| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623607
Identifier: 116623607
GI number: 116623607
Start: 5715408
End: 5716832
Strand: Direct
Name: 116623607
Synonym: Acid_4517
Alternate gene names: NA
Gene position: 5715408-5716832 (Clockwise)
Preceding gene: 116623606
Following gene: 116623608
Centisome position: 57.35
GC content: 63.51
Gene sequence:
>1425_bases ATGGCTGCTAATTTTCTGAAATCGCGACAGACGAAGTACACCGCCTACGCGGGCACCTATATTCTGGTGATCCTGGCCGT GCTGGCGGCGGTCAACTTCCTGGCCAATCGCTACGACAAGAGCTACGATTCCACCAGCAACAAGCAGTTCAGCCTTTCCG ACCAGACCGAGAAGGTGGTGAAGGGGCTTAAGAACGACGTGAAGATCACGTACTTCGACGAGACCGCGAAGTTCCCGCAG GCGCGCGACGTGCTGGACCGCTACTCGGCGCTTTCGCCGAAGCTCCACATGGAGTTTATCGATCCGGTGAAGAAGCCGCA GCAGGCGAAATCCGCGGGATACCGCCGCGATCTGACGCTCCTGGTGGATAGCGGGGCGCGCAAGGAAGAGGCCAAGAGCC TCACCGAGGAAGAGATCACGGGCGCGATCATCCGGAGCCTGAAGAGCGGCGAGCGCACGGTCTGCTTCGTGAACGCGGCG AACGAACATTCGATCACGGACGAGGCGGCCACCGGCTTCTCGCTGATGAAGCAGCTGCTGGAGCGCGACAACTACAAGAC TCGCGAGATCAATTTCAAGTCGGCCGCGCCGGAGGCGGGCAAGCCGCTGGCCATCGGGCAGGCGCCGGCCGCCGCCGCCG TGGAGGTCCCGAAGGACTGCCTGGCGATGGTGGTGGGCGGACCGCAGCTGGATTATCCGCAGCCGATTGTGGACGCGATG CAGAAGTACGTGGAAGGCGGCGGGCATGCCCTCTTCATGCTGGATACCCCGCTGCGCATCGGCCGGGGCGACGCCACGGC GGAGAACGCCGCGCTGGTGAAGGTACTCTCCGATTGGGGCATCACGCCTGAGAAGAACCTGGTGCTGGATCTGAGCGGCA TCGGCAATATGTTCGGCGCGGGGCCGGAGATCCCGATCGTCCTGCAATACGAGGCGTCGCCGATTACGCGACCGATGGCG CGCGTGCCCACCGCATTCCCGGTGCCGCGCTCGCTCGACGTGAAGTCCGGCGCCAAGAGCACGGCGGAGAAACTGTTCGG CACGACCGAGGACAGCATCGCGGTGACGGAGGTCGCGGCCAATGGCGCGATCGACCCGAAGAAGGGCAAGAAAGGCCCGT TCACGCTCGGCGCTTCGGGAACTTATCAGGGGACGAACGGCCGGTTCGTGGTGGTGGGCACGTCGCAGTGGGCGGAGAAT CGCGCGATGGGTTCGCGCTCGCTCGGCAACCGCGACCTGTTCATGAACATGATCAACTGGCTGACCGCGGATGAGGACCT GATCAGCATCCGGCCGAAGACGACGGAAGATCGTCCGCTGACCATGACGACGCAGAAGCTGAACCTGGTGTTCTGGCTGA GCATCGTGATCTTCCCGCTGGCCGTGGTGGGCTTCGGCATGGCTACCTGGTGGAAGAGGAGATAG
Upstream 100 bases:
>100_bases GTGCTCGATACCAAGGACGTGGTGTTTTATCTTTCAATGATCTTCTTCGCCCTGTTTATTACCTCGCGGGCGATGGAGTC CCTGCGGTGGAGAAGCTAAC
Downstream 100 bases:
>100_bases GCGATGAAGCCGAAGGGACTTCTGATTGCGCTCGTTCTTTTGGCTGTTCTGGGCGGGTTGACGTGGTGGAGCAATAAGAG TCAGGCGGACAAGAGCAAGA
Product: ABC transporter-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MAANFLKSRQTKYTAYAGTYILVILAVLAAVNFLANRYDKSYDSTSNKQFSLSDQTEKVVKGLKNDVKITYFDETAKFPQ ARDVLDRYSALSPKLHMEFIDPVKKPQQAKSAGYRRDLTLLVDSGARKEEAKSLTEEEITGAIIRSLKSGERTVCFVNAA NEHSITDEAATGFSLMKQLLERDNYKTREINFKSAAPEAGKPLAIGQAPAAAAVEVPKDCLAMVVGGPQLDYPQPIVDAM QKYVEGGGHALFMLDTPLRIGRGDATAENAALVKVLSDWGITPEKNLVLDLSGIGNMFGAGPEIPIVLQYEASPITRPMA RVPTAFPVPRSLDVKSGAKSTAEKLFGTTEDSIAVTEVAANGAIDPKKGKKGPFTLGASGTYQGTNGRFVVVGTSQWAEN RAMGSRSLGNRDLFMNMINWLTADEDLISIRPKTTEDRPLTMTTQKLNLVFWLSIVIFPLAVVGFGMATWWKRR
Sequences:
>Translated_474_residues MAANFLKSRQTKYTAYAGTYILVILAVLAAVNFLANRYDKSYDSTSNKQFSLSDQTEKVVKGLKNDVKITYFDETAKFPQ ARDVLDRYSALSPKLHMEFIDPVKKPQQAKSAGYRRDLTLLVDSGARKEEAKSLTEEEITGAIIRSLKSGERTVCFVNAA NEHSITDEAATGFSLMKQLLERDNYKTREINFKSAAPEAGKPLAIGQAPAAAAVEVPKDCLAMVVGGPQLDYPQPIVDAM QKYVEGGGHALFMLDTPLRIGRGDATAENAALVKVLSDWGITPEKNLVLDLSGIGNMFGAGPEIPIVLQYEASPITRPMA RVPTAFPVPRSLDVKSGAKSTAEKLFGTTEDSIAVTEVAANGAIDPKKGKKGPFTLGASGTYQGTNGRFVVVGTSQWAEN RAMGSRSLGNRDLFMNMINWLTADEDLISIRPKTTEDRPLTMTTQKLNLVFWLSIVIFPLAVVGFGMATWWKRR >Mature_473_residues AANFLKSRQTKYTAYAGTYILVILAVLAAVNFLANRYDKSYDSTSNKQFSLSDQTEKVVKGLKNDVKITYFDETAKFPQA RDVLDRYSALSPKLHMEFIDPVKKPQQAKSAGYRRDLTLLVDSGARKEEAKSLTEEEITGAIIRSLKSGERTVCFVNAAN EHSITDEAATGFSLMKQLLERDNYKTREINFKSAAPEAGKPLAIGQAPAAAAVEVPKDCLAMVVGGPQLDYPQPIVDAMQ KYVEGGGHALFMLDTPLRIGRGDATAENAALVKVLSDWGITPEKNLVLDLSGIGNMFGAGPEIPIVLQYEASPITRPMAR VPTAFPVPRSLDVKSGAKSTAEKLFGTTEDSIAVTEVAANGAIDPKKGKKGPFTLGASGTYQGTNGRFVVVGTSQWAENR AMGSRSLGNRDLFMNMINWLTADEDLISIRPKTTEDRPLTMTTQKLNLVFWLSIVIFPLAVVGFGMATWWKRR
Specific function: Unknown
COG id: COG3225
COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51746; Mature: 51615
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANFLKSRQTKYTAYAGTYILVILAVLAAVNFLANRYDKSYDSTSNKQFSLSDQTEKVV CCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHH KGLKNDVKITYFDETAKFPQARDVLDRYSALSPKLHMEFIDPVKKPQQAKSAGYRRDLTL HHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCEEEE LVDSGARKEEAKSLTEEEITGAIIRSLKSGERTVCFVNAANEHSITDEAATGFSLMKQLL EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH ERDNYKTREINFKSAAPEAGKPLAIGQAPAAAAVEVPKDCLAMVVGGPQLDYPQPIVDAM HHCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHH QKYVEGGGHALFMLDTPLRIGRGDATAENAALVKVLSDWGITPEKNLVLDLSGIGNMFGA HHHHCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHCC GPEIPIVLQYEASPITRPMARVPTAFPVPRSLDVKSGAKSTAEKLFGTTEDSIAVTEVAA CCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECC NGAIDPKKGKKGPFTLGASGTYQGTNGRFVVVGTSQWAENRAMGSRSLGNRDLFMNMINW CCCCCCCCCCCCCEEECCCCEEECCCCEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHH LTADEDLISIRPKTTEDRPLTMTTQKLNLVFWLSIVIFPLAVVGFGMATWWKRR HCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AANFLKSRQTKYTAYAGTYILVILAVLAAVNFLANRYDKSYDSTSNKQFSLSDQTEKVV CCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHH KGLKNDVKITYFDETAKFPQARDVLDRYSALSPKLHMEFIDPVKKPQQAKSAGYRRDLTL HHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCEEEE LVDSGARKEEAKSLTEEEITGAIIRSLKSGERTVCFVNAANEHSITDEAATGFSLMKQLL EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH ERDNYKTREINFKSAAPEAGKPLAIGQAPAAAAVEVPKDCLAMVVGGPQLDYPQPIVDAM HHCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHH QKYVEGGGHALFMLDTPLRIGRGDATAENAALVKVLSDWGITPEKNLVLDLSGIGNMFGA HHHHCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHCC GPEIPIVLQYEASPITRPMARVPTAFPVPRSLDVKSGAKSTAEKLFGTTEDSIAVTEVAA CCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECC NGAIDPKKGKKGPFTLGASGTYQGTNGRFVVVGTSQWAENRAMGSRSLGNRDLFMNMINW CCCCCCCCCCCCCEEECCCCEEECCCCEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHH LTADEDLISIRPKTTEDRPLTMTTQKLNLVFWLSIVIFPLAVVGFGMATWWKRR HCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA