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The map label for this gene is tobS2 [H]

Identifier: 116623731

GI number: 116623731

Start: 5873240

End: 5874619

Strand: Direct

Name: tobS2 [H]

Synonym: Acid_4643

Alternate gene names: 116623731

Gene position: 5873240-5874619 (Clockwise)

Preceding gene: 116623730

Following gene: 116623732

Centisome position: 58.93

GC content: 58.19

Gene sequence:

>1380_bases
ATGAACACTAAGGCTAAGAGACTCGTGAAAGTGCTGCTTCGACAGACAATTGGCCGCGTGCCGCCGTCGGTCTCGCGGCT
AACAGGACGCCTGGCGAAGGATGGCGGGCAGCCGGTCCGCGACACCAGGTTGCGCCCTTGGGCAAGCTACCAGGCGGAGA
ATCGCAGCGCGTGGCTCGCCAGCGTTAAGCCGGCATTCCGGAAGATCTTTGTCGACGGCGTAGAAGGTCTACCGCAACCG
ACGGCGAAACAGTTCGCTCAACAGTGGGCGGAGTATTGTGGCTGTCGCTACGGCCTTCTGATGGCACACGGCACGGATGC
CCTGCGTATTGCCCTGGCCGCGGCTCTCGACCACGATGGATTGGATTATGGAGGAGAGGTAATCGTTCCTAATCTGTCGT
TCATCGCGACGGCCGCGGCCGCCCTCGACCGGCGATGCGGGATCGTCTTCGTTGACGTGGAACCGACGACGCTGCTCTTG
AATCCGCGTTGCGTGGAGGAGGCGATCCTTCCAGGTAGGACGCGGGCGATTATGCCCGTTCATCTCTTCGGGCAGCCGGC
CAACATGACGGCTCTGCGAGAGATCGCACAGCGCTACAAGCTCAAATTGATTGAAGATGCCGCGCAAGCGCACGGATCGG
TATGGGAGAGTGGACCAGTTGGATCGCTCGGTGATGCCGCAGCGTTTAGTTTCCAGTCGTTCAAGAACCTAACCTGCGGG
GAGGGCGGTGCCCTCACGACAAATGATGAGGACCTTTTTGAGCGGGCCTACTCTATGCATAATGTCGGCCGCTCTCGCCA
GCACAACCAGCGATGGGAACACATCACACTGGGTTGGAATTGCCGTATTACTGAATATCAGGCTGCCCTGTTGACCAGTC
GCTTTCGCGACTTCGAGCGGCAGCAGGAAAGGCGGCGAAATAATTTCCTGAAACTTCATGAGCTCTTAGCAGACGTGGCA
TGCGTGGTGCCGCTGTCAATGAGTCCGGGCGTGCGCAAACACGGCGTACACATGCTGGCCCTCCGGTATAAGGACGAGGA
GTGCGGGGGATTGCCCGTGGAAGACTTCTTGCGTGCCTGCGGCGCCGAGGGCGCACCCATCCACCGGGGCTACACCTGCA
CGATGTCAGCGCAGCCGGCCATGCAAAGACTGATGGCCAAACACCCGGACTATTTTCGACTGATGCCTACGCCAGTAGCC
GAGGAAGCCACAAAAAATACCCTCTATATTCCCCAGGAAGTTTTCCTGGGAGTTGAGGCCGATATGACAGATATTGCAGC
CGCTATTCGCAAGGTTCAGAACCATTACAGTAGGATTGGCAAGTCGATGAATTCGAACCCAAAGCTCGGAGCAATGCTTG
TCGGCAAGAACAATGGCTGA

Upstream 100 bases:

>100_bases
TGCGGTTGCCCGACGGGCTCGTTTGCTAGGGTTTGTGCCGTGTCAACCCAGACCTTTTGGGCTCTTCGTAACCATGATTA
AAAAGGACTAAGGCTGTCCG

Downstream 100 bases:

>100_bases
TTTAGGGCAAACACCTTCTGTGCTATGAATCTAGGAGTCGTCGGTTGTGGACATGTCGCGGATTCGTACGGATGCACTCT
CGCCAACTATTCAAATCTCC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: Putative L-glutamine:amino-DOI aminotransferase [H]

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MNTKAKRLVKVLLRQTIGRVPPSVSRLTGRLAKDGGQPVRDTRLRPWASYQAENRSAWLASVKPAFRKIFVDGVEGLPQP
TAKQFAQQWAEYCGCRYGLLMAHGTDALRIALAAALDHDGLDYGGEVIVPNLSFIATAAAALDRRCGIVFVDVEPTTLLL
NPRCVEEAILPGRTRAIMPVHLFGQPANMTALREIAQRYKLKLIEDAAQAHGSVWESGPVGSLGDAAAFSFQSFKNLTCG
EGGALTTNDEDLFERAYSMHNVGRSRQHNQRWEHITLGWNCRITEYQAALLTSRFRDFERQQERRRNNFLKLHELLADVA
CVVPLSMSPGVRKHGVHMLALRYKDEECGGLPVEDFLRACGAEGAPIHRGYTCTMSAQPAMQRLMAKHPDYFRLMPTPVA
EEATKNTLYIPQEVFLGVEADMTDIAAAIRKVQNHYSRIGKSMNSNPKLGAMLVGKNNG

Sequences:

>Translated_459_residues
MNTKAKRLVKVLLRQTIGRVPPSVSRLTGRLAKDGGQPVRDTRLRPWASYQAENRSAWLASVKPAFRKIFVDGVEGLPQP
TAKQFAQQWAEYCGCRYGLLMAHGTDALRIALAAALDHDGLDYGGEVIVPNLSFIATAAAALDRRCGIVFVDVEPTTLLL
NPRCVEEAILPGRTRAIMPVHLFGQPANMTALREIAQRYKLKLIEDAAQAHGSVWESGPVGSLGDAAAFSFQSFKNLTCG
EGGALTTNDEDLFERAYSMHNVGRSRQHNQRWEHITLGWNCRITEYQAALLTSRFRDFERQQERRRNNFLKLHELLADVA
CVVPLSMSPGVRKHGVHMLALRYKDEECGGLPVEDFLRACGAEGAPIHRGYTCTMSAQPAMQRLMAKHPDYFRLMPTPVA
EEATKNTLYIPQEVFLGVEADMTDIAAAIRKVQNHYSRIGKSMNSNPKLGAMLVGKNNG
>Mature_459_residues
MNTKAKRLVKVLLRQTIGRVPPSVSRLTGRLAKDGGQPVRDTRLRPWASYQAENRSAWLASVKPAFRKIFVDGVEGLPQP
TAKQFAQQWAEYCGCRYGLLMAHGTDALRIALAAALDHDGLDYGGEVIVPNLSFIATAAAALDRRCGIVFVDVEPTTLLL
NPRCVEEAILPGRTRAIMPVHLFGQPANMTALREIAQRYKLKLIEDAAQAHGSVWESGPVGSLGDAAAFSFQSFKNLTCG
EGGALTTNDEDLFERAYSMHNVGRSRQHNQRWEHITLGWNCRITEYQAALLTSRFRDFERQQERRRNNFLKLHELLADVA
CVVPLSMSPGVRKHGVHMLALRYKDEECGGLPVEDFLRACGAEGAPIHRGYTCTMSAQPAMQRLMAKHPDYFRLMPTPVA
EEATKNTLYIPQEVFLGVEADMTDIAAAIRKVQNHYSRIGKSMNSNPKLGAMLVGKNNG

Specific function: Catalyzes the transamination of 3-amino-2,3-dideoxy- scyllo-inosose (amino-DOI) into 2-deoxystreptamine (DOS) (Potential) [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. L-glutamine:2- deoxy-scyllo-inosose/scyllo-inosose aminotransferase subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=278, Percent_Identity=30.9352517985612, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI2367285, Length=273, Percent_Identity=32.967032967033, Blast_Score=114, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 50897; Mature: 50897

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKAKRLVKVLLRQTIGRVPPSVSRLTGRLAKDGGQPVRDTRLRPWASYQAENRSAWLA
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCHHCCCCCCCHHHH
SVKPAFRKIFVDGVEGLPQPTAKQFAQQWAEYCGCRYGLLMAHGTDALRIALAAALDHDG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCC
LDYGGEVIVPNLSFIATAAAALDRRCGIVFVDVEPTTLLLNPRCVEEAILPGRTRAIMPV
CCCCCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCHHHHHHHCCCCCCEEEEE
HLFGQPANMTALREIAQRYKLKLIEDAAQAHGSVWESGPVGSLGDAAAFSFQSFKNLTCG
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
EGGALTTNDEDLFERAYSMHNVGRSRQHNQRWEHITLGWNCRITEYQAALLTSRFRDFER
CCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEECEEEEEHHHHHHHHHHHHHHHHH
QQERRRNNFLKLHELLADVACVVPLSMSPGVRKHGVHMLALRYKDEECGGLPVEDFLRAC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCEEEEEEEECCCCCCCCCHHHHHHHC
GAEGAPIHRGYTCTMSAQPAMQRLMAKHPDYFRLMPTPVAEEATKNTLYIPQEVFLGVEA
CCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEECCCCHHHHHCCCEEECCHHHHCCCCC
DMTDIAAAIRKVQNHYSRIGKSMNSNPKLGAMLVGKNNG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MNTKAKRLVKVLLRQTIGRVPPSVSRLTGRLAKDGGQPVRDTRLRPWASYQAENRSAWLA
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCHHCCCCCCCHHHH
SVKPAFRKIFVDGVEGLPQPTAKQFAQQWAEYCGCRYGLLMAHGTDALRIALAAALDHDG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCC
LDYGGEVIVPNLSFIATAAAALDRRCGIVFVDVEPTTLLLNPRCVEEAILPGRTRAIMPV
CCCCCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCHHHHHHHCCCCCCEEEEE
HLFGQPANMTALREIAQRYKLKLIEDAAQAHGSVWESGPVGSLGDAAAFSFQSFKNLTCG
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
EGGALTTNDEDLFERAYSMHNVGRSRQHNQRWEHITLGWNCRITEYQAALLTSRFRDFER
CCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEECEEEEEHHHHHHHHHHHHHHHHH
QQERRRNNFLKLHELLADVACVVPLSMSPGVRKHGVHMLALRYKDEECGGLPVEDFLRAC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCEEEEEEEECCCCCCCCCHHHHHHHC
GAEGAPIHRGYTCTMSAQPAMQRLMAKHPDYFRLMPTPVAEEATKNTLYIPQEVFLGVEA
CCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEECCCCHHHHHCCCEEECCHHHHCCCCC
DMTDIAAAIRKVQNHYSRIGKSMNSNPKLGAMLVGKNNG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA