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The map label for this gene is yjhC [C]

Identifier: 116623544

GI number: 116623544

Start: 5641011

End: 5642267

Strand: Direct

Name: yjhC [C]

Synonym: Acid_4454

Alternate gene names: 116623544

Gene position: 5641011-5642267 (Clockwise)

Preceding gene: 116623543

Following gene: 116623546

Centisome position: 56.6

GC content: 63.88

Gene sequence:

>1257_bases
ATGAATCGAAGACACTTTGCGTTGGGAGCGTTATCGGCGCTGAGCGCCAGCCGCGTGATCGGCGCGAATGAGCGCGTACG
CATGGGCCTGGTCGGCAGCGGCGGACGCGGCCGCGAGGACTGGGGCACATTCCTGAAGCAGCCGGATTGCGAACCGGTGG
CCGTGTGCGATGTGTACGCGCCGTTCCTCGCCAAGGGAATCGAGATGACGGAGGGCCGCGCCAAGCCCGTTCAGGATTTC
CGGCGGCTGCTGGAGCAGAAAGATATCGACGCGGTGATCGTGGCGACCCCCGACCACTGGCACGCGCTCATGACGGTGGC
CGCGTGCGAGGCGGGCAAGGATGTCTATTGCGAAAAGCCGCTCTCGCTGACCGTGACCGATGGTCGCAAGATGCTCAACG
CGGCGCGTAAGAATAGCCGTGTGGTCCAAACCGGCAGCCAGCAGCGCTCTGGTTCGCACTACGCCGCCGCCGTGAAGCTG
ATTCAGGATGGCGGCATCGGCGAAGTGCATCGCATCCATTGCGGATTCCAGCGCAATATCTTTCCCGGCCTCAAGCCCAC
CGAGATGGCCAACGGGAACACCGGCGGATTCGACTACGAGATGTGGCTGGGTCCAGCCCCCAAGCGGCCATTCGATCCGT
TCCGCTGCATCTACAATTTCCGCTGGTTCTGGGACTACTCGGGCGGGCAGATGACCAACTGGGGAGCGCACCATCTGGAT
ATCGCGCGCTGGATCGTGGGAGCCGAGGCGGCAAGCACGGTCGCGGGCTTCGGCGGCCGGTACGCGCTCACGGATGGCGG
CGAAACGCCGGACGTGCAGCAGGTGACTTATCAGTTCCCGAAAGTAGTAGTGACGTGGACCGTGAGCGAGATCGCCGAAG
GCGCCAAGGGCGTGACGCTCGACGTGTATGGCACGAAGGGCTCAATGACGCTGCTGCGCAGTGGCTTCCAGGTGACGCCG
GAGAAGGTGGGATCGGGCAAGGAGAAGACGCCCGCCATGGAAGCGCTCTCTATGAAGGGCAACGATCTGAATGCGGCCCA
CGCGCGCAACTTCCTGGATTGCGTGAAGAGCCGGCAGCACCCGAATGCGGATGTGGAAGAAGGCCACCGGTCCGCGACCA
TGTGTCACCTCGGCAATATCTCGACGCGGCTGGGTCGCAGTCTGAAATGGGACCCCGCCAAAGAGCAGGTGGTAGGCGAC
GCAGAGGCCAACGCGATGCTCTCCCGCCCATACCGCGCACCCTGGAAGTTGGCGTAG

Upstream 100 bases:

>100_bases
AACGCCGGTTGGGAGAAGAAATTCCCGGGAATTTTCGTGGTCAAGGACGGCTGGATGCGAACCGATGGGTTGGATCGGCC
GGGATTGGGGACAAGCTGAC

Downstream 100 bases:

>100_bases
TGGCGCTGGCGCTTTCGCCGGTCTTTTTTCTTCTTCGCGTTACTCTGCGGCTCTGCGAGAAAAGGGAGTTTGCCGGCCGA
GCCGAACCCTTACCCCCAGG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNRRHFALGALSALSASRVIGANERVRMGLVGSGGRGREDWGTFLKQPDCEPVAVCDVYAPFLAKGIEMTEGRAKPVQDF
RRLLEQKDIDAVIVATPDHWHALMTVAACEAGKDVYCEKPLSLTVTDGRKMLNAARKNSRVVQTGSQQRSGSHYAAAVKL
IQDGGIGEVHRIHCGFQRNIFPGLKPTEMANGNTGGFDYEMWLGPAPKRPFDPFRCIYNFRWFWDYSGGQMTNWGAHHLD
IARWIVGAEAASTVAGFGGRYALTDGGETPDVQQVTYQFPKVVVTWTVSEIAEGAKGVTLDVYGTKGSMTLLRSGFQVTP
EKVGSGKEKTPAMEALSMKGNDLNAAHARNFLDCVKSRQHPNADVEEGHRSATMCHLGNISTRLGRSLKWDPAKEQVVGD
AEANAMLSRPYRAPWKLA

Sequences:

>Translated_418_residues
MNRRHFALGALSALSASRVIGANERVRMGLVGSGGRGREDWGTFLKQPDCEPVAVCDVYAPFLAKGIEMTEGRAKPVQDF
RRLLEQKDIDAVIVATPDHWHALMTVAACEAGKDVYCEKPLSLTVTDGRKMLNAARKNSRVVQTGSQQRSGSHYAAAVKL
IQDGGIGEVHRIHCGFQRNIFPGLKPTEMANGNTGGFDYEMWLGPAPKRPFDPFRCIYNFRWFWDYSGGQMTNWGAHHLD
IARWIVGAEAASTVAGFGGRYALTDGGETPDVQQVTYQFPKVVVTWTVSEIAEGAKGVTLDVYGTKGSMTLLRSGFQVTP
EKVGSGKEKTPAMEALSMKGNDLNAAHARNFLDCVKSRQHPNADVEEGHRSATMCHLGNISTRLGRSLKWDPAKEQVVGD
AEANAMLSRPYRAPWKLA
>Mature_418_residues
MNRRHFALGALSALSASRVIGANERVRMGLVGSGGRGREDWGTFLKQPDCEPVAVCDVYAPFLAKGIEMTEGRAKPVQDF
RRLLEQKDIDAVIVATPDHWHALMTVAACEAGKDVYCEKPLSLTVTDGRKMLNAARKNSRVVQTGSQQRSGSHYAAAVKL
IQDGGIGEVHRIHCGFQRNIFPGLKPTEMANGNTGGFDYEMWLGPAPKRPFDPFRCIYNFRWFWDYSGGQMTNWGAHHLD
IARWIVGAEAASTVAGFGGRYALTDGGETPDVQQVTYQFPKVVVTWTVSEIAEGAKGVTLDVYGTKGSMTLLRSGFQVTP
EKVGSGKEKTPAMEALSMKGNDLNAAHARNFLDCVKSRQHPNADVEEGHRSATMCHLGNISTRLGRSLKWDPAKEQVVGD
AEANAMLSRPYRAPWKLA

Specific function: Glycosidase [H]

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family. Glycosyl hydrolase 109 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45798; Mature: 45798

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRHFALGALSALSASRVIGANERVRMGLVGSGGRGREDWGTFLKQPDCEPVAVCDVYA
CCCCEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEHHHHH
PFLAKGIEMTEGRAKPVQDFRRLLEQKDIDAVIVATPDHWHALMTVAACEAGKDVYCEKP
HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCC
LSLTVTDGRKMLNAARKNSRVVQTGSQQRSGSHYAAAVKLIQDGGIGEVHRIHCGFQRNI
CEEEECCCHHHHHHHHHCCEEEECCCCCCCCCHHEEEEEEHHCCCCCCEEEEECCCCCCC
FPGLKPTEMANGNTGGFDYEMWLGPAPKRPFDPFRCIYNFRWFWDYSGGQMTNWGAHHLD
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHEEEEEEEEECCCCCCCCCCCHHHH
IARWIVGAEAASTVAGFGGRYALTDGGETPDVQQVTYQFPKVVVTWTVSEIAEGAKGVTL
HHHHHHCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCEEEEEEEHHHHHCCCCCCEE
DVYGTKGSMTLLRSGFQVTPEKVGSGKEKTPAMEALSMKGNDLNAAHARNFLDCVKSRQH
EEECCCCCHHHHHCCCEECHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PNADVEEGHRSATMCHLGNISTRLGRSLKWDPAKEQVVGDAEANAMLSRPYRAPWKLA
CCCCHHHCCCCEEEEECCCCHHHHCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNRRHFALGALSALSASRVIGANERVRMGLVGSGGRGREDWGTFLKQPDCEPVAVCDVYA
CCCCEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEHHHHH
PFLAKGIEMTEGRAKPVQDFRRLLEQKDIDAVIVATPDHWHALMTVAACEAGKDVYCEKP
HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCC
LSLTVTDGRKMLNAARKNSRVVQTGSQQRSGSHYAAAVKLIQDGGIGEVHRIHCGFQRNI
CEEEECCCHHHHHHHHHCCEEEECCCCCCCCCHHEEEEEEHHCCCCCCEEEEECCCCCCC
FPGLKPTEMANGNTGGFDYEMWLGPAPKRPFDPFRCIYNFRWFWDYSGGQMTNWGAHHLD
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHEEEEEEEEECCCCCCCCCCCHHHH
IARWIVGAEAASTVAGFGGRYALTDGGETPDVQQVTYQFPKVVVTWTVSEIAEGAKGVTL
HHHHHHCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCEEEEEEEHHHHHCCCCCCEE
DVYGTKGSMTLLRSGFQVTPEKVGSGKEKTPAMEALSMKGNDLNAAHARNFLDCVKSRQH
EEECCCCCHHHHHCCCEECHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PNADVEEGHRSATMCHLGNISTRLGRSLKWDPAKEQVVGDAEANAMLSRPYRAPWKLA
CCCCHHHCCCCEEEEECCCCHHHHCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA