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The map label for this gene is 116623453

Identifier: 116623453

GI number: 116623453

Start: 5527129

End: 5527752

Strand: Direct

Name: 116623453

Synonym: Acid_4362

Alternate gene names: NA

Gene position: 5527129-5527752 (Clockwise)

Preceding gene: 116623452

Following gene: 116623454

Centisome position: 55.46

GC content: 63.14

Gene sequence:

>624_bases
ATGCCCGAAAAGAAGAAAAGTGTTGCTGACAATTCGAAGAACACTGACAGGCGCATGACAAAACCTCAGGCACCCCGGAT
TCCCCCGAATCACGAGCCGGCCCACAAATCGCCGGCCCCCATTACGCCTTCCCTCGCAGCGAGGCAGCTCGCCGCGTTCG
AAGCTGCCATGAAACACTTTCATGCGCGTAAGTTCAAGGAAGCGCGCGACCTGTTTCAGGAAGCGGCCGACGGCCCGGAA
CGCGACGTGGCCCAGCGTTCCCGGCTGCACACCACCATGTGCGATCGCCGCCTGCAGCAGGCGCCTCCGCTCGACCTCGG
CTCCGCCGAGGAGCACTATAACTACGGCGTCGCCATGATCAACGTGCGCAACATCGGGGAAGCGCGCGCGCACCTTGAAA
AGGCGATACAGCTGACCCCCGGCGCCGAGCACATCCATTACGCCCTGGCGCTGGCGCAAGGGCTCTCGGGCGATTTCGCC
GGCGCCCAGGAGAACCTCCGTATCGCCATTGAGCTGGAACCGCGCAACCGCATGATCGCGCGGCAGGACGCCGATTTCGC
CCCCCTGGCCCATCAGTCCAACATCCACTCCCTCCTGTACCCGGAAAAGAAATCGTCGTGGTAG

Upstream 100 bases:

>100_bases
TGAGGAATCCGCAAAGTTCATGCGCGAGGCGGGACTGGGATGACGCGCCCGGTTGCATCCCGAGGGTGCGGTCTGATATA
ACCATCAAGCGCTGTATACC

Downstream 100 bases:

>100_bases
CATCGCTCGTCCAATTTGACGGCCGCTGATCCTTCCATGGAAGATCACTCGCCCCTCAAAGTCGTCGCCGTCGGCGGCGG
CACCGGAATGAGCAGCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MPEKKKSVADNSKNTDRRMTKPQAPRIPPNHEPAHKSPAPITPSLAARQLAAFEAAMKHFHARKFKEARDLFQEAADGPE
RDVAQRSRLHTTMCDRRLQQAPPLDLGSAEEHYNYGVAMINVRNIGEARAHLEKAIQLTPGAEHIHYALALAQGLSGDFA
GAQENLRIAIELEPRNRMIARQDADFAPLAHQSNIHSLLYPEKKSSW

Sequences:

>Translated_207_residues
MPEKKKSVADNSKNTDRRMTKPQAPRIPPNHEPAHKSPAPITPSLAARQLAAFEAAMKHFHARKFKEARDLFQEAADGPE
RDVAQRSRLHTTMCDRRLQQAPPLDLGSAEEHYNYGVAMINVRNIGEARAHLEKAIQLTPGAEHIHYALALAQGLSGDFA
GAQENLRIAIELEPRNRMIARQDADFAPLAHQSNIHSLLYPEKKSSW
>Mature_206_residues
PEKKKSVADNSKNTDRRMTKPQAPRIPPNHEPAHKSPAPITPSLAARQLAAFEAAMKHFHARKFKEARDLFQEAADGPER
DVAQRSRLHTTMCDRRLQQAPPLDLGSAEEHYNYGVAMINVRNIGEARAHLEKAIQLTPGAEHIHYALALAQGLSGDFAG
AQENLRIAIELEPRNRMIARQDADFAPLAHQSNIHSLLYPEKKSSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23157; Mature: 23026

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKKKSVADNSKNTDRRMTKPQAPRIPPNHEPAHKSPAPITPSLAARQLAAFEAAMKHF
CCCHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HARKFKEARDLFQEAADGPERDVAQRSRLHTTMCDRRLQQAPPLDLGSAEEHYNYGVAMI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEE
NVRNIGEARAHLEKAIQLTPGAEHIHYALALAQGLSGDFAGAQENLRIAIELEPRNRMIA
EECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHH
RQDADFAPLAHQSNIHSLLYPEKKSSW
HCCCCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
PEKKKSVADNSKNTDRRMTKPQAPRIPPNHEPAHKSPAPITPSLAARQLAAFEAAMKHF
CCHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HARKFKEARDLFQEAADGPERDVAQRSRLHTTMCDRRLQQAPPLDLGSAEEHYNYGVAMI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEE
NVRNIGEARAHLEKAIQLTPGAEHIHYALALAQGLSGDFAGAQENLRIAIELEPRNRMIA
EECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHH
RQDADFAPLAHQSNIHSLLYPEKKSSW
HCCCCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA