| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623633
Identifier: 116623633
GI number: 116623633
Start: 5746825
End: 5747382
Strand: Reverse
Name: 116623633
Synonym: Acid_4545
Alternate gene names: NA
Gene position: 5747382-5746825 (Counterclockwise)
Preceding gene: 116623634
Following gene: 116623632
Centisome position: 57.67
GC content: 56.45
Gene sequence:
>558_bases ATGGCGGAATCCAACAACTCGAAACGCAGGCGCCGGCGCGGCGTGGAACTCATCGAGTTCACTCTGGTGATGATGCCGTT GCTGGGATTCATCTTTCTGGTAATCGACTTGGGCTGGACGATCTATAAGCGGGCTACGCTGCAGTTCGCCGTACGCGAAG GCTGCCGGTACGCCGTGATCAATCAACTGCAGCCGTTGAAAGACAGTAACGGCAACAATTATGGAATGATCGACTCCGTC AAGTACGTGGTCCAGCAGAGGGCCATGGGCTTCCTGGGTTCCACGCCGTCCGACCCCGGATATGCCACGATCCAGGTCCG GTTCTATGACCCCAACAGCAGCTTGACCACCGCCGTCGCCATGCCTCCGGATTGCACATCCACGATTGTGCCGAACAAAG GCGGATATCTGGTGGAAGTCTCGGTGGAACACTACAAATCTCAGATTCTCGGCGCCATTTACAAAGGTTCTACGCCATTG GACTTCGTGGCCCGGTCCTCCGACAGAATGGAGGCGGACCCATCCTCCGGCATTCCGAAAGCCTTAACTTGTCCATGA
Upstream 100 bases:
>100_bases GTTCGTATTATCACGCTTATACCCATTGATAGCGTAGCTTGGTAGCCGCCCTCCTGTGCATAATTCCAACGTTGTTAGAG CTGTTTTCTAGCGAAACTCT
Downstream 100 bases:
>100_bases TCGGGGAGACGAGAATGCGCAAGAAAAACAATCACGGCGGAGCGATAGTGGAATTCGCGCTCCTGTGTCCGTTCCTGGGT AGCCTGATTATCGGGACTAT
Product: TadE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MAESNNSKRRRRRGVELIEFTLVMMPLLGFIFLVIDLGWTIYKRATLQFAVREGCRYAVINQLQPLKDSNGNNYGMIDSV KYVVQQRAMGFLGSTPSDPGYATIQVRFYDPNSSLTTAVAMPPDCTSTIVPNKGGYLVEVSVEHYKSQILGAIYKGSTPL DFVARSSDRMEADPSSGIPKALTCP
Sequences:
>Translated_185_residues MAESNNSKRRRRRGVELIEFTLVMMPLLGFIFLVIDLGWTIYKRATLQFAVREGCRYAVINQLQPLKDSNGNNYGMIDSV KYVVQQRAMGFLGSTPSDPGYATIQVRFYDPNSSLTTAVAMPPDCTSTIVPNKGGYLVEVSVEHYKSQILGAIYKGSTPL DFVARSSDRMEADPSSGIPKALTCP >Mature_184_residues AESNNSKRRRRRGVELIEFTLVMMPLLGFIFLVIDLGWTIYKRATLQFAVREGCRYAVINQLQPLKDSNGNNYGMIDSVK YVVQQRAMGFLGSTPSDPGYATIQVRFYDPNSSLTTAVAMPPDCTSTIVPNKGGYLVEVSVEHYKSQILGAIYKGSTPLD FVARSSDRMEADPSSGIPKALTCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20469; Mature: 20338
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESNNSKRRRRRGVELIEFTLVMMPLLGFIFLVIDLGWTIYKRATLQFAVREGCRYAVI CCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEHH NQLQPLKDSNGNNYGMIDSVKYVVQQRAMGFLGSTPSDPGYATIQVRFYDPNSSLTTAVA HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEE MPPDCTSTIVPNKGGYLVEVSVEHYKSQILGAIYKGSTPLDFVARSSDRMEADPSSGIPK CCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCC ALTCP CCCCC >Mature Secondary Structure AESNNSKRRRRRGVELIEFTLVMMPLLGFIFLVIDLGWTIYKRATLQFAVREGCRYAVI CCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEHH NQLQPLKDSNGNNYGMIDSVKYVVQQRAMGFLGSTPSDPGYATIQVRFYDPNSSLTTAVA HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEE MPPDCTSTIVPNKGGYLVEVSVEHYKSQILGAIYKGSTPLDFVARSSDRMEADPSSGIPK CCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCC ALTCP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA