| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623381
Identifier: 116623381
GI number: 116623381
Start: 5434067
End: 5435656
Strand: Direct
Name: 116623381
Synonym: Acid_4290
Alternate gene names: NA
Gene position: 5434067-5435656 (Clockwise)
Preceding gene: 116623379
Following gene: 116623385
Centisome position: 54.53
GC content: 66.73
Gene sequence:
>1590_bases ATGCGATCTTCGATGGCGGTGAGAGTCGGGGTGGCGGGGGTGTTTGGATTCGCTCTGGTGCAATTTGCGCAGGTCAGCAG GGAGGCGACGCTGACGGTGCGGATTGTGGATGCGGCGACGGGGAGGGCGACTCCGGTGCGGGTGCGGCTGGAGGATAGCA ATCGGGTGCGGCCGCGGGTGCGGGGGGCGGTGGCGGTGTCGGACTCGGCGATTCCGGTGCCGAAGCAGGCGATCGCGGTG ATGTGGGGGCAGAACGACCGGGCGCAGGGATATGCGATCCAGCCGGACGGGTCGTTCTACGTGGATGGGGCGTTCGAGGT GAAGGTGCCGGCGGGCAGGTATTCGCTGCTGGTGACGAAGGGCAACGAGTACACGCGGGTGACCGACACGGTGGAGCTGG CGGCGGGGGCGGCGGCGGCGCGCGAGTACAAGATGACGCGCTGGATCGATATGCCGGGGCGCGGATGGTATTCGAGCGAC GATCACATTCACCTGCGGCGGTCGCCGGGGGACGATCACGCGATTGCGCAGTGGATCGCGGCGGAGGATATCCACGTGGG GCATTTGCTGCAGATGGGCGATTTCTGGACGCTGTATTTCGCGCAGTACGCGTTCGGGGAGCGCGGGCGGTATGCGGAGG CGGGGCGGATTTTGTCGCCGGGGCAGGAGGATCCGCGGACGCCGGAGATCGGGCACACGATCTCGCTGGGGGCGGACGAT TTTGCGCGAGCGCAGGGCGATTATTACTCGTTCGACAGGCTCTTCGACCGGGTACACGAGCTGGGCGGAGTGTCGGGGTT CGCGCACCAGGGGATGAGCTTCCACGGGTATCGCGGGATGGCGTTGACGACGCTGCGCGGGAAGACGGACTTTCTGGAGC TGGCGCAGTTCTGCGTGCCGGAGGGTCCGCTGGCGCTGGAGCACTACTACGAGTTTCTGGACCTGGGGATCAAGCTGACG GCGCTGGCGGGGTCGGATTTCCCGTGGTGCGGGCAGGGTCCGGGACCGGCGGCGCAGATCGGCAACGCGCGGTTCTACAC GTATACCGGGGGCGAGTTGAATTTTGCGCGGTGGATGGCGGGGATGAAGGCGGGGCACACGTTCGTGACCACGGGTCCGC TGCTGACGCTGACGGTGAACCGGAAGATGCCGGGCGATTCGGTGGACGTGACGAAGGGGAGCACGGTGAGCATTGCGGCG GAGGCGCTCGCGCCGGCAACGGTGGGGACGGTGGAGATTGTCGGTCACGGCAAGGTGCTGGCCAAGGCGAGCGGGAGGGT GGCGCTCTCGCTGCCGGTGGATCACGGGATGTGGATCGCGGCCAGGTGCGACGCGGGGAATGGAATGGTGGCGCACACCA CGCCGGTGTACGTGACGGTGAACGGGGGCGGCTTCGAGAATCGCGCGAATTACCGGGAGAACCTGGCGAAGATGGAAGGG TATCTCAAGGAGCTCGAGGGGGAGCTGGCATCACCGGGGACCAGTGTGGACTCGCAGACCTTCCGGCATAAGGCGCAGTT GCAGAGGGAGATTGCGGAGGCGCGTGGGAAGTTGCGGGAGCTAGGTGGGAGTGCAGGTCTGGGCAACTAG
Upstream 100 bases:
>100_bases GATCAAAACACGTTCTCGCCAAGACGCCAAGAACGCCAAGAAAATCTTAACCGCGTAAGTAAGCATCGCCGCGCATGCGC AGGTGTATACTGCGGGCGTT
Downstream 100 bases:
>100_bases CGCGCGAACCTGGGAGAGCAACGATTCGGAGTTGGAACCTTTCAGAACGATGCGTTCGACGTAGCCGTTGAGGCGGCGGC GGTCGTCGGCGGTGAGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MRSSMAVRVGVAGVFGFALVQFAQVSREATLTVRIVDAATGRATPVRVRLEDSNRVRPRVRGAVAVSDSAIPVPKQAIAV MWGQNDRAQGYAIQPDGSFYVDGAFEVKVPAGRYSLLVTKGNEYTRVTDTVELAAGAAAAREYKMTRWIDMPGRGWYSSD DHIHLRRSPGDDHAIAQWIAAEDIHVGHLLQMGDFWTLYFAQYAFGERGRYAEAGRILSPGQEDPRTPEIGHTISLGADD FARAQGDYYSFDRLFDRVHELGGVSGFAHQGMSFHGYRGMALTTLRGKTDFLELAQFCVPEGPLALEHYYEFLDLGIKLT ALAGSDFPWCGQGPGPAAQIGNARFYTYTGGELNFARWMAGMKAGHTFVTTGPLLTLTVNRKMPGDSVDVTKGSTVSIAA EALAPATVGTVEIVGHGKVLAKASGRVALSLPVDHGMWIAARCDAGNGMVAHTTPVYVTVNGGGFENRANYRENLAKMEG YLKELEGELASPGTSVDSQTFRHKAQLQREIAEARGKLRELGGSAGLGN
Sequences:
>Translated_529_residues MRSSMAVRVGVAGVFGFALVQFAQVSREATLTVRIVDAATGRATPVRVRLEDSNRVRPRVRGAVAVSDSAIPVPKQAIAV MWGQNDRAQGYAIQPDGSFYVDGAFEVKVPAGRYSLLVTKGNEYTRVTDTVELAAGAAAAREYKMTRWIDMPGRGWYSSD DHIHLRRSPGDDHAIAQWIAAEDIHVGHLLQMGDFWTLYFAQYAFGERGRYAEAGRILSPGQEDPRTPEIGHTISLGADD FARAQGDYYSFDRLFDRVHELGGVSGFAHQGMSFHGYRGMALTTLRGKTDFLELAQFCVPEGPLALEHYYEFLDLGIKLT ALAGSDFPWCGQGPGPAAQIGNARFYTYTGGELNFARWMAGMKAGHTFVTTGPLLTLTVNRKMPGDSVDVTKGSTVSIAA EALAPATVGTVEIVGHGKVLAKASGRVALSLPVDHGMWIAARCDAGNGMVAHTTPVYVTVNGGGFENRANYRENLAKMEG YLKELEGELASPGTSVDSQTFRHKAQLQREIAEARGKLRELGGSAGLGN >Mature_529_residues MRSSMAVRVGVAGVFGFALVQFAQVSREATLTVRIVDAATGRATPVRVRLEDSNRVRPRVRGAVAVSDSAIPVPKQAIAV MWGQNDRAQGYAIQPDGSFYVDGAFEVKVPAGRYSLLVTKGNEYTRVTDTVELAAGAAAAREYKMTRWIDMPGRGWYSSD DHIHLRRSPGDDHAIAQWIAAEDIHVGHLLQMGDFWTLYFAQYAFGERGRYAEAGRILSPGQEDPRTPEIGHTISLGADD FARAQGDYYSFDRLFDRVHELGGVSGFAHQGMSFHGYRGMALTTLRGKTDFLELAQFCVPEGPLALEHYYEFLDLGIKLT ALAGSDFPWCGQGPGPAAQIGNARFYTYTGGELNFARWMAGMKAGHTFVTTGPLLTLTVNRKMPGDSVDVTKGSTVSIAA EALAPATVGTVEIVGHGKVLAKASGRVALSLPVDHGMWIAARCDAGNGMVAHTTPVYVTVNGGGFENRANYRENLAKMEG YLKELEGELASPGTSVDSQTFRHKAQLQREIAEARGKLRELGGSAGLGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57154; Mature: 57154
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSMAVRVGVAGVFGFALVQFAQVSREATLTVRIVDAATGRATPVRVRLEDSNRVRPRV CCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCHH RGAVAVSDSAIPVPKQAIAVMWGQNDRAQGYAIQPDGSFYVDGAFEVKVPAGRYSLLVTK CEEEEECCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEECCEEEEEECCCCEEEEEEC GNEYTRVTDTVELAAGAAAAREYKMTRWIDMPGRGWYSSDDHIHLRRSPGDDHAIAQWIA CCCEEEEEHHHHHHHCHHHHHHEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHH AEDIHVGHLLQMGDFWTLYFAQYAFGERGRYAEAGRILSPGQEDPRTPEIGHTISLGADD HCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCH FARAQGDYYSFDRLFDRVHELGGVSGFAHQGMSFHGYRGMALTTLRGKTDFLELAQFCVP HHHCCCCCCHHHHHHHHHHHHCCCCCHHHCCCEECCCCCEEEEEECCCHHHHHHHHHHCC EGPLALEHYYEFLDLGIKLTALAGSDFPWCGQGPGPAAQIGNARFYTYTGGELNFARWMA CCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHCCCEEEEEEECCCEEHHHHHH GMKAGHTFVTTGPLLTLTVNRKMPGDSVDVTKGSTVSIAAEALAPATVGTVEIVGHGKVL HHHCCCEEEEECCEEEEEECCCCCCCCEEECCCCEEEEEHHHHCCCCCCEEEEEECCEEE AKASGRVALSLPVDHGMWIAARCDAGNGMVAHTTPVYVTVNGGGFENRANYRENLAKMEG EECCCCEEEEEECCCCEEEEEEECCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHHH YLKELEGELASPGTSVDSQTFRHKAQLQREIAEARGKLRELGGSAGLGN HHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRSSMAVRVGVAGVFGFALVQFAQVSREATLTVRIVDAATGRATPVRVRLEDSNRVRPRV CCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCHH RGAVAVSDSAIPVPKQAIAVMWGQNDRAQGYAIQPDGSFYVDGAFEVKVPAGRYSLLVTK CEEEEECCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEECCEEEEEECCCCEEEEEEC GNEYTRVTDTVELAAGAAAAREYKMTRWIDMPGRGWYSSDDHIHLRRSPGDDHAIAQWIA CCCEEEEEHHHHHHHCHHHHHHEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHH AEDIHVGHLLQMGDFWTLYFAQYAFGERGRYAEAGRILSPGQEDPRTPEIGHTISLGADD HCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCH FARAQGDYYSFDRLFDRVHELGGVSGFAHQGMSFHGYRGMALTTLRGKTDFLELAQFCVP HHHCCCCCCHHHHHHHHHHHHCCCCCHHHCCCEECCCCCEEEEEECCCHHHHHHHHHHCC EGPLALEHYYEFLDLGIKLTALAGSDFPWCGQGPGPAAQIGNARFYTYTGGELNFARWMA CCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHCCCEEEEEEECCCEEHHHHHH GMKAGHTFVTTGPLLTLTVNRKMPGDSVDVTKGSTVSIAAEALAPATVGTVEIVGHGKVL HHHCCCEEEEECCEEEEEECCCCCCCCEEECCCCEEEEEHHHHCCCCCCEEEEEECCEEE AKASGRVALSLPVDHGMWIAARCDAGNGMVAHTTPVYVTVNGGGFENRANYRENLAKMEG EECCCCEEEEEECCCCEEEEEEECCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHHH YLKELEGELASPGTSVDSQTFRHKAQLQREIAEARGKLRELGGSAGLGN HHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA