| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116623427
Identifier: 116623427
GI number: 116623427
Start: 5493838
End: 5495547
Strand: Reverse
Name: 116623427
Synonym: Acid_4336
Alternate gene names: NA
Gene position: 5495547-5493838 (Counterclockwise)
Preceding gene: 116623434
Following gene: 116623425
Centisome position: 55.14
GC content: 61.17
Gene sequence:
>1710_bases ATGAATGCCACGTGCATCGCCCTCTTCTTTCTGGTGGCCGCCGGATGCGTCGCGCAGCAGCGCGATGGCGAGTTCAATAA ACTGGCGGACCGATTACTCGACGAAGTTTACTTCAAGTACGATCCGGTAGCAGGCACCTCCGCCGGCTTCCATCAATACG ACGCGATGCTCTCTTCGGGGACGCGCGCGGAGATCGACGCGCAGGTTGCCGCCCTCCATAAAGCCGAAGTCGAAGTCGAG AGCTTCGGCGCGCAGGGACTCTCGCCGTTAGCTACGGCCGATCGCGAACTGCTGCTCGCGCAGATCCGCGGGCAGCTGCT CTCGCTCGAGGTAATCCGTCCCTGGGAGAAGAATCCCGACGTATATTCCTCGGGCGCGACCAACGCGGTGTACGCGATCA TGAGCCGCAAGTTCGCTCCGGCGGGGGCACGGCTGAAGAGCGTGATCGCGCGCGAGAAGTTGATTCCCGGGCTGTTTCAA GCGGCTCGGAACAACCTCAAGAATCCGCCGAAGATCTACACCGAAGTGGCGCTCGAGCAGCTCGACGGCATTTCCAGCTT CTTCCAGAATGACGTGCCCGCGGCCTTCAAAGACGTCACCGACGCGCAGTTGACGGCCGAGTTCCAGCGCACGAATCAGG GAGTGATCGACGCGCTCAAGGCATACCAGGCTTATCTGAAAGACGATCTGCTGCCGCGCTCGCACGGCGATTTCCAGATC GGCGCCGAGACATACCGCAAGAAGCTGCTCTACGACGAGATGGTGGATATTCCGCTGGACCGCCTGCTCGAAATCGGCAC CGCCGATTTGCGCCGCAATCAACAGGAGTTCAAGCGCGTGGCCGCGCAGGTGGATGCGAAGCGCACGGCCGAACAGATTC TGGCGGAGACGCTGAAGGACCATCCGAGCGGAGAGAATCTGCTATCCACTGTCCGCGATACGCTCGGCGGGCTGCGCGAG TTCATCGAGCAGCACAAGATCGTCACCATCCCTTCGAAGGTTCCGCCGATCGTGGAAGAGACGCCGCCCTTCATGCGCGC GCTGACCACGGCCTCCATGGACACGCCCGGGCCGTTCGAAAAGGTCGCCAAGGAAGCCTACTTCAATGTGACGCTGCCGG AGAAGACGTGGAGCGCCAGGCAGTCCGAGGAGTACCTGGAGGGCTTCAACCGGGGCACGATCACGAGCACCGCGATTCAC GAAGTCTATCCCGGCCATTACGTGCAGTTTTTATGGATTGCGAGCGCGCCATCGAAGGTGCGGAAACTGCTCGGGTGCAG TTCCAACGCGGAAGGCTGGGCGCACTACACGGAGCAGATGATGCTCGACGAAGGCTACGGCAAAGGCGACTTGAAATTGC GGCTCGGCCAGTTGCAGGATGCTTTGCTGCGCGACGCGCGCTTTATCGCGGGAATCCAGATGCACACCGGCAAAATGACG GTGGACCAGGCGGTGGAGTTTTTCGTCAAGGAGGGCTACCAGGTCCGGCCCGTGGCGGAGAAGGAGGCCAAGCGCGGCAC CAGCGATCCGACGTACCTGGTCTACACACTGGGCAAGCTGGAGATTCTCAAGTTACGGGAAGATTACAAGGCGATGAAGG GCGGTAGATATACGTTGCAGGGCTTCCATGACGCCTTTCTGCAGCAGGGTTACCCGCCGGTGAAGCTGGTGCGGCGCGCG ATGTTGGGGAATGACTCGCCGGTGCTGTAG
Upstream 100 bases:
>100_bases GTTATAGTTACGCAGTGCCGCGGGCAGTTGTTCCGTGCCTGCCGCGGGGATAAGGCCGGGAATCCGGGCCTTTGGCGGAG CATCGATATAATTAAAGGCG
Downstream 100 bases:
>100_bases AGATCGCTCCCTGACGGTCGCGGTTCGCATGGTGCGAGTGGGCGAGGGCTCGGCGCCCCCTGACGGTCGCGGCTCGTTTA CATCAAGAGCGAAGTGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MNATCIALFFLVAAGCVAQQRDGEFNKLADRLLDEVYFKYDPVAGTSAGFHQYDAMLSSGTRAEIDAQVAALHKAEVEVE SFGAQGLSPLATADRELLLAQIRGQLLSLEVIRPWEKNPDVYSSGATNAVYAIMSRKFAPAGARLKSVIAREKLIPGLFQ AARNNLKNPPKIYTEVALEQLDGISSFFQNDVPAAFKDVTDAQLTAEFQRTNQGVIDALKAYQAYLKDDLLPRSHGDFQI GAETYRKKLLYDEMVDIPLDRLLEIGTADLRRNQQEFKRVAAQVDAKRTAEQILAETLKDHPSGENLLSTVRDTLGGLRE FIEQHKIVTIPSKVPPIVEETPPFMRALTTASMDTPGPFEKVAKEAYFNVTLPEKTWSARQSEEYLEGFNRGTITSTAIH EVYPGHYVQFLWIASAPSKVRKLLGCSSNAEGWAHYTEQMMLDEGYGKGDLKLRLGQLQDALLRDARFIAGIQMHTGKMT VDQAVEFFVKEGYQVRPVAEKEAKRGTSDPTYLVYTLGKLEILKLREDYKAMKGGRYTLQGFHDAFLQQGYPPVKLVRRA MLGNDSPVL
Sequences:
>Translated_569_residues MNATCIALFFLVAAGCVAQQRDGEFNKLADRLLDEVYFKYDPVAGTSAGFHQYDAMLSSGTRAEIDAQVAALHKAEVEVE SFGAQGLSPLATADRELLLAQIRGQLLSLEVIRPWEKNPDVYSSGATNAVYAIMSRKFAPAGARLKSVIAREKLIPGLFQ AARNNLKNPPKIYTEVALEQLDGISSFFQNDVPAAFKDVTDAQLTAEFQRTNQGVIDALKAYQAYLKDDLLPRSHGDFQI GAETYRKKLLYDEMVDIPLDRLLEIGTADLRRNQQEFKRVAAQVDAKRTAEQILAETLKDHPSGENLLSTVRDTLGGLRE FIEQHKIVTIPSKVPPIVEETPPFMRALTTASMDTPGPFEKVAKEAYFNVTLPEKTWSARQSEEYLEGFNRGTITSTAIH EVYPGHYVQFLWIASAPSKVRKLLGCSSNAEGWAHYTEQMMLDEGYGKGDLKLRLGQLQDALLRDARFIAGIQMHTGKMT VDQAVEFFVKEGYQVRPVAEKEAKRGTSDPTYLVYTLGKLEILKLREDYKAMKGGRYTLQGFHDAFLQQGYPPVKLVRRA MLGNDSPVL >Mature_569_residues MNATCIALFFLVAAGCVAQQRDGEFNKLADRLLDEVYFKYDPVAGTSAGFHQYDAMLSSGTRAEIDAQVAALHKAEVEVE SFGAQGLSPLATADRELLLAQIRGQLLSLEVIRPWEKNPDVYSSGATNAVYAIMSRKFAPAGARLKSVIAREKLIPGLFQ AARNNLKNPPKIYTEVALEQLDGISSFFQNDVPAAFKDVTDAQLTAEFQRTNQGVIDALKAYQAYLKDDLLPRSHGDFQI GAETYRKKLLYDEMVDIPLDRLLEIGTADLRRNQQEFKRVAAQVDAKRTAEQILAETLKDHPSGENLLSTVRDTLGGLRE FIEQHKIVTIPSKVPPIVEETPPFMRALTTASMDTPGPFEKVAKEAYFNVTLPEKTWSARQSEEYLEGFNRGTITSTAIH EVYPGHYVQFLWIASAPSKVRKLLGCSSNAEGWAHYTEQMMLDEGYGKGDLKLRLGQLQDALLRDARFIAGIQMHTGKMT VDQAVEFFVKEGYQVRPVAEKEAKRGTSDPTYLVYTLGKLEILKLREDYKAMKGGRYTLQGFHDAFLQQGYPPVKLVRRA MLGNDSPVL
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63444; Mature: 63444
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATCIALFFLVAAGCVAQQRDGEFNKLADRLLDEVYFKYDPVAGTSAGFHQYDAMLSSG CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC TRAEIDAQVAALHKAEVEVESFGAQGLSPLATADRELLLAQIRGQLLSLEVIRPWEKNPD CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEHEECCCCCCCC VYSSGATNAVYAIMSRKFAPAGARLKSVIAREKLIPGLFQAARNNLKNPPKIYTEVALEQ CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LDGISSFFQNDVPAAFKDVTDAQLTAEFQRTNQGVIDALKAYQAYLKDDLLPRSHGDFQI HHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE GAETYRKKLLYDEMVDIPLDRLLEIGTADLRRNQQEFKRVAAQVDAKRTAEQILAETLKD CHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC HPSGENLLSTVRDTLGGLREFIEQHKIVTIPSKVPPIVEETPPFMRALTTASMDTPGPFE CCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHH KVAKEAYFNVTLPEKTWSARQSEEYLEGFNRGTITSTAIHEVYPGHYVQFLWIASAPSKV HHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEEEECCHHHH RKLLGCSSNAEGWAHYTEQMMLDEGYGKGDLKLRLGQLQDALLRDARFIAGIQMHTGKMT HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCEEEECCCCC VDQAVEFFVKEGYQVRPVAEKEAKRGTSDPTYLVYTLGKLEILKLREDYKAMKGGRYTLQ HHHHHHHHHHCCCEECCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEH GFHDAFLQQGYPPVKLVRRAMLGNDSPVL HHHHHHHHCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNATCIALFFLVAAGCVAQQRDGEFNKLADRLLDEVYFKYDPVAGTSAGFHQYDAMLSSG CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC TRAEIDAQVAALHKAEVEVESFGAQGLSPLATADRELLLAQIRGQLLSLEVIRPWEKNPD CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEHEECCCCCCCC VYSSGATNAVYAIMSRKFAPAGARLKSVIAREKLIPGLFQAARNNLKNPPKIYTEVALEQ CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LDGISSFFQNDVPAAFKDVTDAQLTAEFQRTNQGVIDALKAYQAYLKDDLLPRSHGDFQI HHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE GAETYRKKLLYDEMVDIPLDRLLEIGTADLRRNQQEFKRVAAQVDAKRTAEQILAETLKD CHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC HPSGENLLSTVRDTLGGLREFIEQHKIVTIPSKVPPIVEETPPFMRALTTASMDTPGPFE CCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHH KVAKEAYFNVTLPEKTWSARQSEEYLEGFNRGTITSTAIHEVYPGHYVQFLWIASAPSKV HHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEEEECCHHHH RKLLGCSSNAEGWAHYTEQMMLDEGYGKGDLKLRLGQLQDALLRDARFIAGIQMHTGKMT HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCEEEECCCCC VDQAVEFFVKEGYQVRPVAEKEAKRGTSDPTYLVYTLGKLEILKLREDYKAMKGGRYTLQ HHHHHHHHHHCCCEECCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEH GFHDAFLQQGYPPVKLVRRAMLGNDSPVL HHHHHHHHCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA