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The map label for this gene is yvrN [H]

Identifier: 116623619

GI number: 116623619

Start: 5727652

End: 5730027

Strand: Reverse

Name: yvrN [H]

Synonym: Acid_4529

Alternate gene names: 116623619

Gene position: 5730027-5727652 (Counterclockwise)

Preceding gene: 116623620

Following gene: 116623614

Centisome position: 57.5

GC content: 66.75

Gene sequence:

>2376_bases
ATGCTGCAGGACATGCTCCATTCGCTGCGGGCGCTGCGCAAACGCCCGGGGTTTGCCACCCTGGCGGTGCTGACCATCGC
GCTCGGCATCGGCGTGAACACCGCGATTTTCACGATCGTAAACTCGGTGCTGTGGAAGCCCTATCCCTACTCCGAATCGC
AGCGGCTGGTGCGCTTTCGCGAAGACTCCCCTTCAGGCTCGCTGAACTGTTCCGCGCCCAACTCCGCCGATTGGAAAGCG
CGCTCGCGCGTGCTGGACGATATCTCGCTCTACCGCTTCTTCCCGGCGCTGACACTGCGCTTTCCACAGCAGGACCAGCC
GGTGGTGGCGGCCTATGCGCATCCCAACCTGTTCGGGATTCTGCGTGTGCAGCCGGCGTTAGGGCGCATGTACAGCGAGG
CGGAGGATACGCCAGGAGCGGAACCGGTCGCGGTGATTACGAGCGTTGCCTGGGAGCGCTACTTCGGAAAAGATCCCGCG
ATTGTGGGCAAGACGGTGCGGGTGGCCAACGGCATGACGGATTCACTGCGCATCATCGGGGTGATGCCGCCGGGTTTCGA
ATACGACGCGGTGGAGTTCTGGCTTCCGCAGGCGCGCTATCCCATGGCGCCGGACAGGATGCGCGACAACCACTGGTTCG
CGGGACTCGCTCGTCTCGCGCGGGGGGTGACCATGGCGCGCGCGCGGAGCGAACTGACGGCGATTTCGATCGCACTCGAA
GCCGAGCACCCGGACACCAACAAGGGCGTGCGCGTGGCCATGCAAGCGCTGTCCGATTATTACGCGGGCCGCGCCAAGAC
GCCGCTGCTGCTGTTGTTTTGGGCGGTAGCGCTGGTGATGTTGATTGCATGCGGCAACGTTGTCCACCTTGTGTTGACGC
GGACCTTGTCGCGCGGCCGCGAAATGGCGGTTCGCCTGGCGATGGGTGCGAACGGCATCCGGCTGGTGAGGCTCTTACTC
TGCGAAGGACTGCTGCTCTCGCTGGCCGGCGGCGCTGTGGGTGTGCTCGGCGCGCAATGGATGGTGACGGCGGCGATCGC
GGCGCAGCCCGGATTGCTGCCCGAGATGAGAAAGGTCGAACTGGACCGCACCGCGATGCTCTACGCACTGGCTGCGACGC
TGTTCACGGCGCTGCTGCTGGCGGCGATTCCGGTGTGGCGCGTCTCGCGGCTCAGCGTGCTGGATGCGCTGCAGGCGGCA
GGGCGGGGAAGCGCGGACGTGCGGCGTCAGCGGCTGGGATGGCTGATGATCGCCGGAGAAGTCGCGATGGCGACGATGCT
GCTGGCCGGGGCGGGCCTGATGATTCAGGGGCTGCGAAATCTTGCGCGGGTCGATGTGGGTTATTCTCCGGACGGCCTGC
TCTCCCTGACGGTGGCGCCGCCGGCGGGAAAGAAGTACACGGATGCGGCATCGGACGCGCTGCTCGATCGCATACAGGAC
GCGGCGCGGAGCGTGCCGGGATACGTGTCATCGGCAATGGCGCAGCCATTCGGCGTAGGCGGCAACGGGATGCTGGGTCC
GGTGTTTTTCCCGGGTCGTGTGAACCCCTCGACTCCGCCCTTCGTGCCCGCGATGCAGGTGACGCCGGAGTTCTTCGACA
CGCTGCGGATACCCATGTTGAGGGGACGAACGATGGCGCGCGAACAGGGCAACACGCAGGAAATCGTCGTCAACCAGGAG
TTCGTTCGGCGATTTCTGCCCGATGAGAATCCGCTCGGCCGGCACCTCAAGATCTGGGGACCGGTGGTGATTGTCGGCGT
AGTCGGCAACTCGCGCCTGCAGGGCGATCTTACGGAGGTGCACCCCGAGATGTACCTGCCGGGCGTCAATGCGGGCTGGG
TGCCGACACTGCTGGTGCGCCTGCAATCCACGCCGGAGAATGCCGCCCCGGTGCTGCGCGAACGGCTGAAATCCGCCGAG
GCCGGGCTCCGCGTGAGCGCCGCCCGCACCCTGGCGAGTCGTGAGCAGGCCCGCACGGTGGTGGAGCGATTCACACGCGG
CCTGCTGCTGGTCTTCGCCCTGCTGGCTACCGTGCTCGCGTGCCTGGGGATCTACGGCGTGGCCTCGTACAGCGTGAGCC
AGCGGACGCGCGAGATCGGAATTCGGATGGCGCTCGGGGCCACGCGGGCCAACGTGGCGCGCCTGGTCTTCGGCCACACG
CTGGCGGCGACACTGGCCGGAGCGGTCTCGGGCCTGCTGGGAGCAGCGGCACTCTCGCGGTTGATCCGCAGCCAGCTTTA
CGGCGTCAGCGCCTGGGATCCCGAAATGCTCGCCGGTGTGTCAATCACGCTGCTCTTGGTCGCGCTCGCGGCCACCGTGG
CGCCCGTCCGCCGCGCGTCGAAAGTAGACCCCGCCATCTCCCTGCGTGCCGAGTGA

Upstream 100 bases:

>100_bases
TGGAAGAAGCTCGATGGCGACCCCACGGTGGAAGAGGTCCTGCGCAACTGGCCGGTGCGCCAGCCCATGCTCTGGGTCTA
ATATCTTGGGTGGAGGTTCC

Downstream 100 bases:

>100_bases
CTTTTATCAGAGCCGCGACTGTCAAGGAGCGGTCGCTAATCCGTCTTAGGATCTCCTTCACAGTCGCGGCTCGGTTAGTT
CTCCGTCGTATTCCAGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 791; Mature: 791

Protein sequence:

>791_residues
MLQDMLHSLRALRKRPGFATLAVLTIALGIGVNTAIFTIVNSVLWKPYPYSESQRLVRFREDSPSGSLNCSAPNSADWKA
RSRVLDDISLYRFFPALTLRFPQQDQPVVAAYAHPNLFGILRVQPALGRMYSEAEDTPGAEPVAVITSVAWERYFGKDPA
IVGKTVRVANGMTDSLRIIGVMPPGFEYDAVEFWLPQARYPMAPDRMRDNHWFAGLARLARGVTMARARSELTAISIALE
AEHPDTNKGVRVAMQALSDYYAGRAKTPLLLLFWAVALVMLIACGNVVHLVLTRTLSRGREMAVRLAMGANGIRLVRLLL
CEGLLLSLAGGAVGVLGAQWMVTAAIAAQPGLLPEMRKVELDRTAMLYALAATLFTALLLAAIPVWRVSRLSVLDALQAA
GRGSADVRRQRLGWLMIAGEVAMATMLLAGAGLMIQGLRNLARVDVGYSPDGLLSLTVAPPAGKKYTDAASDALLDRIQD
AARSVPGYVSSAMAQPFGVGGNGMLGPVFFPGRVNPSTPPFVPAMQVTPEFFDTLRIPMLRGRTMAREQGNTQEIVVNQE
FVRRFLPDENPLGRHLKIWGPVVIVGVVGNSRLQGDLTEVHPEMYLPGVNAGWVPTLLVRLQSTPENAAPVLRERLKSAE
AGLRVSAARTLASREQARTVVERFTRGLLLVFALLATVLACLGIYGVASYSVSQRTREIGIRMALGATRANVARLVFGHT
LAATLAGAVSGLLGAAALSRLIRSQLYGVSAWDPEMLAGVSITLLLVALAATVAPVRRASKVDPAISLRAE

Sequences:

>Translated_791_residues
MLQDMLHSLRALRKRPGFATLAVLTIALGIGVNTAIFTIVNSVLWKPYPYSESQRLVRFREDSPSGSLNCSAPNSADWKA
RSRVLDDISLYRFFPALTLRFPQQDQPVVAAYAHPNLFGILRVQPALGRMYSEAEDTPGAEPVAVITSVAWERYFGKDPA
IVGKTVRVANGMTDSLRIIGVMPPGFEYDAVEFWLPQARYPMAPDRMRDNHWFAGLARLARGVTMARARSELTAISIALE
AEHPDTNKGVRVAMQALSDYYAGRAKTPLLLLFWAVALVMLIACGNVVHLVLTRTLSRGREMAVRLAMGANGIRLVRLLL
CEGLLLSLAGGAVGVLGAQWMVTAAIAAQPGLLPEMRKVELDRTAMLYALAATLFTALLLAAIPVWRVSRLSVLDALQAA
GRGSADVRRQRLGWLMIAGEVAMATMLLAGAGLMIQGLRNLARVDVGYSPDGLLSLTVAPPAGKKYTDAASDALLDRIQD
AARSVPGYVSSAMAQPFGVGGNGMLGPVFFPGRVNPSTPPFVPAMQVTPEFFDTLRIPMLRGRTMAREQGNTQEIVVNQE
FVRRFLPDENPLGRHLKIWGPVVIVGVVGNSRLQGDLTEVHPEMYLPGVNAGWVPTLLVRLQSTPENAAPVLRERLKSAE
AGLRVSAARTLASREQARTVVERFTRGLLLVFALLATVLACLGIYGVASYSVSQRTREIGIRMALGATRANVARLVFGHT
LAATLAGAVSGLLGAAALSRLIRSQLYGVSAWDPEMLAGVSITLLLVALAATVAPVRRASKVDPAISLRAE
>Mature_791_residues
MLQDMLHSLRALRKRPGFATLAVLTIALGIGVNTAIFTIVNSVLWKPYPYSESQRLVRFREDSPSGSLNCSAPNSADWKA
RSRVLDDISLYRFFPALTLRFPQQDQPVVAAYAHPNLFGILRVQPALGRMYSEAEDTPGAEPVAVITSVAWERYFGKDPA
IVGKTVRVANGMTDSLRIIGVMPPGFEYDAVEFWLPQARYPMAPDRMRDNHWFAGLARLARGVTMARARSELTAISIALE
AEHPDTNKGVRVAMQALSDYYAGRAKTPLLLLFWAVALVMLIACGNVVHLVLTRTLSRGREMAVRLAMGANGIRLVRLLL
CEGLLLSLAGGAVGVLGAQWMVTAAIAAQPGLLPEMRKVELDRTAMLYALAATLFTALLLAAIPVWRVSRLSVLDALQAA
GRGSADVRRQRLGWLMIAGEVAMATMLLAGAGLMIQGLRNLARVDVGYSPDGLLSLTVAPPAGKKYTDAASDALLDRIQD
AARSVPGYVSSAMAQPFGVGGNGMLGPVFFPGRVNPSTPPFVPAMQVTPEFFDTLRIPMLRGRTMAREQGNTQEIVVNQE
FVRRFLPDENPLGRHLKIWGPVVIVGVVGNSRLQGDLTEVHPEMYLPGVNAGWVPTLLVRLQSTPENAAPVLRERLKSAE
AGLRVSAARTLASREQARTVVERFTRGLLLVFALLATVLACLGIYGVASYSVSQRTREIGIRMALGATRANVARLVFGHT
LAATLAGAVSGLLGAAALSRLIRSQLYGVSAWDPEMLAGVSITLLLVALAATVAPVRRASKVDPAISLRAE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 85323; Mature: 85323

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS00048 PROTAMINE_P1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQDMLHSLRALRKRPGFATLAVLTIALGIGVNTAIFTIVNSVLWKPYPYSESQRLVRFR
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEE
EDSPSGSLNCSAPNSADWKARSRVLDDISLYRFFPALTLRFPQQDQPVVAAYAHPNLFGI
CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCEEEE
LRVQPALGRMYSEAEDTPGAEPVAVITSVAWERYFGKDPAIVGKTVRVANGMTDSLRIIG
EEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHCCCCCCEEEEE
VMPPGFEYDAVEFWLPQARYPMAPDRMRDNHWFAGLARLARGVTMARARSELTAISIALE
ECCCCCCCCHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
AEHPDTNKGVRVAMQALSDYYAGRAKTPLLLLFWAVALVMLIACGNVVHLVLTRTLSRGR
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCH
EMAVRLAMGANGIRLVRLLLCEGLLLSLAGGAVGVLGAQWMVTAAIAAQPGLLPEMRKVE
HHEEHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LDRTAMLYALAATLFTALLLAAIPVWRVSRLSVLDALQAAGRGSADVRRQRLGWLMIAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEHH
VAMATMLLAGAGLMIQGLRNLARVDVGYSPDGLLSLTVAPPAGKKYTDAASDALLDRIQD
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
AARSVPGYVSSAMAQPFGVGGNGMLGPVFFPGRVNPSTPPFVPAMQVTPEFFDTLRIPML
HHHCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCHHHHHHHCCHHH
RGRTMAREQGNTQEIVVNQEFVRRFLPDENPLGRHLKIWGPVVIVGVVGNSRLQGDLTEV
CCCHHHHHCCCCCEEEECHHHHHHHCCCCCCCCCEEEEECCEEEEEEECCCCCCCCHHHH
HPEMYLPGVNAGWVPTLLVRLQSTPENAAPVLRERLKSAEAGLRVSAARTLASREQARTV
CHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VERFTRGLLLVFALLATVLACLGIYGVASYSVSQRTREIGIRMALGATRANVARLVFGHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHH
LAATLAGAVSGLLGAAALSRLIRSQLYGVSAWDPEMLAGVSITLLLVALAATVAPVRRAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVDPAISLRAE
CCCCCEEECCC
>Mature Secondary Structure
MLQDMLHSLRALRKRPGFATLAVLTIALGIGVNTAIFTIVNSVLWKPYPYSESQRLVRFR
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEE
EDSPSGSLNCSAPNSADWKARSRVLDDISLYRFFPALTLRFPQQDQPVVAAYAHPNLFGI
CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCEEEE
LRVQPALGRMYSEAEDTPGAEPVAVITSVAWERYFGKDPAIVGKTVRVANGMTDSLRIIG
EEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHCCCCCCEEEEE
VMPPGFEYDAVEFWLPQARYPMAPDRMRDNHWFAGLARLARGVTMARARSELTAISIALE
ECCCCCCCCHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
AEHPDTNKGVRVAMQALSDYYAGRAKTPLLLLFWAVALVMLIACGNVVHLVLTRTLSRGR
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCH
EMAVRLAMGANGIRLVRLLLCEGLLLSLAGGAVGVLGAQWMVTAAIAAQPGLLPEMRKVE
HHEEHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LDRTAMLYALAATLFTALLLAAIPVWRVSRLSVLDALQAAGRGSADVRRQRLGWLMIAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEHH
VAMATMLLAGAGLMIQGLRNLARVDVGYSPDGLLSLTVAPPAGKKYTDAASDALLDRIQD
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
AARSVPGYVSSAMAQPFGVGGNGMLGPVFFPGRVNPSTPPFVPAMQVTPEFFDTLRIPML
HHHCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCHHHHHHHCCHHH
RGRTMAREQGNTQEIVVNQEFVRRFLPDENPLGRHLKIWGPVVIVGVVGNSRLQGDLTEV
CCCHHHHHCCCCCEEEECHHHHHHHCCCCCCCCCEEEEECCEEEEEEECCCCCCCCHHHH
HPEMYLPGVNAGWVPTLLVRLQSTPENAAPVLRERLKSAEAGLRVSAARTLASREQARTV
CHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VERFTRGLLLVFALLATVLACLGIYGVASYSVSQRTREIGIRMALGATRANVARLVFGHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHH
LAATLAGAVSGLLGAAALSRLIRSQLYGVSAWDPEMLAGVSITLLLVALAATVAPVRRAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVDPAISLRAE
CCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751; 3145906 [H]