| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623465
Identifier: 116623465
GI number: 116623465
Start: 5537394
End: 5538215
Strand: Reverse
Name: 116623465
Synonym: Acid_4375
Alternate gene names: NA
Gene position: 5538215-5537394 (Counterclockwise)
Preceding gene: 116623468
Following gene: 116623461
Centisome position: 55.57
GC content: 58.27
Gene sequence:
>822_bases ATGCGGTCAACACTTTCGTTTGTTGTCGCGGCATTGATCGGGGCGCTCCAGGCAAGCGCGCAGGAGAACGCGGCTCCCGA TCCGTTGAAGTTTGAAGTGGCTTCCATTAAGGTCGCCAACTCGGGGTCCAACGGTGTGCGAGGAGGTTGTCGGGGAGTCG ATTCTGTGTACACCGCTGAGGAACAGGCGCGCGGCGGAGTCCCATCTTTGGGCCGCTGTGTAATCACCGACGCGCGATTG AGCCACCTTATCGGAATCGCTTACGGTGTCAGCATGCAGGTGCTCGACACCGGTCCGGATTGGATACAACGCGGAGACCT GCGGTTTGACGTCCAGGCCAAGGCGGAGAATCCTGCCTCGACCACCAGGCAGCAGCTCCTCACCATGCTGCAGAACCTTC TGGTGGAGCGCTTCCAGATAAAATTCCACAATGTCATTAAGGAAGAACCTGGGTTCGCGCTGATGGTCGCGAAGAATGGT CCGAAGTTGCAGCCATCCGCGAGCGAGGAAGAGAAGCTGACGTTTGTCGGCCCCAACGGTGAAGAACTGCCCAAGCCGAT GGGCCATGCGATCAAAGTGAATGCCCGGAAGTTTTCCGTGTCCGCGCTCAAGGATCTGATAGCATTCGCCGGCAACCTGG GTCCGGGAGTCGATAGGACTGGCCTCACGGGTTTATATGATTTCACGCTCTCATGGAATGAGGAGGAGGGCCCCAGTCTC GCCTCGGCCCTGCGGGATCAACTGGGTTTGCAGCTGAGATCAGAGAAGTTGCCGGTCGCCCGGTTTGTTCTGGATTCCGC CCAAAAGCCCACTCCCAATTAG
Upstream 100 bases:
>100_bases GCGCCCGGCGAAGGATTCAGGAGTTCTGACAATTGGACTGCATTGCCGCTTCGCACGGCGTGGGATACGCTGATGGGTAC GCGAGGAGGGTGTGATAAGA
Downstream 100 bases:
>100_bases ACTACTTCCGCGAGATGGAGCCGCGATCCGTTGACGTTCGCGGCTCCCGTCCGTGTGGACAGACCGGGGAGGCCTGCCCT ACTTCTTCTTGCCCTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRSTLSFVVAALIGALQASAQENAAPDPLKFEVASIKVANSGSNGVRGGCRGVDSVYTAEEQARGGVPSLGRCVITDARL SHLIGIAYGVSMQVLDTGPDWIQRGDLRFDVQAKAENPASTTRQQLLTMLQNLLVERFQIKFHNVIKEEPGFALMVAKNG PKLQPSASEEEKLTFVGPNGEELPKPMGHAIKVNARKFSVSALKDLIAFAGNLGPGVDRTGLTGLYDFTLSWNEEEGPSL ASALRDQLGLQLRSEKLPVARFVLDSAQKPTPN
Sequences:
>Translated_273_residues MRSTLSFVVAALIGALQASAQENAAPDPLKFEVASIKVANSGSNGVRGGCRGVDSVYTAEEQARGGVPSLGRCVITDARL SHLIGIAYGVSMQVLDTGPDWIQRGDLRFDVQAKAENPASTTRQQLLTMLQNLLVERFQIKFHNVIKEEPGFALMVAKNG PKLQPSASEEEKLTFVGPNGEELPKPMGHAIKVNARKFSVSALKDLIAFAGNLGPGVDRTGLTGLYDFTLSWNEEEGPSL ASALRDQLGLQLRSEKLPVARFVLDSAQKPTPN >Mature_273_residues MRSTLSFVVAALIGALQASAQENAAPDPLKFEVASIKVANSGSNGVRGGCRGVDSVYTAEEQARGGVPSLGRCVITDARL SHLIGIAYGVSMQVLDTGPDWIQRGDLRFDVQAKAENPASTTRQQLLTMLQNLLVERFQIKFHNVIKEEPGFALMVAKNG PKLQPSASEEEKLTFVGPNGEELPKPMGHAIKVNARKFSVSALKDLIAFAGNLGPGVDRTGLTGLYDFTLSWNEEEGPSL ASALRDQLGLQLRSEKLPVARFVLDSAQKPTPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29296; Mature: 29296
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTLSFVVAALIGALQASAQENAAPDPLKFEVASIKVANSGSNGVRGGCRGVDSVYTAE CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHH EQARGGVPSLGRCVITDARLSHLIGIAYGVSMQVLDTGPDWIQRGDLRFDVQAKAENPAS HHHCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEEECCHHHHHCCCEEEEEEECCCCCHH TTRQQLLTMLQNLLVERFQIKFHNVIKEEPGFALMVAKNGPKLQPSASEEEKLTFVGPNG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCC EELPKPMGHAIKVNARKFSVSALKDLIAFAGNLGPGVDRTGLTGLYDFTLSWNEEEGPSL HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCHHH ASALRDQLGLQLRSEKLPVARFVLDSAQKPTPN HHHHHHHHCCEECCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MRSTLSFVVAALIGALQASAQENAAPDPLKFEVASIKVANSGSNGVRGGCRGVDSVYTAE CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHH EQARGGVPSLGRCVITDARLSHLIGIAYGVSMQVLDTGPDWIQRGDLRFDVQAKAENPAS HHHCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEEECCHHHHHCCCEEEEEEECCCCCHH TTRQQLLTMLQNLLVERFQIKFHNVIKEEPGFALMVAKNGPKLQPSASEEEKLTFVGPNG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCC EELPKPMGHAIKVNARKFSVSALKDLIAFAGNLGPGVDRTGLTGLYDFTLSWNEEEGPSL HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCHHH ASALRDQLGLQLRSEKLPVARFVLDSAQKPTPN HHHHHHHHCCEECCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA