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The map label for this gene is 116623486

Identifier: 116623486

GI number: 116623486

Start: 5563901

End: 5565991

Strand: Reverse

Name: 116623486

Synonym: Acid_4396

Alternate gene names: NA

Gene position: 5565991-5563901 (Counterclockwise)

Preceding gene: 116623487

Following gene: 116623483

Centisome position: 55.85

GC content: 62.27

Gene sequence:

>2091_bases
ATGAACCGTTCGCGCTCCACGCTGGCGCTCTTTTTTATGCTCCCACTCTTCTCCCCGGCCGCTGCGCCGGATTGGTTTCC
CCGCTCCGACATGATGTCCATCGGCGTCTACTACTACCCCGAGGCCTGGCCCGAATCCCAATGGGCCCGGGACATGGCGA
ACATGCGCAAGATGGGCATGGAGTTCGTCCACTTGGGCGAGTTCGCCTGGTCCTTCATGGAGCCCGAGGAAGGCCATTTC
GAGCTCGATTGGCTTGAGAAAAACGTCGCCCTCGCCGCGCAGAATCATCTCAAGGTCATCCTCTGCACCCCGAGCGCTAC
CCCGCCCATCTGGCTTACCCGCAAATACCCCGAGATCCTCATGGTCGATGCCGCCGGTCGCCGCATGAATCACGGCGGAC
GTCAGCAGGCCGATTGGAGCGCTCCCGTTTACCGCGATTACGTTGCCAAAATCGATGCGGAGCTCGCCAAACGGTTCGGC
CGCGATCCGCGCGTCTGGGGCTGGCAGATCGATAACGAGCTCAGCCACTACGAAAAGGAGTTCTCTTACTCACCCGCCGC
CACCGCCAGGTTTCGCGCCTGGCTGCGCGAAAAGTACGGCACCATCGCCCGCCTCAACGCCGATTGGGGCACCGCCTTCT
GGTCCATGGTCTACCAGAATTTCGACCAGATCGAAATCCCCAATCAACTCGACCACCCCGGTCTTCCCAATCCACACGCG
CAGCTCGATTTCAATCGCTGGTTCGCCGCCGAGGCCGCCGACTACCTCCGCTTCCAAGCCGCTACCCTTCGCCAGAATGG
CGTAGCCGCGCAGTGGATCACCACCAACTACATGGCGATGTACCCTAACGTCGATCCCACGCTCTCCGCCAAAGACCTCG
ACGCCTTCACCTGGACCCACTACCCTGTGCACGGCGACGTCTTCCCCGAAAATGGACCGCTCGGTTTCCGGCTCGGCAGC
GGCGCCGTGCAAAGTTTCATGCACGATTTTATGCGCCCCATCAATGGCCTCTCCGGCCTCATGGAACTGCAGCCCGGCCA
GGTCAACTGGGGCGCCATCAATCCCTGGCCCCAGCCCGGCGCCATCCATATGTGGATCATGCGCGCCTTCGCCGCGGGAG
CCCGCATCGTCTGCACGTACCGCTACCGCCAGCCGTTATTCGGCAATGAGCAGTATCACAAGGGCCTCGTCGAAACGGAT
GGAGTCACTCCGTCGCCCGGCGGCCGCGAATACTCCCGGGCGATGGCCGACATACTCAAGCTCCGCCCGAGTTATCGCCC
GGATGCCAAAGAGCCAGCCGCTTATGCCAAGCGCCGCACCGCCTTCCTCATCAACTTCGATAACCGCTGGGATATCGAGA
ACCACAAGCAGACGACCCGCTGGGACACCCACGCCCACTGGCTGAAGTACTACCGCGCGCTGAAATCCATGATGGCGCCC
GTCGACGTCGTCACCGAAGATCGCGATCTTGCCGCTTACCCCTTCGTTGTTGCGCCCGCCTACCAGCTCGTTGACCAAGC
CTTGATCGCAAAATGGACCGCTTACGCCGGGAACGGCGGCCACCTCATCCTCACGGCCCGTACCGGCCAGAAAGACCGCC
GCGGCCACTTTCCCGAGACCCTCTGGGCCGAACAGATCTACCGATTAATCGGCGCGCGTCTCCCCATCTATGACCTGCTG
CCCGGTAACCTAGAAGGCACGGTCACGGCCGAGGGAGTCCGCTATTCCTGGGGCTCCTGGGCCGACATCCTCGAGCCCGA
ACCCGGCACTACCTCGCTCGCCACTTACTCCGACCAGTTCTATGCCGGTAGATCGGCAGCGGTAACTCACAAACTAGGCA
AGGGATCCGTGACTTACATCGGTGTGGATACTGAAAAAGGCGACCTGGAAATGGCGCTGTTGCGCAAGATCTACGCGGCG
ACTGCCCCCGCCACCCTGAAACCCGATTTCCTGGTCGATTGGCGCGATGGCTTCTGGGTCGCCACCAACTTTACCTCACT
CCCCCAGGTAATCCCCGCGGCTGCCACGGCGCACCTCCTGCTGGGCGCCCGCACCGTCGCACCGGGAGGTGTTACCGTCT
GGCAGGAGTAA

Upstream 100 bases:

>100_bases
AAACGCCTCAGGAGTTGAATCGATCCGGCTTCGCAGCTGCGCAGAAAGAAGATCTGAGGGCGGCCGTCGACCGCTGTTTC
CGATGTGACACAATCAGGCC

Downstream 100 bases:

>100_bases
ATCGGATCAGCAACAGCGCGAATGCGACCAAGCCGAGCGTCGCCGGTTCCGGCGCCGCGGTGGCTGCCGTTACCGAGGCT
GTCGCGCGCAGCGCTCCATC

Product: beta-galactosidase

Products: NA

Alternate protein names: Beta-gal; Lactase [H]

Number of amino acids: Translated: 696; Mature: 696

Protein sequence:

>696_residues
MNRSRSTLALFFMLPLFSPAAAPDWFPRSDMMSIGVYYYPEAWPESQWARDMANMRKMGMEFVHLGEFAWSFMEPEEGHF
ELDWLEKNVALAAQNHLKVILCTPSATPPIWLTRKYPEILMVDAAGRRMNHGGRQQADWSAPVYRDYVAKIDAELAKRFG
RDPRVWGWQIDNELSHYEKEFSYSPAATARFRAWLREKYGTIARLNADWGTAFWSMVYQNFDQIEIPNQLDHPGLPNPHA
QLDFNRWFAAEAADYLRFQAATLRQNGVAAQWITTNYMAMYPNVDPTLSAKDLDAFTWTHYPVHGDVFPENGPLGFRLGS
GAVQSFMHDFMRPINGLSGLMELQPGQVNWGAINPWPQPGAIHMWIMRAFAAGARIVCTYRYRQPLFGNEQYHKGLVETD
GVTPSPGGREYSRAMADILKLRPSYRPDAKEPAAYAKRRTAFLINFDNRWDIENHKQTTRWDTHAHWLKYYRALKSMMAP
VDVVTEDRDLAAYPFVVAPAYQLVDQALIAKWTAYAGNGGHLILTARTGQKDRRGHFPETLWAEQIYRLIGARLPIYDLL
PGNLEGTVTAEGVRYSWGSWADILEPEPGTTSLATYSDQFYAGRSAAVTHKLGKGSVTYIGVDTEKGDLEMALLRKIYAA
TAPATLKPDFLVDWRDGFWVATNFTSLPQVIPAAATAHLLLGARTVAPGGVTVWQE

Sequences:

>Translated_696_residues
MNRSRSTLALFFMLPLFSPAAAPDWFPRSDMMSIGVYYYPEAWPESQWARDMANMRKMGMEFVHLGEFAWSFMEPEEGHF
ELDWLEKNVALAAQNHLKVILCTPSATPPIWLTRKYPEILMVDAAGRRMNHGGRQQADWSAPVYRDYVAKIDAELAKRFG
RDPRVWGWQIDNELSHYEKEFSYSPAATARFRAWLREKYGTIARLNADWGTAFWSMVYQNFDQIEIPNQLDHPGLPNPHA
QLDFNRWFAAEAADYLRFQAATLRQNGVAAQWITTNYMAMYPNVDPTLSAKDLDAFTWTHYPVHGDVFPENGPLGFRLGS
GAVQSFMHDFMRPINGLSGLMELQPGQVNWGAINPWPQPGAIHMWIMRAFAAGARIVCTYRYRQPLFGNEQYHKGLVETD
GVTPSPGGREYSRAMADILKLRPSYRPDAKEPAAYAKRRTAFLINFDNRWDIENHKQTTRWDTHAHWLKYYRALKSMMAP
VDVVTEDRDLAAYPFVVAPAYQLVDQALIAKWTAYAGNGGHLILTARTGQKDRRGHFPETLWAEQIYRLIGARLPIYDLL
PGNLEGTVTAEGVRYSWGSWADILEPEPGTTSLATYSDQFYAGRSAAVTHKLGKGSVTYIGVDTEKGDLEMALLRKIYAA
TAPATLKPDFLVDWRDGFWVATNFTSLPQVIPAAATAHLLLGARTVAPGGVTVWQE
>Mature_696_residues
MNRSRSTLALFFMLPLFSPAAAPDWFPRSDMMSIGVYYYPEAWPESQWARDMANMRKMGMEFVHLGEFAWSFMEPEEGHF
ELDWLEKNVALAAQNHLKVILCTPSATPPIWLTRKYPEILMVDAAGRRMNHGGRQQADWSAPVYRDYVAKIDAELAKRFG
RDPRVWGWQIDNELSHYEKEFSYSPAATARFRAWLREKYGTIARLNADWGTAFWSMVYQNFDQIEIPNQLDHPGLPNPHA
QLDFNRWFAAEAADYLRFQAATLRQNGVAAQWITTNYMAMYPNVDPTLSAKDLDAFTWTHYPVHGDVFPENGPLGFRLGS
GAVQSFMHDFMRPINGLSGLMELQPGQVNWGAINPWPQPGAIHMWIMRAFAAGARIVCTYRYRQPLFGNEQYHKGLVETD
GVTPSPGGREYSRAMADILKLRPSYRPDAKEPAAYAKRRTAFLINFDNRWDIENHKQTTRWDTHAHWLKYYRALKSMMAP
VDVVTEDRDLAAYPFVVAPAYQLVDQALIAKWTAYAGNGGHLILTARTGQKDRRGHFPETLWAEQIYRLIGARLPIYDLL
PGNLEGTVTAEGVRYSWGSWADILEPEPGTTSLATYSDQFYAGRSAAVTHKLGKGSVTYIGVDTEKGDLEMALLRKIYAA
TAPATLKPDFLVDWRDGFWVATNFTSLPQVIPAAATAHLLLGARTVAPGGVTVWQE

Specific function: Unknown

COG id: COG1874

COG function: function code G; Beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013739
- InterPro:   IPR013738
- InterPro:   IPR013780
- InterPro:   IPR003476
- InterPro:   IPR013529
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02449 Glyco_hydro_42; PF08533 Glyco_hydro_42C; PF08532 Glyco_hydro_42M [H]

EC number: =3.2.1.23 [H]

Molecular weight: Translated: 78942; Mature: 78942

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSRSTLALFFMLPLFSPAAAPDWFPRSDMMSIGVYYYPEAWPESQWARDMANMRKMGM
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCH
EFVHLGEFAWSFMEPEEGHFELDWLEKNVALAAQNHLKVILCTPSATPPIWLTRKYPEIL
HHHHHHHHHHHHCCCCCCCEEEEEHHCCCEEEECCCEEEEEECCCCCCCEEEEECCCCEE
MVDAAGRRMNHGGRQQADWSAPVYRDYVAKIDAELAKRFGRDPRVWGWQIDNELSHYEKE
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
FSYSPAATARFRAWLREKYGTIARLNADWGTAFWSMVYQNFDQIEIPNQLDHPGLPNPHA
CCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCC
QLDFNRWFAAEAADYLRFQAATLRQNGVAAQWITTNYMAMYPNVDPTLSAKDLDAFTWTH
EECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEEECCCCCCCCCCCCCCCEEEEE
YPVHGDVFPENGPLGFRLGSGAVQSFMHDFMRPINGLSGLMELQPGQVNWGAINPWPQPG
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AIHMWIMRAFAAGARIVCTYRYRQPLFGNEQYHKGLVETDGVTPSPGGREYSRAMADILK
HHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
LRPSYRPDAKEPAAYAKRRTAFLINFDNRWDIENHKQTTRWDTHAHWLKYYRALKSMMAP
HCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
VDVVTEDRDLAAYPFVVAPAYQLVDQALIAKWTAYAGNGGHLILTARTGQKDRRGHFPET
CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCHH
LWAEQIYRLIGARLPIYDLLPGNLEGTVTAEGVRYSWGSWADILEPEPGTTSLATYSDQF
HHHHHHHHHHCCCCCCHHCCCCCCCCEEEECCEEECCCCCHHCCCCCCCCCEEEECCCHH
YAGRSAAVTHKLGKGSVTYIGVDTEKGDLEMALLRKIYAATAPATLKPDFLVDWRDGFWV
HCCCCHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEE
ATNFTSLPQVIPAAATAHLLLGARTVAPGGVTVWQE
EECCCHHHHHHHHHHHHHHHHCCEEECCCCEEECCC
>Mature Secondary Structure
MNRSRSTLALFFMLPLFSPAAAPDWFPRSDMMSIGVYYYPEAWPESQWARDMANMRKMGM
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCH
EFVHLGEFAWSFMEPEEGHFELDWLEKNVALAAQNHLKVILCTPSATPPIWLTRKYPEIL
HHHHHHHHHHHHCCCCCCCEEEEEHHCCCEEEECCCEEEEEECCCCCCCEEEEECCCCEE
MVDAAGRRMNHGGRQQADWSAPVYRDYVAKIDAELAKRFGRDPRVWGWQIDNELSHYEKE
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
FSYSPAATARFRAWLREKYGTIARLNADWGTAFWSMVYQNFDQIEIPNQLDHPGLPNPHA
CCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCC
QLDFNRWFAAEAADYLRFQAATLRQNGVAAQWITTNYMAMYPNVDPTLSAKDLDAFTWTH
EECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEEECCCCCCCCCCCCCCCEEEEE
YPVHGDVFPENGPLGFRLGSGAVQSFMHDFMRPINGLSGLMELQPGQVNWGAINPWPQPG
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AIHMWIMRAFAAGARIVCTYRYRQPLFGNEQYHKGLVETDGVTPSPGGREYSRAMADILK
HHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
LRPSYRPDAKEPAAYAKRRTAFLINFDNRWDIENHKQTTRWDTHAHWLKYYRALKSMMAP
HCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
VDVVTEDRDLAAYPFVVAPAYQLVDQALIAKWTAYAGNGGHLILTARTGQKDRRGHFPET
CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCHH
LWAEQIYRLIGARLPIYDLLPGNLEGTVTAEGVRYSWGSWADILEPEPGTTSLATYSDQF
HHHHHHHHHHCCCCCCHHCCCCCCCCEEEECCEEECCCCCHHCCCCCCCCCEEEECCCHH
YAGRSAAVTHKLGKGSVTYIGVDTEKGDLEMALLRKIYAATAPATLKPDFLVDWRDGFWV
HCCCCHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEE
ATNFTSLPQVIPAAATAHLLLGARTVAPGGVTVWQE
EECCCHHHHHHHHHHHHHHHHCCEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9757561; 12215416 [H]