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The map label for this gene is yncE [C]

Identifier: 116623646

GI number: 116623646

Start: 5759911

End: 5762409

Strand: Reverse

Name: yncE [C]

Synonym: Acid_4558

Alternate gene names: 116623646

Gene position: 5762409-5759911 (Counterclockwise)

Preceding gene: 116623647

Following gene: 116623645

Centisome position: 57.82

GC content: 62.83

Gene sequence:

>2499_bases
ATGCGATTGTCATCTGAACGCCGTATGCGCGGGCTATTCTGGCGATTCTCTATGACCCGATTGCCGATTGCCCTGCTCGC
CTGTGGAGTCCTTGCGTCTCCCGGAAACTCACAACAGATTCCGCACGCCATTGCCGGCGGTTACGAACTGCCCAATGGCT
GGCGGCTGACGCCATTGGGACGTGCGATACCTACGGAGGACATGGTGTTGAACGTCTCGGTGGCGCCCGATCGAAAGTCG
GTGGTGGCGCTGCACTCCGGCTTCAATCCGCACGGCATCGTGGTGGTGGACACGCGGTTGGAGGAGGCGGTGCAGCGTAT
ACCGTTGAAATCCGCGTGGCTGGGGCTGGCCTGGCACCCGAACGGCAAGCGCCTGTACGTCTCCGGCGGCAACGCCAACG
GACGCAAGCCGACGCGCGCGCCGATCTACATTTTTGACTACGAGAACGTGCGGCTTTCGAACGAACCCTCGGGCACGCTC
GAAGAGAGCATCGATACCGCGCAGCTCTACTGGTCTGGGCTGGTCCACCATCGCAGCAAGCCGCTTCTGTTCGCGGCCAA
CCGCGGCACCGGGGCGGGGCCGAGCGACGTGGTGGTGTTCGATACCGGCTCGGGAAAGCTGCTGCAGCGCATCCCGGTCG
AGGTGAATCCGTACGCGCTGGTGCTGAGCGATAACGGGCAGACGCTGTATGTATCGAACTGGGGAAGCGATTCGGTGAGC
GTGATCGATGTCAACACGCTCCGCGTCACGGGGCGCATCGGTGTGGGCGACAATCCCAACGATATGGTGCTGTCGAAAGA
CGGACGCCTGTTCGTCTCCTGCGCCAATGACAACACGGTGGCGGTGATCGATACCAAAACGCGGCAGGTGATCGAGCGCG
TTTCGACGGCGCTGACGGCGAACTCGCCCGAAGGCTCCACGCCGAATGCGCTGGCGCTGGATCGCGAGAACCAGATGCTG
TTCGTCGCCAATGCGGATAACAACGATGTCGCCGTGGTGCGGGTCGCGGAGAAGGCCAAGAGCGAGGTGCTCGGTTTCCT
GCCGGTAGGCTGGTATCCCTCGGCGCTCGCGATCAAGGGCGGCAAACTCTATGTGGGGAACAGCAAGGGCATGGGGTCGT
ACTCCGATATTCGCGGCCCGGGCAGTCCGCTGCCGCCGGGCGAGGAAGGCAAGGGCTCGGTGAAGAGCCTCCAGAAGGGC
AGCGTGGAGGTGGTCGATCTTACTCAGTTGAAGACCAACCTGCGCGCCTGGACCAAACAGGTCTACGACAACACGCCGTA
CCACGACGAGCAACTGGTGACGGCCAAGGCTCCCACGACGCCGACCGTGATCCCGCGCGAGGTCGGCGTGGGTTCGCCGA
TCAAGCACGTGCTCTACATCATCAAGGAGAATCGCACCTACGACCAGGTGCTCGGCGATCTCGGCAAGGGCAACGGCGAT
CCGCGGCTGACGATCTTCGGCGAGAAGGTCACCCCCAATCATCACGCGCTGGCCCGCCAGTTCGTGGTGCTCGATAATCT
CTTTTGCGATGGCGAAGTGAGCGTGGACGGACACTCGTGGTCGAACTCGGCCTACGCGACCGACTTCAACGAAAAACTCT
GGCCCGTGACCTACGGCGGTCACAGCAAGGCGAGCGAATCCGCGGCGTACATCCCGGGCGCGGGCCACTTGTGGGACCTC
GCCATGAAGAAGGGGCTGACTTACCGCAGTTACGGCGAGTACGCGACGCGCGCCAGCAACGGCACCACGATGGACGCTTC
GCCCGGTGTCGGCGGCCTGCTCGGGCACGTGTCCCCGAAGTTTAAACTGCCGGGTATGCGCGATACCGATAACGCGGCCG
AATTCATACGCGAGTTCGACGAGTACGAGCGCCACTTCGACGATGCCAGCCCGGCCAAACGCCTGCCCAATTTCATGGTG
ATGAGCCTGCCCGAAGATCACACCGCCGGCACCACTCCGGGACGCTTCACCCCGATCGCCATGGTGGCGAATAACGATTA
CGCCGTCGGCATGATCGTGGATCGCATCACGCACAGCAAGTATTGGCCGGAGACGGCGATCTTCATCATCGAAGACGACG
CGCAGGATGGTCCCGATCACGTGGACGCGAGGCGCACCACCGGTTACGTGGTGAGCCCTTACATTCACCGGCAGACGGTG
GATAGCACGCTGTACACGACGAGTTCTTTCCTGCGCACCATGGAATTGCTGCTCGGGCTGCCGCCGATGAGCCAGTACGA
CGCGGCCGCCAACCCGATGTACGCGAGTTTTTCCGACAAGCCCGACCTGACTCCGTTTGTGCAGATCGCGCCGCAGGTGG
ACGTGATGGAGAAGAATACGCTCCGTGCGTACGGCGCCCGCCGTTCCATGAAGATGGACTTCCGCGACGTGGACGAAGCG
CCCATGGCGGAGTTGAACGAGATTCTGTGGAGGAGCGTCAAGGGCGCCGACGCGATCGTACCGGCGCCGATTCACCGCGT
CCACTTCGTGGGACGGTAG

Upstream 100 bases:

>100_bases
CTGCGGATTGTCCGTCACCAGTTCCGCGACGCGCGGCCGGCCGTGGTTCGTCCGCGACGTGTAGAACGAAACCTGGCCGT
GGCATAGTAGCGCGGTTTTC

Downstream 100 bases:

>100_bases
CTGTGTGACGGTAGCTGTGTGATTTGCCGTCTTCCGCTGCTTGCATTACAATGCGAAGCAGTCCATGGCCGGCACGGAGA
GCGGAAGCGGTCCGCAATTT

Product: YVTN beta-propeller repeat-containing protein

Products: NA

Alternate protein names: YVTN Beta-Propeller Repeat-Containing Protein; Lipoprotein; Surface Antigen Gene; Phosphoesterase; Surface Layer Protein; SMP-30/Gluconolaconase/LRE Domain Protein; Cell Surface Protein; WD40 Domain-Containing Protein; YVTN Family Beta-Propeller Repeat Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Phosphoesterase Family Protein; Triple Helix Repeat-Containing Collagen; YVTN Family Beta-Propeller Repeat-Containing Protein; YVTN Family Beta-Propeller Repeat Family Protein

Number of amino acids: Translated: 832; Mature: 832

Protein sequence:

>832_residues
MRLSSERRMRGLFWRFSMTRLPIALLACGVLASPGNSQQIPHAIAGGYELPNGWRLTPLGRAIPTEDMVLNVSVAPDRKS
VVALHSGFNPHGIVVVDTRLEEAVQRIPLKSAWLGLAWHPNGKRLYVSGGNANGRKPTRAPIYIFDYENVRLSNEPSGTL
EESIDTAQLYWSGLVHHRSKPLLFAANRGTGAGPSDVVVFDTGSGKLLQRIPVEVNPYALVLSDNGQTLYVSNWGSDSVS
VIDVNTLRVTGRIGVGDNPNDMVLSKDGRLFVSCANDNTVAVIDTKTRQVIERVSTALTANSPEGSTPNALALDRENQML
FVANADNNDVAVVRVAEKAKSEVLGFLPVGWYPSALAIKGGKLYVGNSKGMGSYSDIRGPGSPLPPGEEGKGSVKSLQKG
SVEVVDLTQLKTNLRAWTKQVYDNTPYHDEQLVTAKAPTTPTVIPREVGVGSPIKHVLYIIKENRTYDQVLGDLGKGNGD
PRLTIFGEKVTPNHHALARQFVVLDNLFCDGEVSVDGHSWSNSAYATDFNEKLWPVTYGGHSKASESAAYIPGAGHLWDL
AMKKGLTYRSYGEYATRASNGTTMDASPGVGGLLGHVSPKFKLPGMRDTDNAAEFIREFDEYERHFDDASPAKRLPNFMV
MSLPEDHTAGTTPGRFTPIAMVANNDYAVGMIVDRITHSKYWPETAIFIIEDDAQDGPDHVDARRTTGYVVSPYIHRQTV
DSTLYTTSSFLRTMELLLGLPPMSQYDAAANPMYASFSDKPDLTPFVQIAPQVDVMEKNTLRAYGARRSMKMDFRDVDEA
PMAELNEILWRSVKGADAIVPAPIHRVHFVGR

Sequences:

>Translated_832_residues
MRLSSERRMRGLFWRFSMTRLPIALLACGVLASPGNSQQIPHAIAGGYELPNGWRLTPLGRAIPTEDMVLNVSVAPDRKS
VVALHSGFNPHGIVVVDTRLEEAVQRIPLKSAWLGLAWHPNGKRLYVSGGNANGRKPTRAPIYIFDYENVRLSNEPSGTL
EESIDTAQLYWSGLVHHRSKPLLFAANRGTGAGPSDVVVFDTGSGKLLQRIPVEVNPYALVLSDNGQTLYVSNWGSDSVS
VIDVNTLRVTGRIGVGDNPNDMVLSKDGRLFVSCANDNTVAVIDTKTRQVIERVSTALTANSPEGSTPNALALDRENQML
FVANADNNDVAVVRVAEKAKSEVLGFLPVGWYPSALAIKGGKLYVGNSKGMGSYSDIRGPGSPLPPGEEGKGSVKSLQKG
SVEVVDLTQLKTNLRAWTKQVYDNTPYHDEQLVTAKAPTTPTVIPREVGVGSPIKHVLYIIKENRTYDQVLGDLGKGNGD
PRLTIFGEKVTPNHHALARQFVVLDNLFCDGEVSVDGHSWSNSAYATDFNEKLWPVTYGGHSKASESAAYIPGAGHLWDL
AMKKGLTYRSYGEYATRASNGTTMDASPGVGGLLGHVSPKFKLPGMRDTDNAAEFIREFDEYERHFDDASPAKRLPNFMV
MSLPEDHTAGTTPGRFTPIAMVANNDYAVGMIVDRITHSKYWPETAIFIIEDDAQDGPDHVDARRTTGYVVSPYIHRQTV
DSTLYTTSSFLRTMELLLGLPPMSQYDAAANPMYASFSDKPDLTPFVQIAPQVDVMEKNTLRAYGARRSMKMDFRDVDEA
PMAELNEILWRSVKGADAIVPAPIHRVHFVGR
>Mature_832_residues
MRLSSERRMRGLFWRFSMTRLPIALLACGVLASPGNSQQIPHAIAGGYELPNGWRLTPLGRAIPTEDMVLNVSVAPDRKS
VVALHSGFNPHGIVVVDTRLEEAVQRIPLKSAWLGLAWHPNGKRLYVSGGNANGRKPTRAPIYIFDYENVRLSNEPSGTL
EESIDTAQLYWSGLVHHRSKPLLFAANRGTGAGPSDVVVFDTGSGKLLQRIPVEVNPYALVLSDNGQTLYVSNWGSDSVS
VIDVNTLRVTGRIGVGDNPNDMVLSKDGRLFVSCANDNTVAVIDTKTRQVIERVSTALTANSPEGSTPNALALDRENQML
FVANADNNDVAVVRVAEKAKSEVLGFLPVGWYPSALAIKGGKLYVGNSKGMGSYSDIRGPGSPLPPGEEGKGSVKSLQKG
SVEVVDLTQLKTNLRAWTKQVYDNTPYHDEQLVTAKAPTTPTVIPREVGVGSPIKHVLYIIKENRTYDQVLGDLGKGNGD
PRLTIFGEKVTPNHHALARQFVVLDNLFCDGEVSVDGHSWSNSAYATDFNEKLWPVTYGGHSKASESAAYIPGAGHLWDL
AMKKGLTYRSYGEYATRASNGTTMDASPGVGGLLGHVSPKFKLPGMRDTDNAAEFIREFDEYERHFDDASPAKRLPNFMV
MSLPEDHTAGTTPGRFTPIAMVANNDYAVGMIVDRITHSKYWPETAIFIIEDDAQDGPDHVDARRTTGYVVSPYIHRQTV
DSTLYTTSSFLRTMELLLGLPPMSQYDAAANPMYASFSDKPDLTPFVQIAPQVDVMEKNTLRAYGARRSMKMDFRDVDEA
PMAELNEILWRSVKGADAIVPAPIHRVHFVGR

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90992; Mature: 90992

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSSERRMRGLFWRFSMTRLPIALLACGVLASPGNSQQIPHAIAGGYELPNGWRLTPLG
CCCCHHHHHHHEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEECCCCCEECCCC
RAIPTEDMVLNVSVAPDRKSVVALHSGFNPHGIVVVDTRLEEAVQRIPLKSAWLGLAWHP
CCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECHHHHHHHHCCCCHHEEEEEECC
NGKRLYVSGGNANGRKPTRAPIYIFDYENVRLSNEPSGTLEESIDTAQLYWSGLVHHRSK
CCCEEEEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCHHHCCCHHHHHHHHHHHCCCC
PLLFAANRGTGAGPSDVVVFDTGSGKLLQRIPVEVNPYALVLSDNGQTLYVSNWGSDSVS
CEEEEECCCCCCCCCCEEEEECCCCCCHHCCCCEECCEEEEEECCCCEEEEECCCCCCEE
VIDVNTLRVTGRIGVGDNPNDMVLSKDGRLFVSCANDNTVAVIDTKTRQVIERVSTALTA
EEEEEEEEEEEEECCCCCCCCEEEECCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHCC
NSPEGSTPNALALDRENQMLFVANADNNDVAVVRVAEKAKSEVLGFLPVGWYPSALAIKG
CCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEHHHHHHHEEEEEECCCCCCEEEEEC
GKLYVGNSKGMGSYSDIRGPGSPLPPGEEGKGSVKSLQKGSVEVVDLTQLKTNLRAWTKQ
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHH
VYDNTPYHDEQLVTAKAPTTPTVIPREVGVGSPIKHVLYIIKENRTYDQVLGDLGKGNGD
HHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHCCCCCC
PRLTIFGEKVTPNHHALARQFVVLDNLFCDGEVSVDGHSWSNSAYATDFNEKLWPVTYGG
CEEEEEECCCCCCHHHHHHHHHEECCEEECCEEEECCCCCCCCCEEECCCCCEEEEEECC
HSKASESAAYIPGAGHLWDLAMKKGLTYRSYGEYATRASNGTTMDASPGVGGLLGHVSPK
CCCCCCCCEECCCCCHHHHHHHHCCCCEECCCCHHHCCCCCCEECCCCCCCHHHHCCCCC
FKLPGMRDTDNAAEFIREFDEYERHFDDASPAKRLPNFMVMSLPEDHTAGTTPGRFTPIA
EECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCEEEE
MVANNDYAVGMIVDRITHSKYWPETAIFIIEDDAQDGPDHVDARRTTGYVVSPYIHRQTV
EEECCCEEEEEEEHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHH
DSTLYTTSSFLRTMELLLGLPPMSQYDAAANPMYASFSDKPDLTPFVQIAPQVDVMEKNT
HHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEECCCCCCCCCHHEEECCCCEEECCCH
LRAYGARRSMKMDFRDVDEAPMAELNEILWRSVKGADAIVPAPIHRVHFVGR
HHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MRLSSERRMRGLFWRFSMTRLPIALLACGVLASPGNSQQIPHAIAGGYELPNGWRLTPLG
CCCCHHHHHHHEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEECCCCCEECCCC
RAIPTEDMVLNVSVAPDRKSVVALHSGFNPHGIVVVDTRLEEAVQRIPLKSAWLGLAWHP
CCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECHHHHHHHHCCCCHHEEEEEECC
NGKRLYVSGGNANGRKPTRAPIYIFDYENVRLSNEPSGTLEESIDTAQLYWSGLVHHRSK
CCCEEEEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCHHHCCCHHHHHHHHHHHCCCC
PLLFAANRGTGAGPSDVVVFDTGSGKLLQRIPVEVNPYALVLSDNGQTLYVSNWGSDSVS
CEEEEECCCCCCCCCCEEEEECCCCCCHHCCCCEECCEEEEEECCCCEEEEECCCCCCEE
VIDVNTLRVTGRIGVGDNPNDMVLSKDGRLFVSCANDNTVAVIDTKTRQVIERVSTALTA
EEEEEEEEEEEEECCCCCCCCEEEECCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHCC
NSPEGSTPNALALDRENQMLFVANADNNDVAVVRVAEKAKSEVLGFLPVGWYPSALAIKG
CCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEHHHHHHHEEEEEECCCCCCEEEEEC
GKLYVGNSKGMGSYSDIRGPGSPLPPGEEGKGSVKSLQKGSVEVVDLTQLKTNLRAWTKQ
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHH
VYDNTPYHDEQLVTAKAPTTPTVIPREVGVGSPIKHVLYIIKENRTYDQVLGDLGKGNGD
HHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHCCCCCC
PRLTIFGEKVTPNHHALARQFVVLDNLFCDGEVSVDGHSWSNSAYATDFNEKLWPVTYGG
CEEEEEECCCCCCHHHHHHHHHEECCEEECCEEEECCCCCCCCCEEECCCCCEEEEEECC
HSKASESAAYIPGAGHLWDLAMKKGLTYRSYGEYATRASNGTTMDASPGVGGLLGHVSPK
CCCCCCCCEECCCCCHHHHHHHHCCCCEECCCCHHHCCCCCCEECCCCCCCHHHHCCCCC
FKLPGMRDTDNAAEFIREFDEYERHFDDASPAKRLPNFMVMSLPEDHTAGTTPGRFTPIA
EECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCEEEE
MVANNDYAVGMIVDRITHSKYWPETAIFIIEDDAQDGPDHVDARRTTGYVVSPYIHRQTV
EEECCCEEEEEEEHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHH
DSTLYTTSSFLRTMELLLGLPPMSQYDAAANPMYASFSDKPDLTPFVQIAPQVDVMEKNT
HHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEECCCCCCCCCHHEEECCCCEEECCCH
LRAYGARRSMKMDFRDVDEAPMAELNEILWRSVKGADAIVPAPIHRVHFVGR
HHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA