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The map label for this gene is ycjL [C]

Identifier: 116623537

GI number: 116623537

Start: 5629497

End: 5630135

Strand: Reverse

Name: ycjL [C]

Synonym: Acid_4447

Alternate gene names: 116623537

Gene position: 5630135-5629497 (Counterclockwise)

Preceding gene: 116623538

Following gene: 116623533

Centisome position: 56.5

GC content: 60.41

Gene sequence:

>639_bases
ATGATCAGAGTCGCACTGCCTTTTGGGAGCACGCCGGAAAGCAAACGCAGCCCCTACCGCCAGGCACTCGCTCTCGCGGG
CATTCAACCTGTCGAGAACGCCACAACGCTCACAGGGCTCGATGGCCTGGTGCTCGCGGGCGGAAGTGATATCGATCCCG
CGATCTACGGCGCCGAATGCGACCCGCTGACGGGCAAGGTGGACTGTGATCGCGACCGCGTTGAGTTGGCTCTCGTGCGC
GAGGCGTTGGATCGCGACCTACCCGTCTTAGCGATTTGTCGCGGGATGCAACTGCTGAATGTTGCACTGGGGGGCACGCT
GAAGCAGCACATCGAAGGACACCGTTCCCCGGGGCAGCGCGACGCCCATTCGGTAGCGATCGAAGCCAATAGTGAGCTGA
GATCAATTCTGGGCATGGATGAATTCGTCGTGAACTCGCGCCACCATCAATGCTTGGGGCGCGTGGCGAGCGGGCTGGTG
GTTGTCGCGACAGCAGTGGATAACGTGATAGAGGCCGTTGAATTACCGGAAAAGCGCTTCGTGATCGGCGTGCAATGGCA
TCCCGAGGATCGTGTTGATGGGGAGGACGGTAAGCTCTTTGCGGCCTTCCGCCACGCGATCAAACGCTCTTCACATTAG

Upstream 100 bases:

>100_bases
ACCGGCCTGCTCGGTCCATCCAGCGGCAATTCGACGACGCTGCTCCCCGAGCCCGCCGACAGTGGGACAGAGAAGCCGCC
GAGCCGTTGATTGGCAGGTC

Downstream 100 bases:

>100_bases
TACTGTCACCGCGAGACTGAATGCGAATTACCAATCGCTTGCTGACGGTCTGTAAAAATTCGAAACGGGCAAGCTAAAAG
CATGCCCCACCACTGAACTG

Product: peptidase C26

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MIRVALPFGSTPESKRSPYRQALALAGIQPVENATTLTGLDGLVLAGGSDIDPAIYGAECDPLTGKVDCDRDRVELALVR
EALDRDLPVLAICRGMQLLNVALGGTLKQHIEGHRSPGQRDAHSVAIEANSELRSILGMDEFVVNSRHHQCLGRVASGLV
VVATAVDNVIEAVELPEKRFVIGVQWHPEDRVDGEDGKLFAAFRHAIKRSSH

Sequences:

>Translated_212_residues
MIRVALPFGSTPESKRSPYRQALALAGIQPVENATTLTGLDGLVLAGGSDIDPAIYGAECDPLTGKVDCDRDRVELALVR
EALDRDLPVLAICRGMQLLNVALGGTLKQHIEGHRSPGQRDAHSVAIEANSELRSILGMDEFVVNSRHHQCLGRVASGLV
VVATAVDNVIEAVELPEKRFVIGVQWHPEDRVDGEDGKLFAAFRHAIKRSSH
>Mature_212_residues
MIRVALPFGSTPESKRSPYRQALALAGIQPVENATTLTGLDGLVLAGGSDIDPAIYGAECDPLTGKVDCDRDRVELALVR
EALDRDLPVLAICRGMQLLNVALGGTLKQHIEGHRSPGQRDAHSVAIEANSELRSILGMDEFVVNSRHHQCLGRVASGLV
VVATAVDNVIEAVELPEKRFVIGVQWHPEDRVDGEDGKLFAAFRHAIKRSSH

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=183, Percent_Identity=35.5191256830601, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 22896; Mature: 22896

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVALPFGSTPESKRSPYRQALALAGIQPVENATTLTGLDGLVLAGGSDIDPAIYGAEC
CEEEEECCCCCCCHHCCHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCCCEECCCC
DPLTGKVDCDRDRVELALVREALDRDLPVLAICRGMQLLNVALGGTLKQHIEGHRSPGQR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCC
DAHSVAIEANSELRSILGMDEFVVNSRHHQCLGRVASGLVVVATAVDNVIEAVELPEKRF
CCCEEEEECCHHHHHHHCHHHHHHCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCE
VIGVQWHPEDRVDGEDGKLFAAFRHAIKRSSH
EEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIRVALPFGSTPESKRSPYRQALALAGIQPVENATTLTGLDGLVLAGGSDIDPAIYGAEC
CEEEEECCCCCCCHHCCHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCCCEECCCC
DPLTGKVDCDRDRVELALVREALDRDLPVLAICRGMQLLNVALGGTLKQHIEGHRSPGQR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCC
DAHSVAIEANSELRSILGMDEFVVNSRHHQCLGRVASGLVVVATAVDNVIEAVELPEKRF
CCCEEEEECCHHHHHHHCHHHHHHCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCE
VIGVQWHPEDRVDGEDGKLFAAFRHAIKRSSH
EEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]