| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is mmlH [H]
Identifier: 116623651
GI number: 116623651
Start: 5769664
End: 5770875
Strand: Reverse
Name: mmlH [H]
Synonym: Acid_4563
Alternate gene names: 116623651
Gene position: 5770875-5769664 (Counterclockwise)
Preceding gene: 116623654
Following gene: 116623650
Centisome position: 57.91
GC content: 65.76
Gene sequence:
>1212_bases GTGCAGGCCTGGTACCGGGAAATCAATCGCGCGCAATGGCGTACCCTGATCGCCGCCCAACTGGGATGGATGCTCGACGC CATGGACGTGATGCTCTATTCCTTTGCGCTGACTGCGATTCGTACCGAATTCCACCTGACCGCGGCCGCCGCCGGGGCAC TGGGTGCCGCTCCCCTGGTCACTTCCGCCCTGGGCGGCATGCTCTTCGGCTGGCTCAGCGACCGTTACGGGCGATCCCGC GCGCTGGTCTGGTCTATTCTGACGTTTTCCGCCTTCACTGCCTTCACCGCGACCGCCCGCACCATTCCCGAATTGATCTT CTGGCGCTCGATCGTCGGTATCGGGCTCGGCGGCGAGTGGGCGGCCGGCGCGGTACTGGTGGCCGAAACGTGGCCGGAGC GGCACCGGGGCAAGGCCATCGGGCTGATGCAATCGGCGTGGGCGATCGGCTACCTGCTGGCGGCGCTGCTGGCGGGGTTC ATGCTGCCCCGATTTGGCTGGAGGCCGTTGTTCCTCGCCGGAATTGTACCGGCGCTGATCACCCTCTGGATCCGCCGCAA CATTCCCGAGCCGCCCAAATGGCAACAGCCGTCGCACAGTCTGTGGGGCGCGCTGGGGGCGCTTTTCCGGGCGCCGCTGC TGCGCAATGTCATGTTGTTCACCGCGCTTTGTTCGAGCGTCCTGTTCGGCTATTGGGGAATGTTCACCTGGCTGCCGGCC TATCTTTCCATGCCGGTGTCGCAGGGCGGCGCCGGCCTCAGTATCCTGCGCTCGTCCGCCTGGATCATTCCCTTACAGAT CGGCGCGTTTTTCGGTTACATGTCTTTCGGTTTCTACGCCGACCGGGTGGGCCGGCGGGCCGCGTTTCTTACGTTCGTCC TCACCACCGCGGTGCTGGTGCCGGTTTATGGTCTGTTCGGCCGCAACGCCGCCCTGCTGCTGGCGCTCGGTCCACTGGTC GGGTTTTTCGGGCATGGATATTTCAGCGCATTGGGAGCGATGGCGGCCGAGCTTTTTCCCGCGGCTGTGCGAACCACCGC GCAGGGGTTCGGTTATAACGCCGGCCGCGCGCTCAGCGGCCTCGCGCCGGTGACCGTGGGCGCGCTTGCGGACCGCCACG GCATCGGCGCCGCCCTTGCCTTCACGTCCATCTTCTTTATCCTGGGCGCTGGGCTGATGATGTTGGTGCCTGCGGAGACA CCCCCCGTGTGA
Upstream 100 bases:
>100_bases ACCGGGATGGAAGTGCCAAATAAATTGGAACTTCCTGCAAAGAAAAGGCAAACCGCTTTGCGAGCACCCCGATTGCCTTT CGCGGTACCTTTATAAGACC
Downstream 100 bases:
>100_bases CACGTCTCGTCCGCAGCGAGCTTCGCTCGGCTGCGCGCAAGCTCAAGCGTGCGCCACCAACGACGACGCTGTTCAGTGGT GGGGCATGCTTTTGCCTGCC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MQAWYREINRAQWRTLIAAQLGWMLDAMDVMLYSFALTAIRTEFHLTAAAAGALGAAPLVTSALGGMLFGWLSDRYGRSR ALVWSILTFSAFTAFTATARTIPELIFWRSIVGIGLGGEWAAGAVLVAETWPERHRGKAIGLMQSAWAIGYLLAALLAGF MLPRFGWRPLFLAGIVPALITLWIRRNIPEPPKWQQPSHSLWGALGALFRAPLLRNVMLFTALCSSVLFGYWGMFTWLPA YLSMPVSQGGAGLSILRSSAWIIPLQIGAFFGYMSFGFYADRVGRRAAFLTFVLTTAVLVPVYGLFGRNAALLLALGPLV GFFGHGYFSALGAMAAELFPAAVRTTAQGFGYNAGRALSGLAPVTVGALADRHGIGAALAFTSIFFILGAGLMMLVPAET PPV
Sequences:
>Translated_403_residues MQAWYREINRAQWRTLIAAQLGWMLDAMDVMLYSFALTAIRTEFHLTAAAAGALGAAPLVTSALGGMLFGWLSDRYGRSR ALVWSILTFSAFTAFTATARTIPELIFWRSIVGIGLGGEWAAGAVLVAETWPERHRGKAIGLMQSAWAIGYLLAALLAGF MLPRFGWRPLFLAGIVPALITLWIRRNIPEPPKWQQPSHSLWGALGALFRAPLLRNVMLFTALCSSVLFGYWGMFTWLPA YLSMPVSQGGAGLSILRSSAWIIPLQIGAFFGYMSFGFYADRVGRRAAFLTFVLTTAVLVPVYGLFGRNAALLLALGPLV GFFGHGYFSALGAMAAELFPAAVRTTAQGFGYNAGRALSGLAPVTVGALADRHGIGAALAFTSIFFILGAGLMMLVPAET PPV >Mature_403_residues MQAWYREINRAQWRTLIAAQLGWMLDAMDVMLYSFALTAIRTEFHLTAAAAGALGAAPLVTSALGGMLFGWLSDRYGRSR ALVWSILTFSAFTAFTATARTIPELIFWRSIVGIGLGGEWAAGAVLVAETWPERHRGKAIGLMQSAWAIGYLLAALLAGF MLPRFGWRPLFLAGIVPALITLWIRRNIPEPPKWQQPSHSLWGALGALFRAPLLRNVMLFTALCSSVLFGYWGMFTWLPA YLSMPVSQGGAGLSILRSSAWIIPLQIGAFFGYMSFGFYADRVGRRAAFLTFVLTTAVLVPVYGLFGRNAALLLALGPLV GFFGHGYFSALGAMAAELFPAAVRTTAQGFGYNAGRALSGLAPVTVGALADRHGIGAALAFTSIFFILGAGLMMLVPAET PPV
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=201, Percent_Identity=30.3482587064677, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI213021148, Length=196, Percent_Identity=30.6122448979592, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI7662270, Length=198, Percent_Identity=24.7474747474747, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI87082404, Length=401, Percent_Identity=28.1795511221945, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI87082231, Length=194, Percent_Identity=40.2061855670103, Blast_Score=157, Evalue=8e-40, Organism=Escherichia coli, GI1790550, Length=398, Percent_Identity=26.3819095477387, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI87081723, Length=317, Percent_Identity=31.5457413249211, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87082159, Length=191, Percent_Identity=32.4607329842932, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788292, Length=394, Percent_Identity=25.6345177664975, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786229, Length=191, Percent_Identity=26.7015706806283, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1790463, Length=212, Percent_Identity=28.3018867924528, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788942, Length=328, Percent_Identity=24.0853658536585, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1789515, Length=396, Percent_Identity=25, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI32564663, Length=214, Percent_Identity=29.4392523364486, Blast_Score=85, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6323735, Length=228, Percent_Identity=28.9473684210526, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI19922874, Length=418, Percent_Identity=22.9665071770335, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43426; Mature: 43426
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAWYREINRAQWRTLIAAQLGWMLDAMDVMLYSFALTAIRTEFHLTAAAAGALGAAPLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TSALGGMLFGWLSDRYGRSRALVWSILTFSAFTAFTATARTIPELIFWRSIVGIGLGGEW HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AAGAVLVAETWPERHRGKAIGLMQSAWAIGYLLAALLAGFMLPRFGWRPLFLAGIVPALI HCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TLWIRRNIPEPPKWQQPSHSLWGALGALFRAPLLRNVMLFTALCSSVLFGYWGMFTWLPA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLSMPVSQGGAGLSILRSSAWIIPLQIGAFFGYMSFGFYADRVGRRAAFLTFVLTTAVLV HHHCCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVYGLFGRNAALLLALGPLVGFFGHGYFSALGAMAAELFPAAVRTTAQGFGYNAGRALSG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC LAPVTVGALADRHGIGAALAFTSIFFILGAGLMMLVPAETPPV CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHEEECCCCCCC >Mature Secondary Structure MQAWYREINRAQWRTLIAAQLGWMLDAMDVMLYSFALTAIRTEFHLTAAAAGALGAAPLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TSALGGMLFGWLSDRYGRSRALVWSILTFSAFTAFTATARTIPELIFWRSIVGIGLGGEW HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AAGAVLVAETWPERHRGKAIGLMQSAWAIGYLLAALLAGFMLPRFGWRPLFLAGIVPALI HCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TLWIRRNIPEPPKWQQPSHSLWGALGALFRAPLLRNVMLFTALCSSVLFGYWGMFTWLPA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLSMPVSQGGAGLSILRSSAWIIPLQIGAFFGYMSFGFYADRVGRRAAFLTFVLTTAVLV HHHCCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVYGLFGRNAALLLALGPLVGFFGHGYFSALGAMAAELFPAAVRTTAQGFGYNAGRALSG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC LAPVTVGALADRHGIGAALAFTSIFFILGAGLMMLVPAETPPV CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]