARQRNAGA DLASGEVLVFMDDDVLLDQRFLEELVGPFAADADGRLGGVSGTIINQTYTQPKGVNRLLLGLCLGNFDACWAGRLMGPAV NFLPRDTPGTVQQVDWLFSTGTAYRKDVFRRYRFGEQFTGYSFAEDVHLSARVGRDYRLSNTCRARFEHRDLGQHTHTDW VALGESMVINRRAIMVDILGRDGLADAVRLFAYEFLYCGLTMLVQARFRPRQLTKVGLILWGKLRGFVTAWTNHAMPTVR PGY >Mature_322_residues TPTSISIVIATRNRVAPLRATLETLRGQSLFPREVLIVDASDGEETRELIGSLAPDSPFPLTYTPSLIRSAARQRNAGAD LASGEVLVFMDDDVLLDQRFLEELVGPFAADADGRLGGVSGTIINQTYTQPKGVNRLLLGLCLGNFDACWAGRLMGPAVN FLPRDTPGTVQQVDWLFSTGTAYRKDVFRRYRFGEQFTGYSFAEDVHLSARVGRDYRLSNTCRARFEHRDLGQHTHTDWV ALGESMVINRRAIMVDILGRDGLADAVRLFAYEFLYCGLTMLVQARFRPRQLTKVGLILWGKLRGFVTAWTNHAMPTVRP GY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36007; Mature: 35875
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTSISIVIATRNRVAPLRATLETLRGQSLFPREVLIVDASDGEETRELIGSLAPDSPF CCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC PLTYTPSLIRSAARQRNAGADLASGEVLVFMDDDVLLDQRFLEELVGPFAADADGRLGGV CCEECHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC SGTIINQTYTQPKGVNRLLLGLCLGNFDACWAGRLMGPAVNFLPRDTPGTVQQVDWLFST CCEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHC GTAYRKDVFRRYRFGEQFTGYSFAEDVHLSARVGRDYRLSNTCRARFEHRDLGQHTHTDW CCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHH VALGESMVINRRAIMVDILGRDGLADAVRLFAYEFLYCGLTMLVQARFRPRQLTKVGLIL HHHCCHHEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH WGKLRGFVTAWTNHAMPTVRPGY HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TPTSISIVIATRNRVAPLRATLETLRGQSLFPREVLIVDASDGEETRELIGSLAPDSPF CCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC PLTYTPSLIRSAARQRNAGADLASGEVLVFMDDDVLLDQRFLEELVGPFAADADGRLGGV CCEECHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC SGTIINQTYTQPKGVNRLLLGLCLGNFDACWAGRLMGPAVNFLPRDTPGTVQQVDWLFST CCEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHC GTAYRKDVFRRYRFGEQFTGYSFAEDVHLSARVGRDYRLSNTCRARFEHRDLGQHTHTDW CCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHH VALGESMVINRRAIMVDILGRDGLADAVRLFAYEFLYCGLTMLVQARFRPRQLTKVGLIL HHHCCHHEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH WGKLRGFVTAWTNHAMPTVRPGY HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA