| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116623449
Identifier: 116623449
GI number: 116623449
Start: 5522698
End: 5524620
Strand: Direct
Name: 116623449
Synonym: Acid_4358
Alternate gene names: NA
Gene position: 5522698-5524620 (Clockwise)
Preceding gene: 116623448
Following gene: 116623452
Centisome position: 55.42
GC content: 61.67
Gene sequence:
>1923_bases ATGCCAGCGGAACCACTTTCCTTTCGGGATCAGACGCGCACGCCCGCATGGCGAGTAGGGCGCGCGCTGCTCTTCGTGTT CGTCATTTTTGTCGCCTGCCCCATCCGCTATTGGCCGGTTACACCGGGAATCGACGAGACCTGGGTATTCGCGCTCAATT ACGCCGCCGCGCACGGACTCGCCACCGGACGCGATCTGGCGTGGACCACCGGACCGCTGGGATACCTCGTGTTCCCCATG GATATCGGCGGCAATCTCGCCAAAGCGCTGGCCTTTCAAATCGCCGTCTGGGCGCTCCTGATCGCTGTCTTCACCGACCT CTTTTTCCGCGCCCGAATCGCGCTCCGCAACCTTGCGGTCTTTTCGATTTTCTTCGGCCTATCCGCGCCCGTGTATTGGT TCAACTACATGGGGGTCGAGAATCTGCTGATCGCGGCCACTTTGATTCTCCTGTTTCTGGTCCGCATGCGCGGCGGTACG GTGCGCTACCTTACGGCCTTAGTGCTGATCGGAATTATTCCCCTGATCAAACTTACGGGCGGAGTGATTGCCGCCGGCGC GCTCGCGGGATTTCTGCTCGATCAAGGCATTCGCCTGCGCTGGAAGGCGCTCCGCGATATTACGCTCGGCATCCTGGTGC CGGTGACTACGGCGGCAATCGTGTGCGGGATCACCCTTCCCTCGCTTGCCGCGTTCCGGAATTACGTCATCGCCAGCCGC GATATTGCGGGAGAATTCAGCGCCGCGATGTCCACGTGGGGACGGCCCGTCGAGTTTTGGATGGGCATCGAAATCCTGAT CCTCTTAGGGGCGCTTCTGTATCTCCAGTTTCGCGAGGATCGGAAACTCGGCCGCTTTTACCTGCTCCTACTGGCTGTGC CGGTAATGATCAGCACCAAGCACGGCTTCGTGCGGCAAGACGTCCACGTGGAAAACTTCATTTGCTTCGCGGCCCTGGTT ATGGGGCTGATCGCGCTCCAGACCAGTTGGATCACGGGCAAGCGCCTGCAACTCGGAGCGCTGATTGGACTGCCTTTCCT GATGCTCTGGCAGGATTACGTTGTTCCGGTCAACGACAACCAGCCATTGCTCTCCGAAATCATTGGCATCCGCGCAGTCC GGCTCGGCGCCAAAGCGTTATTCAACTATGACGGGGTTCGCCGCAACCTGCGCGCTACGGCGGATATCGAAATGGGCAAG CACCCCGAGGCGCGCATCGAGCCGGAGATTCGCCACATCATCGGTGATTCACCCGTGGCCTCGATGTCCCTTACCTACAG CGGCGCCTACGCGGAAGGATTGAATCTTCGCGTGTACCCCGTGGTTCAGCGATACTCCGCCTACACGCCGTACCTCGACG AATTGAATGCCGCCTGGATTCGCGAACAGGGTCCGCGATTCCTGCTCTTCGGCGGCGACCCGCTGGATGGCCGCGACTCG TGGGCGGAGACGCCCGCCATGTGGCTCGAGGTCTATCGCTGGTACAACACACGGCAGCTCGGCGAACGCAATCTGCTGCT GGAACGGCGCGCGGAGCCGCGCTTTCAGCGGATGGAATCCATCGGCCGCACGGTCACGTCGCCAGCCGCGGGCTTTCCCC TTTCCGCGTCGGCCACACCGGTCTTCTGGGCCATGAACTGCCCGCTGAACACCAGGGGCAAGGTGCGCAAGTTGATTTAC CGCTTAACCGAAGTGCACGCGCTGGAGAAGACCTGTAGCGGCGTGCGCGCGCCGCGCCGCGTCCTGATGACCATGCTCGC CACTCCCGTAATGGGGAACTTCCTCCCCGGCTCGCCGGCGGAGTTCGCGGCGGTTTTCGCCGACCGGCCGCCGGCCTGCG GGGTGGACTCGATCAGCTTTGAATCGGGCCTTGGCTCCTACTCCAATCGCTGCGAAGTCGAATTTTTCCGCCCTGTGAAC TAA
Upstream 100 bases:
>100_bases GGCTGCTGCGCCTGTATCTCGCACTCCCGGTCCGGCCCTTTGCGGGGCAGATGTATATTGTGGCGCGGCCATCGAACGTG CAAACATAGCCGAAGGCTCG
Downstream 100 bases:
>100_bases CGGCCCGTCAGCCGGAGCCGGATCACTCCCCAGACCGCTTCCAGAATAATCGGCATGTCGATTTTGGAACGTCCCAGGTC GCGGTCGCGGAAAATGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MPAEPLSFRDQTRTPAWRVGRALLFVFVIFVACPIRYWPVTPGIDETWVFALNYAAAHGLATGRDLAWTTGPLGYLVFPM DIGGNLAKALAFQIAVWALLIAVFTDLFFRARIALRNLAVFSIFFGLSAPVYWFNYMGVENLLIAATLILLFLVRMRGGT VRYLTALVLIGIIPLIKLTGGVIAAGALAGFLLDQGIRLRWKALRDITLGILVPVTTAAIVCGITLPSLAAFRNYVIASR DIAGEFSAAMSTWGRPVEFWMGIEILILLGALLYLQFREDRKLGRFYLLLLAVPVMISTKHGFVRQDVHVENFICFAALV MGLIALQTSWITGKRLQLGALIGLPFLMLWQDYVVPVNDNQPLLSEIIGIRAVRLGAKALFNYDGVRRNLRATADIEMGK HPEARIEPEIRHIIGDSPVASMSLTYSGAYAEGLNLRVYPVVQRYSAYTPYLDELNAAWIREQGPRFLLFGGDPLDGRDS WAETPAMWLEVYRWYNTRQLGERNLLLERRAEPRFQRMESIGRTVTSPAAGFPLSASATPVFWAMNCPLNTRGKVRKLIY RLTEVHALEKTCSGVRAPRRVLMTMLATPVMGNFLPGSPAEFAAVFADRPPACGVDSISFESGLGSYSNRCEVEFFRPVN
Sequences:
>Translated_640_residues MPAEPLSFRDQTRTPAWRVGRALLFVFVIFVACPIRYWPVTPGIDETWVFALNYAAAHGLATGRDLAWTTGPLGYLVFPM DIGGNLAKALAFQIAVWALLIAVFTDLFFRARIALRNLAVFSIFFGLSAPVYWFNYMGVENLLIAATLILLFLVRMRGGT VRYLTALVLIGIIPLIKLTGGVIAAGALAGFLLDQGIRLRWKALRDITLGILVPVTTAAIVCGITLPSLAAFRNYVIASR DIAGEFSAAMSTWGRPVEFWMGIEILILLGALLYLQFREDRKLGRFYLLLLAVPVMISTKHGFVRQDVHVENFICFAALV MGLIALQTSWITGKRLQLGALIGLPFLMLWQDYVVPVNDNQPLLSEIIGIRAVRLGAKALFNYDGVRRNLRATADIEMGK HPEARIEPEIRHIIGDSPVASMSLTYSGAYAEGLNLRVYPVVQRYSAYTPYLDELNAAWIREQGPRFLLFGGDPLDGRDS WAETPAMWLEVYRWYNTRQLGERNLLLERRAEPRFQRMESIGRTVTSPAAGFPLSASATPVFWAMNCPLNTRGKVRKLIY RLTEVHALEKTCSGVRAPRRVLMTMLATPVMGNFLPGSPAEFAAVFADRPPACGVDSISFESGLGSYSNRCEVEFFRPVN >Mature_639_residues PAEPLSFRDQTRTPAWRVGRALLFVFVIFVACPIRYWPVTPGIDETWVFALNYAAAHGLATGRDLAWTTGPLGYLVFPMD IGGNLAKALAFQIAVWALLIAVFTDLFFRARIALRNLAVFSIFFGLSAPVYWFNYMGVENLLIAATLILLFLVRMRGGTV RYLTALVLIGIIPLIKLTGGVIAAGALAGFLLDQGIRLRWKALRDITLGILVPVTTAAIVCGITLPSLAAFRNYVIASRD IAGEFSAAMSTWGRPVEFWMGIEILILLGALLYLQFREDRKLGRFYLLLLAVPVMISTKHGFVRQDVHVENFICFAALVM GLIALQTSWITGKRLQLGALIGLPFLMLWQDYVVPVNDNQPLLSEIIGIRAVRLGAKALFNYDGVRRNLRATADIEMGKH PEARIEPEIRHIIGDSPVASMSLTYSGAYAEGLNLRVYPVVQRYSAYTPYLDELNAAWIREQGPRFLLFGGDPLDGRDSW AETPAMWLEVYRWYNTRQLGERNLLLERRAEPRFQRMESIGRTVTSPAAGFPLSASATPVFWAMNCPLNTRGKVRKLIYR LTEVHALEKTCSGVRAPRRVLMTMLATPVMGNFLPGSPAEFAAVFADRPPACGVDSISFESGLGSYSNRCEVEFFRPVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71227; Mature: 71095
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAEPLSFRDQTRTPAWRVGRALLFVFVIFVACPIRYWPVTPGIDETWVFALNYAAAHGL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEHHHHHHCC ATGRDLAWTTGPLGYLVFPMDIGGNLAKALAFQIAVWALLIAVFTDLFFRARIALRNLAV CCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSIFFGLSAPVYWFNYMGVENLLIAATLILLFLVRMRGGTVRYLTALVLIGIIPLIKLTG HHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC GVIAAGALAGFLLDQGIRLRWKALRDITLGILVPVTTAAIVCGITLPSLAAFRNYVIASR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DIAGEFSAAMSTWGRPVEFWMGIEILILLGALLYLQFREDRKLGRFYLLLLAVPVMISTK CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC HGFVRQDVHVENFICFAALVMGLIALQTSWITGKRLQLGALIGLPFLMLWQDYVVPVNDN CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCC QPLLSEIIGIRAVRLGAKALFNYDGVRRNLRATADIEMGKHPEARIEPEIRHIIGDSPVA CHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCC SMSLTYSGAYAEGLNLRVYPVVQRYSAYTPYLDELNAAWIREQGPRFLLFGGDPLDGRDS EEEEEECCCCCCCCCEEEEHHHHHHCCCCCCHHHCCHHHHHCCCCEEEEECCCCCCCCCC WAETPAMWLEVYRWYNTRQLGERNLLLERRAEPRFQRMESIGRTVTSPAAGFPLSASATP HHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC VFWAMNCPLNTRGKVRKLIYRLTEVHALEKTCSGVRAPRRVLMTMLATPVMGNFLPGSPA EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EFAAVFADRPPACGVDSISFESGLGSYSNRCEVEFFRPVN HHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCC >Mature Secondary Structure PAEPLSFRDQTRTPAWRVGRALLFVFVIFVACPIRYWPVTPGIDETWVFALNYAAAHGL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEHHHHHHCC ATGRDLAWTTGPLGYLVFPMDIGGNLAKALAFQIAVWALLIAVFTDLFFRARIALRNLAV CCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSIFFGLSAPVYWFNYMGVENLLIAATLILLFLVRMRGGTVRYLTALVLIGIIPLIKLTG HHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC GVIAAGALAGFLLDQGIRLRWKALRDITLGILVPVTTAAIVCGITLPSLAAFRNYVIASR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DIAGEFSAAMSTWGRPVEFWMGIEILILLGALLYLQFREDRKLGRFYLLLLAVPVMISTK CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC HGFVRQDVHVENFICFAALVMGLIALQTSWITGKRLQLGALIGLPFLMLWQDYVVPVNDN CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCC QPLLSEIIGIRAVRLGAKALFNYDGVRRNLRATADIEMGKHPEARIEPEIRHIIGDSPVA CHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCC SMSLTYSGAYAEGLNLRVYPVVQRYSAYTPYLDELNAAWIREQGPRFLLFGGDPLDGRDS EEEEEECCCCCCCCCEEEEHHHHHHCCCCCCHHHCCHHHHHCCCCEEEEECCCCCCCCCC WAETPAMWLEVYRWYNTRQLGERNLLLERRAEPRFQRMESIGRTVTSPAAGFPLSASATP HHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC VFWAMNCPLNTRGKVRKLIYRLTEVHALEKTCSGVRAPRRVLMTMLATPVMGNFLPGSPA EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EFAAVFADRPPACGVDSISFESGLGSYSNRCEVEFFRPVN HHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA