| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623523
Identifier: 116623523
GI number: 116623523
Start: 5610879
End: 5611307
Strand: Reverse
Name: 116623523
Synonym: Acid_4433
Alternate gene names: NA
Gene position: 5611307-5610879 (Counterclockwise)
Preceding gene: 116623524
Following gene: 116623522
Centisome position: 56.31
GC content: 59.44
Gene sequence:
>429_bases GTGGCCGTAGCGGCGGTATTGACGCACGGGATGGTCTCTTCCGCCATGAATTTCCATGAGCCTTTGCCGGTCTCCACGTA TCAGGGGTTCTTCCAATACCTGCTGCTGGCAACGGAGCGGCTGTGGAGTTACGCCCACGGATGGCAACCCATGAGCCACA TTCGCGACTTCGGACATTTTTACGCTCCGGTGGTTCACCTGATTTGCCCCCTGATCGGGTTCGCGCTCTTCTGGACCATG TCGCGGCACCCGGCGGGCATCAAATTCTGGAAGCCGCTGGTGATTTCCTTGCTATTCACCATCCCGCCTTGCGTTAGTGA CCCGTGGTTCGAGGCGGCACGGACAATCCTCGTCACAATTTTGATGGTGTGGAGTGTGCGGCATACCCTGCCAGACCCCG CTCGCGTGCCCGCTGCTGCAACGAGGTAG
Upstream 100 bases:
>100_bases GGCCTCTTCGAAGAGCCCGCTAACCGGCGCCTAAGAAGACTGGTTAAAGATTCCGCCACAGCGAGCCGATAAGAGCATAA TGCGACCGATTGGAGCGAGT
Downstream 100 bases:
>100_bases GCCGCCCTGGAACTTGTAGGCCTCTGGTGACCGGGTGCGGGTGGGCGACAATGGAAGGAAACTCATGCGCACTCTTTACG GGTATCTGCGGGACTACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MAVAAVLTHGMVSSAMNFHEPLPVSTYQGFFQYLLLATERLWSYAHGWQPMSHIRDFGHFYAPVVHLICPLIGFALFWTM SRHPAGIKFWKPLVISLLFTIPPCVSDPWFEAARTILVTILMVWSVRHTLPDPARVPAAATR
Sequences:
>Translated_142_residues MAVAAVLTHGMVSSAMNFHEPLPVSTYQGFFQYLLLATERLWSYAHGWQPMSHIRDFGHFYAPVVHLICPLIGFALFWTM SRHPAGIKFWKPLVISLLFTIPPCVSDPWFEAARTILVTILMVWSVRHTLPDPARVPAAATR >Mature_141_residues AVAAVLTHGMVSSAMNFHEPLPVSTYQGFFQYLLLATERLWSYAHGWQPMSHIRDFGHFYAPVVHLICPLIGFALFWTMS RHPAGIKFWKPLVISLLFTIPPCVSDPWFEAARTILVTILMVWSVRHTLPDPARVPAAATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16088; Mature: 15957
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAAVLTHGMVSSAMNFHEPLPVSTYQGFFQYLLLATERLWSYAHGWQPMSHIRDFGHF CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH YAPVVHLICPLIGFALFWTMSRHPAGIKFWKPLVISLLFTIPPCVSDPWFEAARTILVTI HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LMVWSVRHTLPDPARVPAAATR HHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AVAAVLTHGMVSSAMNFHEPLPVSTYQGFFQYLLLATERLWSYAHGWQPMSHIRDFGHF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH YAPVVHLICPLIGFALFWTMSRHPAGIKFWKPLVISLLFTIPPCVSDPWFEAARTILVTI HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LMVWSVRHTLPDPARVPAAATR HHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA