| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623490
Identifier: 116623490
GI number: 116623490
Start: 5568586
End: 5570694
Strand: Direct
Name: 116623490
Synonym: Acid_4400
Alternate gene names: NA
Gene position: 5568586-5570694 (Clockwise)
Preceding gene: 116623489
Following gene: 116623491
Centisome position: 55.88
GC content: 57.85
Gene sequence:
>2109_bases ATGCAAGCGAAATTGGCTGTTCTGACGGGCATATTCTGCCTGGCATACGTTGCTGAAATCCTGCCGGGACAAGAGAAGGA AGACCGGACGTTGTTATCACAGCAACAGATGACCGCCATTATTAATGAAGTCTCGGGCGAGCGCGCTTTGCATCACGTGC TGGAATTGGTCCCGTATCAGTTCGTCCGGCCGCCGGCCGAATATCAAGGCCACTTCCGCGAGTCGGAGGTCATGGCGAAG CTTGCCAGGGAATATGGCTTCAGCAATGTTGCGATCGAAGATTATCCCACCGGACAGACCTATCAGCCAATCGTTGGCGA ATTATGGACGACCGCGCCAAAGAGCGTGAAGCTTTACGACATTCACGACATACCGGAATCGCTTGCCTCAACGAATGCAA ACGGGGATATCAGCGGTGAACTGGTCAACGTGGGACAAGGTGCGGCCCAGGATTTCGAAGGCAAGGACATCAAAGGCAAG TTCGTATTGTCGCTCGCGCCAAGTGGTCTTACCGGCATTTATGGACGGGCGGTTGCGGCCGGGGCAATCGGTATCGTCGG GATCAGCGCGATCGGCGCAGGCGACCGTTCAACGGACTACCCGGAGCAAATCGTGTCAACAACCGTGAACGCCCAGCCGA ACACCGCGGCGTGGGCCGTATCCCCGAGAGTGGCGCGCGAACTCGAAACGATGCTCAATCGCGGACAGAAGGTCTCGATT CGATCCATCACCAAGAGCCAACAGGTGCCGAACAAGCAGGAAATCGTGCATGCCGAGATTCCGGGCGATGGCAGCACTAC GCAGGAAGTAGCCATCGGCGGCCACCTGTTCGAGGGGTACATCAAGCAAGGCGCCAACGACGATAATTCCGGTTGCGCTT TGACCCTTGAGATCGGCCGCGCCTATCTCAAGCTCATCGCAGAGGGAAAGCTGCCGCGTCCCAAACGGACCATCAACTTT CAATGGGTCCAGGAGATCAGCGGCACCAACGCCTGGTTTAATGCCCACCCGGACAAGCAGAAGGTGATCATTGGCGATCT GAACTTCGATATGGAGGGACTTCGCCTTACCCAGAGCCGCAGCTATTGGGTGCTCCATCGCACTCCGGATACCTTCCCCT CATATATCAACGACATTGCCCAGAGCATGATGGAATACGTCGCCGAGATTTCTCGGGAACGTGTCCGATACCGCCGGGAT GGCTATGGCGCAACGCAGCCGGTCGAATCGCCCAATGGAAGCAGAGATGCTTTTTATATCAAGATCGACAAGCACTATGG CTCGAGTGACCATGTGACTTACATGCAGCATGGCATTCCCGCGGTCATCTTTAATACCTGGCCGGACATGTGGTATCACT CCTCGCAAGATACGCCGGACAAGCAGGATCCCACCCAGTACAAACGTGCGGCGGCTGTCGGGACGGGAGTATTGGCCGCT CTTGCATCGGGTACGGAGGAGATGGCTGCGCGGATTCTGAGCGAAAACCTCGGCCGCGGCCTGGAGAGGATGGGCGAGTC GCACACCAAAGGGCTAGGCTATATGGCCGACGCAGCGAACGCGACTGCATTAACGGATGGTTACAGAGAAGCGAGAATCG CCATTCTCCATCAAACGGAAGTCGAGAAGGGCGTCGTGGGATCCGCGAGCATTTTGTGGACGAACGTCGACAGCGGTAAG CGGAAGACAGCTTCCTTTGCGCCCCTGATCGACCAGCGCGCCGCATTGCTGTTGAACGAGGTGAAGGCGGCGTATCAACT CCAGGCGCTACAGCGTGGCGTACCACCTTCCGAACCTGTCTTGACAACAGAGGAACGCGAAGCTGCCAATCTGATGGTTG AATCCTTGGGCGGTGGCGGGCGCGGTGGTGCTGGTGGCGACGGGCGCGGCGGTGGCGGCGCACGCGGTGGCGGTAATGCC GGTCCCGCGCTTCCACAGGAAATGAATGCTGAATTTGCGATCCTGCTCGGCCGACATATGACCGCTTTGGAGATTCGCGA CTTCTTATCCGGCGAGTTCACCCCCCTGCCGCTCGCCGATTTGATGGCGGTGCTGCGCGCGAGAGAAACTGCCGGCAGCA TCAAGCTGGTCCCCAAGACGGGTAAATAG
Upstream 100 bases:
>100_bases GTAGGATTCGCCGGCACGCACTTCGCCGCGACCGGCGCGCCAGCAAATTGCGGAGGCCGTTCCGAATGGGTTAGGATTGA CGCTCCGAGAGGTGAGGGGC
Downstream 100 bases:
>100_bases GAAGCCCCTGTTTCACTAAATTCGCGGCCGAAGAAATGGATTGGCTCTGAATTCCCGTGCTCAACGATAAAACTCGGCGG CGATTCGCTCGCCGCAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
>702_residues MQAKLAVLTGIFCLAYVAEILPGQEKEDRTLLSQQQMTAIINEVSGERALHHVLELVPYQFVRPPAEYQGHFRESEVMAK LAREYGFSNVAIEDYPTGQTYQPIVGELWTTAPKSVKLYDIHDIPESLASTNANGDISGELVNVGQGAAQDFEGKDIKGK FVLSLAPSGLTGIYGRAVAAGAIGIVGISAIGAGDRSTDYPEQIVSTTVNAQPNTAAWAVSPRVARELETMLNRGQKVSI RSITKSQQVPNKQEIVHAEIPGDGSTTQEVAIGGHLFEGYIKQGANDDNSGCALTLEIGRAYLKLIAEGKLPRPKRTINF QWVQEISGTNAWFNAHPDKQKVIIGDLNFDMEGLRLTQSRSYWVLHRTPDTFPSYINDIAQSMMEYVAEISRERVRYRRD GYGATQPVESPNGSRDAFYIKIDKHYGSSDHVTYMQHGIPAVIFNTWPDMWYHSSQDTPDKQDPTQYKRAAAVGTGVLAA LASGTEEMAARILSENLGRGLERMGESHTKGLGYMADAANATALTDGYREARIAILHQTEVEKGVVGSASILWTNVDSGK RKTASFAPLIDQRAALLLNEVKAAYQLQALQRGVPPSEPVLTTEEREAANLMVESLGGGGRGGAGGDGRGGGGARGGGNA GPALPQEMNAEFAILLGRHMTALEIRDFLSGEFTPLPLADLMAVLRARETAGSIKLVPKTGK
Sequences:
>Translated_702_residues MQAKLAVLTGIFCLAYVAEILPGQEKEDRTLLSQQQMTAIINEVSGERALHHVLELVPYQFVRPPAEYQGHFRESEVMAK LAREYGFSNVAIEDYPTGQTYQPIVGELWTTAPKSVKLYDIHDIPESLASTNANGDISGELVNVGQGAAQDFEGKDIKGK FVLSLAPSGLTGIYGRAVAAGAIGIVGISAIGAGDRSTDYPEQIVSTTVNAQPNTAAWAVSPRVARELETMLNRGQKVSI RSITKSQQVPNKQEIVHAEIPGDGSTTQEVAIGGHLFEGYIKQGANDDNSGCALTLEIGRAYLKLIAEGKLPRPKRTINF QWVQEISGTNAWFNAHPDKQKVIIGDLNFDMEGLRLTQSRSYWVLHRTPDTFPSYINDIAQSMMEYVAEISRERVRYRRD GYGATQPVESPNGSRDAFYIKIDKHYGSSDHVTYMQHGIPAVIFNTWPDMWYHSSQDTPDKQDPTQYKRAAAVGTGVLAA LASGTEEMAARILSENLGRGLERMGESHTKGLGYMADAANATALTDGYREARIAILHQTEVEKGVVGSASILWTNVDSGK RKTASFAPLIDQRAALLLNEVKAAYQLQALQRGVPPSEPVLTTEEREAANLMVESLGGGGRGGAGGDGRGGGGARGGGNA GPALPQEMNAEFAILLGRHMTALEIRDFLSGEFTPLPLADLMAVLRARETAGSIKLVPKTGK >Mature_702_residues MQAKLAVLTGIFCLAYVAEILPGQEKEDRTLLSQQQMTAIINEVSGERALHHVLELVPYQFVRPPAEYQGHFRESEVMAK LAREYGFSNVAIEDYPTGQTYQPIVGELWTTAPKSVKLYDIHDIPESLASTNANGDISGELVNVGQGAAQDFEGKDIKGK FVLSLAPSGLTGIYGRAVAAGAIGIVGISAIGAGDRSTDYPEQIVSTTVNAQPNTAAWAVSPRVARELETMLNRGQKVSI RSITKSQQVPNKQEIVHAEIPGDGSTTQEVAIGGHLFEGYIKQGANDDNSGCALTLEIGRAYLKLIAEGKLPRPKRTINF QWVQEISGTNAWFNAHPDKQKVIIGDLNFDMEGLRLTQSRSYWVLHRTPDTFPSYINDIAQSMMEYVAEISRERVRYRRD GYGATQPVESPNGSRDAFYIKIDKHYGSSDHVTYMQHGIPAVIFNTWPDMWYHSSQDTPDKQDPTQYKRAAAVGTGVLAA LASGTEEMAARILSENLGRGLERMGESHTKGLGYMADAANATALTDGYREARIAILHQTEVEKGVVGSASILWTNVDSGK RKTASFAPLIDQRAALLLNEVKAAYQLQALQRGVPPSEPVLTTEEREAANLMVESLGGGGRGGAGGDGRGGGGARGGGNA GPALPQEMNAEFAILLGRHMTALEIRDFLSGEFTPLPLADLMAVLRARETAGSIKLVPKTGK
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75952; Mature: 75952
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAKLAVLTGIFCLAYVAEILPGQEKEDRTLLSQQQMTAIINEVSGERALHHVLELVPYQ CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHH FVRPPAEYQGHFRESEVMAKLAREYGFSNVAIEDYPTGQTYQPIVGELWTTAPKSVKLYD HCCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCEEEEE IHDIPESLASTNANGDISGELVNVGQGAAQDFEGKDIKGKFVLSLAPSGLTGIYGRAVAA CHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH GAIGIVGISAIGAGDRSTDYPEQIVSTTVNAQPNTAAWAVSPRVARELETMLNRGQKVSI HHHHHHEEHEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEH RSITKSQQVPNKQEIVHAEIPGDGSTTQEVAIGGHLFEGYIKQGANDDNSGCALTLEIGR HHHHHHHCCCCHHHEEEEECCCCCCCCHHEECCHHHHHHHHHCCCCCCCCCCEEEEHHHH AYLKLIAEGKLPRPKRTINFQWVQEISGTNAWFNAHPDKQKVIIGDLNFDMEGLRLTQSR HHHHHHHCCCCCCCCCEECHHHHHHCCCCCCEECCCCCCCEEEEEECCCCCCCEEEECCC SYWVLHRTPDTFPSYINDIAQSMMEYVAEISRERVRYRRDGYGATQPVESPNGSRDAFYI CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE KIDKHYGSSDHVTYMQHGIPAVIFNTWPDMWYHSSQDTPDKQDPTQYKRAAAVGTGVLAA EEECCCCCCCCEEHHHCCCCEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LASGTEEMAARILSENLGRGLERMGESHTKGLGYMADAANATALTDGYREARIAILHQTE HHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEECCCCCCCHHHCCHHHHEEEEEEHHH VEKGVVGSASILWTNVDSGKRKTASFAPLIDQRAALLLNEVKAAYQLQALQRGVPPSEPV HHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LTTEEREAANLMVESLGGGGRGGAGGDGRGGGGARGGGNAGPALPQEMNAEFAILLGRHM ECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEECCCH TALEIRDFLSGEFTPLPLADLMAVLRARETAGSIKLVPKTGK HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC >Mature Secondary Structure MQAKLAVLTGIFCLAYVAEILPGQEKEDRTLLSQQQMTAIINEVSGERALHHVLELVPYQ CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHH FVRPPAEYQGHFRESEVMAKLAREYGFSNVAIEDYPTGQTYQPIVGELWTTAPKSVKLYD HCCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCEEEEE IHDIPESLASTNANGDISGELVNVGQGAAQDFEGKDIKGKFVLSLAPSGLTGIYGRAVAA CHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH GAIGIVGISAIGAGDRSTDYPEQIVSTTVNAQPNTAAWAVSPRVARELETMLNRGQKVSI HHHHHHEEHEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEH RSITKSQQVPNKQEIVHAEIPGDGSTTQEVAIGGHLFEGYIKQGANDDNSGCALTLEIGR HHHHHHHCCCCHHHEEEEECCCCCCCCHHEECCHHHHHHHHHCCCCCCCCCCEEEEHHHH AYLKLIAEGKLPRPKRTINFQWVQEISGTNAWFNAHPDKQKVIIGDLNFDMEGLRLTQSR HHHHHHHCCCCCCCCCEECHHHHHHCCCCCCEECCCCCCCEEEEEECCCCCCCEEEECCC SYWVLHRTPDTFPSYINDIAQSMMEYVAEISRERVRYRRDGYGATQPVESPNGSRDAFYI CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE KIDKHYGSSDHVTYMQHGIPAVIFNTWPDMWYHSSQDTPDKQDPTQYKRAAAVGTGVLAA EEECCCCCCCCEEHHHCCCCEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LASGTEEMAARILSENLGRGLERMGESHTKGLGYMADAANATALTDGYREARIAILHQTE HHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEECCCCCCCHHHCCHHHHEEEEEEHHH VEKGVVGSASILWTNVDSGKRKTASFAPLIDQRAALLLNEVKAAYQLQALQRGVPPSEPV HHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LTTEEREAANLMVESLGGGGRGGAGGDGRGGGGARGGGNAGPALPQEMNAEFAILLGRHM ECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEECCCH TALEIRDFLSGEFTPLPLADLMAVLRARETAGSIKLVPKTGK HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA