| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623630
Identifier: 116623630
GI number: 116623630
Start: 5743681
End: 5744208
Strand: Reverse
Name: 116623630
Synonym: Acid_4542
Alternate gene names: NA
Gene position: 5744208-5743681 (Counterclockwise)
Preceding gene: 116623631
Following gene: 116623629
Centisome position: 57.64
GC content: 56.06
Gene sequence:
>528_bases ATGCCACGAAAAGCAAACTCGAAACGGCGCAAGGGCGCGGAGTTATTGGAGTTTACGCTTGCCTTGTTGCCGCTCCTGAT GATGGTTTTCGTGATGCTTGATGCCGCCTGGGCTATCTTTGTGAAAAGCACCCTGGCTTTTGCGGTTCGCACCGGAGTCC GGCAAGGCATCACGATTACGAAAACGCAGGCCGGTAGTTCCGACCTCACCACCATGGTCAAGAATATCGTGCGGGCGAAC TCGCTCGGATTTCTTAGCGATACTTCCAAAATTAAAGTGAACTTCTACCATCCGCCGGATGACCCCACATCGACCGCGGC ACTCGTGGACGTTACCACGGATGCTACCGGCAATAACCCCTTGAACATTATGCAGGTCTCGATCCAGGGGTATACACTCG GGCCGCTGATCCCCCGGCTATTCGGTCTGAAGACTCCAATCGATAAGAGCGGAACAACCATCGCCGCGGTTTCCGCCGAC CTCATCGAGCCATCGCGCGATGTGCCTCCGAAGGGCAGCGCGCCATAG
Upstream 100 bases:
>100_bases CGTCCGTAGCATTGCCTTCATACCCATTGATAGGATGGTTTCGCGATGGGCTGCCTCGCATAATATTTTGAGTATTTAAG GTCTACTTATCTCAAATATT
Downstream 100 bases:
>100_bases AAGGAACCTGGGAAACGTGAAGGGACACTATGAAACGTAAAAGCAAAGGTGTTGCCATCGTCGAGTTCTCCTTCGCCATG CTGGTGGTGGTTCCATTGCT
Product: TadE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MPRKANSKRRKGAELLEFTLALLPLLMMVFVMLDAAWAIFVKSTLAFAVRTGVRQGITITKTQAGSSDLTTMVKNIVRAN SLGFLSDTSKIKVNFYHPPDDPTSTAALVDVTTDATGNNPLNIMQVSIQGYTLGPLIPRLFGLKTPIDKSGTTIAAVSAD LIEPSRDVPPKGSAP
Sequences:
>Translated_175_residues MPRKANSKRRKGAELLEFTLALLPLLMMVFVMLDAAWAIFVKSTLAFAVRTGVRQGITITKTQAGSSDLTTMVKNIVRAN SLGFLSDTSKIKVNFYHPPDDPTSTAALVDVTTDATGNNPLNIMQVSIQGYTLGPLIPRLFGLKTPIDKSGTTIAAVSAD LIEPSRDVPPKGSAP >Mature_174_residues PRKANSKRRKGAELLEFTLALLPLLMMVFVMLDAAWAIFVKSTLAFAVRTGVRQGITITKTQAGSSDLTTMVKNIVRANS LGFLSDTSKIKVNFYHPPDDPTSTAALVDVTTDATGNNPLNIMQVSIQGYTLGPLIPRLFGLKTPIDKSGTTIAAVSADL IEPSRDVPPKGSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18728; Mature: 18597
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKANSKRRKGAELLEFTLALLPLLMMVFVMLDAAWAIFVKSTLAFAVRTGVRQGITIT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE KTQAGSSDLTTMVKNIVRANSLGFLSDTSKIKVNFYHPPDDPTSTAALVDVTTDATGNNP ECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCC LNIMQVSIQGYTLGPLIPRLFGLKTPIDKSGTTIAAVSADLIEPSRDVPPKGSAP CEEEEEEECCEEHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCC >Mature Secondary Structure PRKANSKRRKGAELLEFTLALLPLLMMVFVMLDAAWAIFVKSTLAFAVRTGVRQGITIT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE KTQAGSSDLTTMVKNIVRANSLGFLSDTSKIKVNFYHPPDDPTSTAALVDVTTDATGNNP ECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCC LNIMQVSIQGYTLGPLIPRLFGLKTPIDKSGTTIAAVSADLIEPSRDVPPKGSAP CEEEEEEECCEEHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA