Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116623692

Identifier: 116623692

GI number: 116623692

Start: 5817856

End: 5820702

Strand: Direct

Name: 116623692

Synonym: Acid_4604

Alternate gene names: NA

Gene position: 5817856-5820702 (Clockwise)

Preceding gene: 116623691

Following gene: 116623693

Centisome position: 58.38

GC content: 65.54

Gene sequence:

>2847_bases
GTGACGCGCCTGGGACTCCTCGCACTCTTTGCGGCAGCCGCGCTCGCGGCTGCCGTCCCACCTTCGGACTACGGAAAACT
CCCCCTCCATTTTGAAGAGAACCGCGGGCAGACCGACGCGCGCGTGCGCTACCTCGCGCGCTCGGCCGATCGCACGCTGT
TTCTCACCGCCGATGGCGCGGTCCTGAGCGCCGGCGGCGTTGCCGTGCGCCTGCGCCTGCGCGGAATCGACCGGCGGGCG
TCGATCGAAGGCATCGATCGGCAGGCCGGCGTCAGCAACTATCTCGGCCGCCGGCCGCTCACGGCTGTCCCGCAGTTCGC
GCGCGTGCGTTATCGCAATGCGTGGCCGGGAATCGACGTAGTCTTCTATGGGACGGCCGGCCAGTTGGAATACGACTTTA
TCGTCGCTCCGGGAGCCGACCCGCGCCGCATCCGGCTCGAGTTCGAAGGCGCCGGCACCCTTCGCCGCGAGGCCGGCGAC
CTGGTGTTCAGTACTGCCGCCGGCGAACTGCGCCAGCGCGCTCCCATGATTTACCAGGCCGGCAGGCAAGTGGGCGGCGG
CTACACGCTGCACGGACAGCAGGTGGGCTTTGCGCTCGCTGCGTACGATCGCACCCAGCCGCTGGTGATCGACCCGATGC
TGACTTACAATGCGCGCTTCGGAGCGCGCGGCCCTTCGTTCAACACCACCGTTCCCGGCCTGAATGGCTTCGACCGCGGC
GGCGCGGCGATCGCGGCGGATGCCGCCGGGAATGCTTACGTCGTCGGCGCGGCATACACCGCCGATTTTCCCTCGACTCC
CGGCGTGTTCCAGCCGGCCTTGCACACCGGAACCGGCGGCGCTGGTGGAATTCAGCCCAACGACGTCTTCGTGATGAAGC
TGAATTCCACCGGCTCGGCGCTGGTCTACTCCACCTTCCTCGGCGGCGCCGGCGATGACGTTTCCACCGGGATCGCGCTC
GATCCCGATGGCAATGTCTATCTGTGCGGCACCACCAACTCCGCGGATTTTCCGACCACGCCGGGCGCTTTCATCGCCGC
CTCGCCGATCCCCGGAGGGTATACCGGGTTCGTCGCCAAGATCGACGCGGACGCGACCAAATTGCTGTACTCCACCTACC
TCGGGGGCACGTCGATCGCCACCGACATCCGCGGCATCGCGATCGATAGCGCGCGCAATATGTACGTTACCGGCGTCACC
GGCGGCGTCAACTTTCCAGTAACTCCGGGCGCCTTCCGCACCACTGCCCCGCAGTTCGCGTTCAGCGCCTTCGTCACCAA
ATTCAATGCCGCCGGCACCGCGCTGGTCTATTCGACGTTTCTCGGCATGGCGTCCGGCAATTTCGGGTCGGCGCAGCCTC
CCATCGCCAACATGGGCATCGCGGTGGACAGCACCGGCAATGCCTACGTCGGCGGCTTCACGGGCGACCGGAGTTTCCCC
ACCACCAGCGGCGCCTTTCAACCCGCCATCAACCAGACCGTGGCCGGGAGCGGCTTCGTCACCAAGCTCAATGCCGCCGG
CAGCGATCTGATCTTCTCGACTTATCTCGGCGGCAGTTATTACGACGGCGTGGATGCGCTGGCGCTCGGCCCCGATGGCA
GCGTCTACGTGACCGGCCACGCATCGTCCACCAATTTCCCGACCACGGCGGGAGCCTTCATGACGGCGCCGAATCCCGAG
TTTCCCGCCGGCACCGTGATTCGCTATCCGCCGTACGGCTTTGTCTCGCGGCTCAAGCCCGATGGCAGCGGCCTCATTTA
TTCGACGTACATCGGCGGTGGCGGCAGCATCATCATGGGAGCCATCGCGGTAGATCCGCAGGGGAACGCCTTCGTGATCG
GCGCGGCCGATTCCACCAGCTTCCCCACGACTCCCGGCGCCATCCAGCCCTGCCTCGAAGATCCCAGCGGGTTTTCCAAC
GCGATCCTTTTTAAGCTCGATCCCAACGGCAGCCGCCTGCTGTACTCGACATTCCTCGGCGGCAACGTCCGCGATCAGGG
CTTCGGAATTGCCCTGGATAAGGATGGCAATGCCTACGTCACCGGCATGAGCGATTCCACCACATTTGTAACCACGCCGG
GCGCGGCTGGTATCCCGACCGGGCAGGCTTTCATCGCCAAGGTCAATTTCGCAACACCCACGCCCGCTGGCGTGACCTGC
GTTGCCAATACGGCTAGTATGGTCCCAGGTCCGGTAGCGGCAGGCGAGATCGTGAGCATCTTCGGCACCGGACTCGGCCC
CGCGGACCCGCAGAGCGGCGTCGTCGTCAACGGCGCGTTCACCACTTCGCTGGGCGGCACCCGGCTGCTGTTCGATGGCG
TCGCCGCGCCGCTGCTGATGGTCTCCGGAAATCAGATCAACGCCATTGTGCCCTCGCCCGTAAGGTTCCGCGCGCAGACC
GTGATGCAGGTCGAAGTCGGCGGCAAGCTCTTCCCCGCCCAGACGCTGGATGTCGCGATCTCTTCGCCAGCCGTCTTTAC
GGTAAACGGCACCGGCACGGGATGGGCAGCGGCCCTCAATCAGGATGGCACCGTAAACTCGCCGGCGAACCCAGCGGCGC
GCGGCTCGGTGGTCTGGCTGTTCGCCAATAGCGCCGGCCCCTGGCAGCCCGTGCTCGGCGATGGACTCGTGCTCGCCGAC
GCGCACCCGATCCAGATCTTCCCCACCGTCCAACTCAGCACCAACCAAGTACCCGTGAATTATAACGGCAATTCGCCCGG
CTCGGTCACCGCTCTCTGGCAGTTGAATGTCTTCATTCCGCAGACCCTGTTCCCTTCCACCGCCCTGCAAGTACACATCA
CCGGCCCGAACGCCCTCACCCAACGGGTCACAATCGCGATCAAGTAA

Upstream 100 bases:

>100_bases
ACGTACAAAATGACCCTCGCCTCCGCCGGCGGCAACAAGGGCACCCTCACCCTGGAATGGGAAAACAAGAAAGCCAGCGT
GGATTTCACGGCAAAGTAAC

Downstream 100 bases:

>100_bases
GTTGCGCGCGACACCCGCTTCTGGTATACCTGTTCACCATTACCTTTCCCCACGTCCGGGCAACGTAAAAAGGGGTTAGC
AATGTATTTACCTACGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 948; Mature: 947

Protein sequence:

>948_residues
MTRLGLLALFAAAALAAAVPPSDYGKLPLHFEENRGQTDARVRYLARSADRTLFLTADGAVLSAGGVAVRLRLRGIDRRA
SIEGIDRQAGVSNYLGRRPLTAVPQFARVRYRNAWPGIDVVFYGTAGQLEYDFIVAPGADPRRIRLEFEGAGTLRREAGD
LVFSTAAGELRQRAPMIYQAGRQVGGGYTLHGQQVGFALAAYDRTQPLVIDPMLTYNARFGARGPSFNTTVPGLNGFDRG
GAAIAADAAGNAYVVGAAYTADFPSTPGVFQPALHTGTGGAGGIQPNDVFVMKLNSTGSALVYSTFLGGAGDDVSTGIAL
DPDGNVYLCGTTNSADFPTTPGAFIAASPIPGGYTGFVAKIDADATKLLYSTYLGGTSIATDIRGIAIDSARNMYVTGVT
GGVNFPVTPGAFRTTAPQFAFSAFVTKFNAAGTALVYSTFLGMASGNFGSAQPPIANMGIAVDSTGNAYVGGFTGDRSFP
TTSGAFQPAINQTVAGSGFVTKLNAAGSDLIFSTYLGGSYYDGVDALALGPDGSVYVTGHASSTNFPTTAGAFMTAPNPE
FPAGTVIRYPPYGFVSRLKPDGSGLIYSTYIGGGGSIIMGAIAVDPQGNAFVIGAADSTSFPTTPGAIQPCLEDPSGFSN
AILFKLDPNGSRLLYSTFLGGNVRDQGFGIALDKDGNAYVTGMSDSTTFVTTPGAAGIPTGQAFIAKVNFATPTPAGVTC
VANTASMVPGPVAAGEIVSIFGTGLGPADPQSGVVVNGAFTTSLGGTRLLFDGVAAPLLMVSGNQINAIVPSPVRFRAQT
VMQVEVGGKLFPAQTLDVAISSPAVFTVNGTGTGWAAALNQDGTVNSPANPAARGSVVWLFANSAGPWQPVLGDGLVLAD
AHPIQIFPTVQLSTNQVPVNYNGNSPGSVTALWQLNVFIPQTLFPSTALQVHITGPNALTQRVTIAIK

Sequences:

>Translated_948_residues
MTRLGLLALFAAAALAAAVPPSDYGKLPLHFEENRGQTDARVRYLARSADRTLFLTADGAVLSAGGVAVRLRLRGIDRRA
SIEGIDRQAGVSNYLGRRPLTAVPQFARVRYRNAWPGIDVVFYGTAGQLEYDFIVAPGADPRRIRLEFEGAGTLRREAGD
LVFSTAAGELRQRAPMIYQAGRQVGGGYTLHGQQVGFALAAYDRTQPLVIDPMLTYNARFGARGPSFNTTVPGLNGFDRG
GAAIAADAAGNAYVVGAAYTADFPSTPGVFQPALHTGTGGAGGIQPNDVFVMKLNSTGSALVYSTFLGGAGDDVSTGIAL
DPDGNVYLCGTTNSADFPTTPGAFIAASPIPGGYTGFVAKIDADATKLLYSTYLGGTSIATDIRGIAIDSARNMYVTGVT
GGVNFPVTPGAFRTTAPQFAFSAFVTKFNAAGTALVYSTFLGMASGNFGSAQPPIANMGIAVDSTGNAYVGGFTGDRSFP
TTSGAFQPAINQTVAGSGFVTKLNAAGSDLIFSTYLGGSYYDGVDALALGPDGSVYVTGHASSTNFPTTAGAFMTAPNPE
FPAGTVIRYPPYGFVSRLKPDGSGLIYSTYIGGGGSIIMGAIAVDPQGNAFVIGAADSTSFPTTPGAIQPCLEDPSGFSN
AILFKLDPNGSRLLYSTFLGGNVRDQGFGIALDKDGNAYVTGMSDSTTFVTTPGAAGIPTGQAFIAKVNFATPTPAGVTC
VANTASMVPGPVAAGEIVSIFGTGLGPADPQSGVVVNGAFTTSLGGTRLLFDGVAAPLLMVSGNQINAIVPSPVRFRAQT
VMQVEVGGKLFPAQTLDVAISSPAVFTVNGTGTGWAAALNQDGTVNSPANPAARGSVVWLFANSAGPWQPVLGDGLVLAD
AHPIQIFPTVQLSTNQVPVNYNGNSPGSVTALWQLNVFIPQTLFPSTALQVHITGPNALTQRVTIAIK
>Mature_947_residues
TRLGLLALFAAAALAAAVPPSDYGKLPLHFEENRGQTDARVRYLARSADRTLFLTADGAVLSAGGVAVRLRLRGIDRRAS
IEGIDRQAGVSNYLGRRPLTAVPQFARVRYRNAWPGIDVVFYGTAGQLEYDFIVAPGADPRRIRLEFEGAGTLRREAGDL
VFSTAAGELRQRAPMIYQAGRQVGGGYTLHGQQVGFALAAYDRTQPLVIDPMLTYNARFGARGPSFNTTVPGLNGFDRGG
AAIAADAAGNAYVVGAAYTADFPSTPGVFQPALHTGTGGAGGIQPNDVFVMKLNSTGSALVYSTFLGGAGDDVSTGIALD
PDGNVYLCGTTNSADFPTTPGAFIAASPIPGGYTGFVAKIDADATKLLYSTYLGGTSIATDIRGIAIDSARNMYVTGVTG
GVNFPVTPGAFRTTAPQFAFSAFVTKFNAAGTALVYSTFLGMASGNFGSAQPPIANMGIAVDSTGNAYVGGFTGDRSFPT
TSGAFQPAINQTVAGSGFVTKLNAAGSDLIFSTYLGGSYYDGVDALALGPDGSVYVTGHASSTNFPTTAGAFMTAPNPEF
PAGTVIRYPPYGFVSRLKPDGSGLIYSTYIGGGGSIIMGAIAVDPQGNAFVIGAADSTSFPTTPGAIQPCLEDPSGFSNA
ILFKLDPNGSRLLYSTFLGGNVRDQGFGIALDKDGNAYVTGMSDSTTFVTTPGAAGIPTGQAFIAKVNFATPTPAGVTCV
ANTASMVPGPVAAGEIVSIFGTGLGPADPQSGVVVNGAFTTSLGGTRLLFDGVAAPLLMVSGNQINAIVPSPVRFRAQTV
MQVEVGGKLFPAQTLDVAISSPAVFTVNGTGTGWAAALNQDGTVNSPANPAARGSVVWLFANSAGPWQPVLGDGLVLADA
HPIQIFPTVQLSTNQVPVNYNGNSPGSVTALWQLNVFIPQTLFPSTALQVHITGPNALTQRVTIAIK

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97374; Mature: 97242

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLGLLALFAAAALAAAVPPSDYGKLPLHFEENRGQTDARVRYLARSADRTLFLTADGA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCC
VLSAGGVAVRLRLRGIDRRASIEGIDRQAGVSNYLGRRPLTAVPQFARVRYRNAWPGIDV
EEECCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCHHCCHHHHHEECCCCCCEEE
VFYGTAGQLEYDFIVAPGADPRRIRLEFEGAGTLRREAGDLVFSTAAGELRQRAPMIYQA
EEECCCCCEEEEEEECCCCCCEEEEEEECCCCCEECCCCCEEEEECHHHHHHHCCHHHHH
GRQVGGGYTLHGQQVGFALAAYDRTQPLVIDPMLTYNARFGARGPSFNTTVPGLNGFDRG
CHHCCCCEEEECCCCEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCC
GAAIAADAAGNAYVVGAAYTADFPSTPGVFQPALHTGTGGAGGIQPNDVFVMKLNSTGSA
CCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCE
LVYSTFLGGAGDDVSTGIALDPDGNVYLCGTTNSADFPTTPGAFIAASPIPGGYTGFVAK
EEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEE
IDADATKLLYSTYLGGTSIATDIRGIAIDSARNMYVTGVTGGVNFPVTPGAFRTTAPQFA
ECCCHHHHHHHHHCCCCCHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHH
FSAFVTKFNAAGTALVYSTFLGMASGNFGSAQPPIANMGIAVDSTGNAYVGGFTGDRSFP
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCEEEECCCCEEEECCCCCCCCC
TTSGAFQPAINQTVAGSGFVTKLNAAGSDLIFSTYLGGSYYDGVDALALGPDGSVYVTGH
CCCCCCCCCCCCEECCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEC
ASSTNFPTTAGAFMTAPNPEFPAGTVIRYPPYGFVSRLKPDGSGLIYSTYIGGGGSIIMG
CCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEECCCCCEEEE
AIAVDPQGNAFVIGAADSTSFPTTPGAIQPCLEDPSGFSNAILFKLDPNGSRLLYSTFLG
EEEECCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEEECC
GNVRDQGFGIALDKDGNAYVTGMSDSTTFVTTPGAAGIPTGQAFIAKVNFATPTPAGVTC
CCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEE
VANTASMVPGPVAAGEIVSIFGTGLGPADPQSGVVVNGAFTTSLGGTRLLFDGVAAPLLM
EECCHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEE
VSGNQINAIVPSPVRFRAQTVMQVEVGGKLFPAQTLDVAISSPAVFTVNGTGTGWAAALN
EECCEEEEECCCCCEEEEEEEEEEEECCEECCCCEEEEEECCCEEEEEECCCCCEEEEEC
QDGTVNSPANPAARGSVVWLFANSAGPWQPVLGDGLVLADAHPIQIFPTVQLSTNQVPVN
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCEEEEE
YNGNSPGSVTALWQLNVFIPQTLFPSTALQVHITGPNALTQRVTIAIK
ECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEC
>Mature Secondary Structure 
TRLGLLALFAAAALAAAVPPSDYGKLPLHFEENRGQTDARVRYLARSADRTLFLTADGA
CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCC
VLSAGGVAVRLRLRGIDRRASIEGIDRQAGVSNYLGRRPLTAVPQFARVRYRNAWPGIDV
EEECCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCHHCCHHHHHEECCCCCCEEE
VFYGTAGQLEYDFIVAPGADPRRIRLEFEGAGTLRREAGDLVFSTAAGELRQRAPMIYQA
EEECCCCCEEEEEEECCCCCCEEEEEEECCCCCEECCCCCEEEEECHHHHHHHCCHHHHH
GRQVGGGYTLHGQQVGFALAAYDRTQPLVIDPMLTYNARFGARGPSFNTTVPGLNGFDRG
CHHCCCCEEEECCCCEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCC
GAAIAADAAGNAYVVGAAYTADFPSTPGVFQPALHTGTGGAGGIQPNDVFVMKLNSTGSA
CCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCE
LVYSTFLGGAGDDVSTGIALDPDGNVYLCGTTNSADFPTTPGAFIAASPIPGGYTGFVAK
EEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEE
IDADATKLLYSTYLGGTSIATDIRGIAIDSARNMYVTGVTGGVNFPVTPGAFRTTAPQFA
ECCCHHHHHHHHHCCCCCHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHH
FSAFVTKFNAAGTALVYSTFLGMASGNFGSAQPPIANMGIAVDSTGNAYVGGFTGDRSFP
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCEEEECCCCEEEECCCCCCCCC
TTSGAFQPAINQTVAGSGFVTKLNAAGSDLIFSTYLGGSYYDGVDALALGPDGSVYVTGH
CCCCCCCCCCCCEECCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEC
ASSTNFPTTAGAFMTAPNPEFPAGTVIRYPPYGFVSRLKPDGSGLIYSTYIGGGGSIIMG
CCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEECCCCCEEEE
AIAVDPQGNAFVIGAADSTSFPTTPGAIQPCLEDPSGFSNAILFKLDPNGSRLLYSTFLG
EEEECCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEEECC
GNVRDQGFGIALDKDGNAYVTGMSDSTTFVTTPGAAGIPTGQAFIAKVNFATPTPAGVTC
CCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEE
VANTASMVPGPVAAGEIVSIFGTGLGPADPQSGVVVNGAFTTSLGGTRLLFDGVAAPLLM
EECCHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEE
VSGNQINAIVPSPVRFRAQTVMQVEVGGKLFPAQTLDVAISSPAVFTVNGTGTGWAAALN
EECCEEEEECCCCCEEEEEEEEEEEECCEECCCCEEEEEECCCEEEEEECCCCCEEEEEC
QDGTVNSPANPAARGSVVWLFANSAGPWQPVLGDGLVLADAHPIQIFPTVQLSTNQVPVN
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCEEEEE
YNGNSPGSVTALWQLNVFIPQTLFPSTALQVHITGPNALTQRVTIAIK
ECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA