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The map label for this gene is 116623564

Identifier: 116623564

GI number: 116623564

Start: 5664655

End: 5665416

Strand: Reverse

Name: 116623564

Synonym: Acid_4474

Alternate gene names: NA

Gene position: 5665416-5664655 (Counterclockwise)

Preceding gene: 116623566

Following gene: 116623561

Centisome position: 56.85

GC content: 64.83

Gene sequence:

>762_bases
ATGTTCGAGACGGCTACACTTTCCTACGGTCCTTCCGGAAAACGGATGTGGACCACCGCGATGGGGTTCACCGGGCAGGC
GCTGCTGGTGGCGTGCGGGCTGCTGGCGCCGATGATTTCGCCGCAGGCGCTGCCGCGCGTCACCTGGCTGATTTCGGTGG
CGCCTCCCGGTCCGCCGCCACCACCGCCACGGCCGATGGATGAAGTGACGACGACGCGCAGCTCCGCAAGCGTCTCTCAG
ATTCGCGCCGGGAAACTTTTCGTACCGACAAAGATCCCGGCGATTGCTCAGATTCTGGTGGACCCGGAGCCTGTTTTGCC
CAGCGGACCTCCCGGTGTTCCTGGAGGATTGGGCACGGGCCGCGAAGGCACCGGAACGAGTAGCATCCTGACGTCGCTCA
TCGACTCGGCTGCGAGGTTTGTTCCTGTCGTTAAACCGCCCGAAGTCAAGCATGAGAACCCGCCGCCCACGCACGCCGCG
CCGCCGCGGATCACCACGCTGCGCATGGCGACGCCGATCCACCGGGTGGATCCGATCTATCCGGCGCTTGCCAAGCAGGC
GAGAGTCTCGGGCGTAGTCGAGTTGGTGGGGGTGCTCGGCGTGGATGGGCGCATTCACGAGCTGAAGGTGCTGCGCGGGC
ACCCGCTGCTGGTGAACGCCGCGATGGAGGCGGTGCGGCAGTGGGTCTACGAGCCGACGATGCTCAATGGACAGGCGGTG
GAAGTCTCCGCGCCGATTGTCGTGAACTTTATTTTGAAGTAG

Upstream 100 bases:

>100_bases
CAATGCCAGCAACCCGGCGCACCTGCGATTGAGACTCATTTCCCGAGATTTTCGACCAGAGGAGTAGTGTGTCTACGCAG
CGCGATGAAAGGAGAACATC

Downstream 100 bases:

>100_bases
TGACCGAGAGAAAGCCGCTGACGTTCTCCCAGAGAAGCTGCGGGAAGCTTTTGTCCAGGTACGAGCGGATGGAGACGTAG
CATTCGTCGCACTGATTGAC

Product: TonB family protein

Products: NA

Alternate protein names: NB-Like Protein

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MFETATLSYGPSGKRMWTTAMGFTGQALLVACGLLAPMISPQALPRVTWLISVAPPGPPPPPPRPMDEVTTTRSSASVSQ
IRAGKLFVPTKIPAIAQILVDPEPVLPSGPPGVPGGLGTGREGTGTSSILTSLIDSAARFVPVVKPPEVKHENPPPTHAA
PPRITTLRMATPIHRVDPIYPALAKQARVSGVVELVGVLGVDGRIHELKVLRGHPLLVNAAMEAVRQWVYEPTMLNGQAV
EVSAPIVVNFILK

Sequences:

>Translated_253_residues
MFETATLSYGPSGKRMWTTAMGFTGQALLVACGLLAPMISPQALPRVTWLISVAPPGPPPPPPRPMDEVTTTRSSASVSQ
IRAGKLFVPTKIPAIAQILVDPEPVLPSGPPGVPGGLGTGREGTGTSSILTSLIDSAARFVPVVKPPEVKHENPPPTHAA
PPRITTLRMATPIHRVDPIYPALAKQARVSGVVELVGVLGVDGRIHELKVLRGHPLLVNAAMEAVRQWVYEPTMLNGQAV
EVSAPIVVNFILK
>Mature_253_residues
MFETATLSYGPSGKRMWTTAMGFTGQALLVACGLLAPMISPQALPRVTWLISVAPPGPPPPPPRPMDEVTTTRSSASVSQ
IRAGKLFVPTKIPAIAQILVDPEPVLPSGPPGVPGGLGTGREGTGTSSILTSLIDSAARFVPVVKPPEVKHENPPPTHAA
PPRITTLRMATPIHRVDPIYPALAKQARVSGVVELVGVLGVDGRIHELKVLRGHPLLVNAAMEAVRQWVYEPTMLNGQAV
EVSAPIVVNFILK

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26695; Mature: 26695

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFETATLSYGPSGKRMWTTAMGFTGQALLVACGLLAPMISPQALPRVTWLISVAPPGPPP
CCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHCCEEEEEEEECCCCCCC
PPPRPMDEVTTTRSSASVSQIRAGKLFVPTKIPAIAQILVDPEPVLPSGPPGVPGGLGTG
CCCCCHHHHHHCCCCHHHHHHCCCCEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
REGTGTSSILTSLIDSAARFVPVVKPPEVKHENPPPTHAAPPRITTLRMATPIHRVDPIY
CCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCHH
PALAKQARVSGVVELVGVLGVDGRIHELKVLRGHPLLVNAAMEAVRQWVYEPTMLNGQAV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHHHCCCCEECCEEE
EVSAPIVVNFILK
EECCCEEEEEECC
>Mature Secondary Structure
MFETATLSYGPSGKRMWTTAMGFTGQALLVACGLLAPMISPQALPRVTWLISVAPPGPPP
CCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHCCEEEEEEEECCCCCCC
PPPRPMDEVTTTRSSASVSQIRAGKLFVPTKIPAIAQILVDPEPVLPSGPPGVPGGLGTG
CCCCCHHHHHHCCCCHHHHHHCCCCEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
REGTGTSSILTSLIDSAARFVPVVKPPEVKHENPPPTHAAPPRITTLRMATPIHRVDPIY
CCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCHH
PALAKQARVSGVVELVGVLGVDGRIHELKVLRGHPLLVNAAMEAVRQWVYEPTMLNGQAV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHHHCCCCEECCEEE
EVSAPIVVNFILK
EECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA