| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116623363
GI number: 116623363
Start: 5409806
End: 5412304
Strand: Reverse
Name: macB [H]
Synonym: Acid_4272
Alternate gene names: 116623363
Gene position: 5412304-5409806 (Counterclockwise)
Preceding gene: 116623364
Following gene: 116623362
Centisome position: 54.31
GC content: 65.43
Gene sequence:
>2499_bases ATGACGCGGATCCTGCAGGACGTTCAGTTTGCTGTGCGCAGCTTTCGGCGGTCGCCGGTCTTCACCTCGGTCGCGGTACT TTCGCTGGCTCTCGGAATCGGCGCAAACACCGCCATCTTCACGCTGGTGGACCAGCTGATTCTGCGCCTGCTGCCGGTGC AGGAGCCGGAGCGAATCGTGCTGCTGGCGGGCAACGGCCGGCACTACGGCGGCAACAACGGCCGCAACGCCCTCTCCTAT CCGATGTACCAGGACCTGCGCGACCGCAATCAGGTTTTCAGCGGCATGATGTGCCGCTATCGCTTCAATCCCATCGTCAA TATCGGGCAGCAGACCGAGGTCGGGATCGGCGAACTGGTTTCGGGGAACTACTTCCCGCTGCTGGGCGTGCGGCCCGCGC TTGGCCGGCTCTTCACCTCGTCCGATGATTTGCGGGCGGGACAGCATCCGCTGATCGTCCTCAGCTACGGCTGGTGGCAA ACGCGGTTCGCCGGCGATCCGCGGATTGTCGGGCAGACCATCCGGGTCAACAGCTATCCACTCACGGTGGCCGGAGTGGC GCAGGCCGGGTTCGAGGGCACGGAGCCCGGATTGCCCGCGCAGTTTTTCATCCCGATGGTGATGGCGGCCCCAGTGCGGC CGGGATTCACCAACATGTACGACCGGCGGCAGCGTTGGGTGAATGCGTACGGCCGGTTAAAGCCGGGAGTTTCCATGCAA CAGGCCGAGGCCGGGCTGCAGCCGCTGTTTCACCAGATCATCGAAGGCGAAGTCGTGATGCCGCCGTTCCGGACCGCGAC CCCGTTCGATAAGGAACAGTTCCTGCGCATGTCGATGAAGGTGATGCCGGGCTCGCAGGGGAACACCAATCTGCGGCGCC AGTATGAAAAGCCGCTTTGGGTGCTGATGGGGGTGGTCGGGCTGGTGCTGTTGATCGCGTGCGCCAACCTGGCGAGCCTG TTGACGGCGAGGGCGGCGTCGCGGCAGAAGGAGATTGCGATTCGCCTGGCGATCGGGTCGAGCCGGGGGCGGATGATCCA GCAGCTGTTGACGGAGAGCCTGCTACTGGCGGCGGCGGGCGGCGCGGCCGGAGTGGCGCTGGCGGCGGCGATGGCCAAGG GGCTGCTCGCGTTTCTTCCCACCAATATCACCGGCTACTCGATCGCCGCGACGCCGGACGTGCGTATGATGCTGTTCACG TGCGGCCTATCGCTGCTCACCGGGGTGGCATTCGGGCTGGTGCCGGCACTGCAATCGACGCGTCCGAATATCGCCGGCAC GTTGAAGGATCAGTCGGGCGGAGTGGTGGGCGGCGGCGCGCCGGTGCGGCTGCGCAAGACGCTGGTGGCGGCGCAGGTGG CGCTCTCGCTGCTGCTGTTGATTGGCGCGGGATTATTTGTGCGCAGCCTTTCCAACCTGCGCACGTTGAACCCCGGGTTT CAGACAGGGAACCTGATTCAGTTCGTGGTATCGCCGGGTTCTGCCGGTTACACCGAGCAGCGCCGCGCTGAGTTCTACCG CCGTGCCGAAGAACGCCTGGGGGCCCTGCCGGGAGTTCGCGGCGTGGGCATGGCGAACGTCGGCGTACTGACCAACAACG AGTGGGATAACGGCATCACCATCCAGGGTTACCAGGCCAAGCCGGGCGAGGAAATGGATCCGCACTTCAACGCGGTGAGC CCGGGCTATTTCGAGGCCCTCGGAATCCACCTGCTGGCAGGGCGGAATTTCTCCGCGAAGGATGTTCTCGGTGCGCCGAA GGTGGCGATTGTGAATGCCAGCTTCGTGAAACGCTATTTCGGCGACGGAATCGCGGTGGGCCGCCGGCTCGGGCAAGGCA CCGACCCGGGGACGCCGACCAATATCGAGATCGTCGGCGTGGTCAACGACACGCGCTATGAGAGCCTGCGCGATCAGATT CCGCTGCTGGTCTATTTGTGCGGGCCGCAGCTTGTGAGCAATACCCAGATCGCCTATGTACGGACGGTACGCGAGCCGGA TTCGGCGTTCGGCGCGGTGCGCGCGGCGCTGCACGAGCTCGACCCCAACCTGCCGGTCTCGGGGATGAAGACGCTGGAGC GGCAGCTCGACGAATCGCTGGTGACGGAGCGCATGATCGCGACGCTATCGACGGCCTTCGGGGCTCTGGCGACGGTGCTG GCGGTGATCGGGCTGTACGGAGTGATGGCGTTTATGGTGACGCGCCGCGCGCGCGAGATCGGCATCCGGATGGCGCTGGG CGCGCAGCAGGGGAATGTGGTCTGGCTGGTAATGCGCGAAGTGTTGGGACTGGTGGCGGTAGGGATCGCGGCGGGCCTGC CCGCGGCTTTTGGATTGGCGAGCCTGGTGCGGACGCAGTTGTATGGCATCGGGCCCAACGATCCGTTGTCGATCGTTGTG GCCACGCTGGTGCTGGCGATGGTCGCGGTGCTCGCCGGATATATCCCGGCACGCCGCGCGGCTACGTACGACCCGGTGAA TGTGCTGCGGGCGGAGTAG
Upstream 100 bases:
>100_bases ACGTTTCTGCGTGATCGAAGACCCGGCCGGCGCGGTCTGCGCCCTGTTCGAAGCGGCGAAATCGCTGTAACTATTTCCGG TTCCGGCAGTATACCGCTGC
Downstream 100 bases:
>100_bases CTTCAATCCCTGACCGCCGCGGCGCGACGTGTCCCCTTTGTTCCTGTTTTTGCGCTTTCGTCCTTAGAGTCTGTTGAAAC AAACCCTCGACTCGAAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 832; Mature: 831
Protein sequence:
>832_residues MTRILQDVQFAVRSFRRSPVFTSVAVLSLALGIGANTAIFTLVDQLILRLLPVQEPERIVLLAGNGRHYGGNNGRNALSY PMYQDLRDRNQVFSGMMCRYRFNPIVNIGQQTEVGIGELVSGNYFPLLGVRPALGRLFTSSDDLRAGQHPLIVLSYGWWQ TRFAGDPRIVGQTIRVNSYPLTVAGVAQAGFEGTEPGLPAQFFIPMVMAAPVRPGFTNMYDRRQRWVNAYGRLKPGVSMQ QAEAGLQPLFHQIIEGEVVMPPFRTATPFDKEQFLRMSMKVMPGSQGNTNLRRQYEKPLWVLMGVVGLVLLIACANLASL LTARAASRQKEIAIRLAIGSSRGRMIQQLLTESLLLAAAGGAAGVALAAAMAKGLLAFLPTNITGYSIAATPDVRMMLFT CGLSLLTGVAFGLVPALQSTRPNIAGTLKDQSGGVVGGGAPVRLRKTLVAAQVALSLLLLIGAGLFVRSLSNLRTLNPGF QTGNLIQFVVSPGSAGYTEQRRAEFYRRAEERLGALPGVRGVGMANVGVLTNNEWDNGITIQGYQAKPGEEMDPHFNAVS PGYFEALGIHLLAGRNFSAKDVLGAPKVAIVNASFVKRYFGDGIAVGRRLGQGTDPGTPTNIEIVGVVNDTRYESLRDQI PLLVYLCGPQLVSNTQIAYVRTVREPDSAFGAVRAALHELDPNLPVSGMKTLERQLDESLVTERMIATLSTAFGALATVL AVIGLYGVMAFMVTRRAREIGIRMALGAQQGNVVWLVMREVLGLVAVGIAAGLPAAFGLASLVRTQLYGIGPNDPLSIVV ATLVLAMVAVLAGYIPARRAATYDPVNVLRAE
Sequences:
>Translated_832_residues MTRILQDVQFAVRSFRRSPVFTSVAVLSLALGIGANTAIFTLVDQLILRLLPVQEPERIVLLAGNGRHYGGNNGRNALSY PMYQDLRDRNQVFSGMMCRYRFNPIVNIGQQTEVGIGELVSGNYFPLLGVRPALGRLFTSSDDLRAGQHPLIVLSYGWWQ TRFAGDPRIVGQTIRVNSYPLTVAGVAQAGFEGTEPGLPAQFFIPMVMAAPVRPGFTNMYDRRQRWVNAYGRLKPGVSMQ QAEAGLQPLFHQIIEGEVVMPPFRTATPFDKEQFLRMSMKVMPGSQGNTNLRRQYEKPLWVLMGVVGLVLLIACANLASL LTARAASRQKEIAIRLAIGSSRGRMIQQLLTESLLLAAAGGAAGVALAAAMAKGLLAFLPTNITGYSIAATPDVRMMLFT CGLSLLTGVAFGLVPALQSTRPNIAGTLKDQSGGVVGGGAPVRLRKTLVAAQVALSLLLLIGAGLFVRSLSNLRTLNPGF QTGNLIQFVVSPGSAGYTEQRRAEFYRRAEERLGALPGVRGVGMANVGVLTNNEWDNGITIQGYQAKPGEEMDPHFNAVS PGYFEALGIHLLAGRNFSAKDVLGAPKVAIVNASFVKRYFGDGIAVGRRLGQGTDPGTPTNIEIVGVVNDTRYESLRDQI PLLVYLCGPQLVSNTQIAYVRTVREPDSAFGAVRAALHELDPNLPVSGMKTLERQLDESLVTERMIATLSTAFGALATVL AVIGLYGVMAFMVTRRAREIGIRMALGAQQGNVVWLVMREVLGLVAVGIAAGLPAAFGLASLVRTQLYGIGPNDPLSIVV ATLVLAMVAVLAGYIPARRAATYDPVNVLRAE >Mature_831_residues TRILQDVQFAVRSFRRSPVFTSVAVLSLALGIGANTAIFTLVDQLILRLLPVQEPERIVLLAGNGRHYGGNNGRNALSYP MYQDLRDRNQVFSGMMCRYRFNPIVNIGQQTEVGIGELVSGNYFPLLGVRPALGRLFTSSDDLRAGQHPLIVLSYGWWQT RFAGDPRIVGQTIRVNSYPLTVAGVAQAGFEGTEPGLPAQFFIPMVMAAPVRPGFTNMYDRRQRWVNAYGRLKPGVSMQQ AEAGLQPLFHQIIEGEVVMPPFRTATPFDKEQFLRMSMKVMPGSQGNTNLRRQYEKPLWVLMGVVGLVLLIACANLASLL TARAASRQKEIAIRLAIGSSRGRMIQQLLTESLLLAAAGGAAGVALAAAMAKGLLAFLPTNITGYSIAATPDVRMMLFTC GLSLLTGVAFGLVPALQSTRPNIAGTLKDQSGGVVGGGAPVRLRKTLVAAQVALSLLLLIGAGLFVRSLSNLRTLNPGFQ TGNLIQFVVSPGSAGYTEQRRAEFYRRAEERLGALPGVRGVGMANVGVLTNNEWDNGITIQGYQAKPGEEMDPHFNAVSP GYFEALGIHLLAGRNFSAKDVLGAPKVAIVNASFVKRYFGDGIAVGRRLGQGTDPGTPTNIEIVGVVNDTRYESLRDQIP LLVYLCGPQLVSNTQIAYVRTVREPDSAFGAVRAALHELDPNLPVSGMKTLERQLDESLVTERMIATLSTAFGALATVLA VIGLYGVMAFMVTRRAREIGIRMALGAQQGNVVWLVMREVLGLVAVGIAAGLPAAFGLASLVRTQLYGIGPNDPLSIVVA TLVLAMVAVLAGYIPARRAATYDPVNVLRAE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=306, Percent_Identity=24.8366013071895, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 89411; Mature: 89279
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRILQDVQFAVRSFRRSPVFTSVAVLSLALGIGANTAIFTLVDQLILRLLPVQEPERIV CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEE LLAGNGRHYGGNNGRNALSYPMYQDLRDRNQVFSGMMCRYRFNPIVNIGQQTEVGIGELV EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEECCCCCCCCHHHHC SGNYFPLLGVRPALGRLFTSSDDLRAGQHPLIVLSYGWWQTRFAGDPRIVGQTIRVNSYP CCCCEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEECCCCCEECEEEEECCCC LTVAGVAQAGFEGTEPGLPAQFFIPMVMAAPVRPGFTNMYDRRQRWVNAYGRLKPGVSMQ EEEEHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH QAEAGLQPLFHQIIEGEVVMPPFRTATPFDKEQFLRMSMKVMPGSQGNTNLRRQYEKPLW HHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCHHH VLMGVVGLVLLIACANLASLLTARAASRQKEIAIRLAIGSSRGRMIQQLLTESLLLAAAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCC GAAGVALAAAMAKGLLAFLPTNITGYSIAATPDVRMMLFTCGLSLLTGVAFGLVPALQST CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC RPNIAGTLKDQSGGVVGGGAPVRLRKTLVAAQVALSLLLLIGAGLFVRSLSNLRTLNPGF CCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QTGNLIQFVVSPGSAGYTEQRRAEFYRRAEERLGALPGVRGVGMANVGVLTNNEWDNGIT CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEE IQGYQAKPGEEMDPHFNAVSPGYFEALGIHLLAGRNFSAKDVLGAPKVAIVNASFVKRYF EEECCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCHHHHCCCCCEEEECHHHHHHHH GDGIAVGRRLGQGTDPGTPTNIEIVGVVNDTRYESLRDQIPLLVYLCGPQLVSNTQIAYV CCHHHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCEEEEECCCHHHCCCEEEEE RTVREPDSAFGAVRAALHELDPNLPVSGMKTLERQLDESLVTERMIATLSTAFGALATVL EEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVIGLYGVMAFMVTRRAREIGIRMALGAQQGNVVWLVMREVLGLVAVGIAAGLPAAFGLA HHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHH SLVRTQLYGIGPNDPLSIVVATLVLAMVAVLAGYIPARRAATYDPVNVLRAE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEECC >Mature Secondary Structure TRILQDVQFAVRSFRRSPVFTSVAVLSLALGIGANTAIFTLVDQLILRLLPVQEPERIV CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEE LLAGNGRHYGGNNGRNALSYPMYQDLRDRNQVFSGMMCRYRFNPIVNIGQQTEVGIGELV EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEECCCCCCCCHHHHC SGNYFPLLGVRPALGRLFTSSDDLRAGQHPLIVLSYGWWQTRFAGDPRIVGQTIRVNSYP CCCCEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEECCCCCEECEEEEECCCC LTVAGVAQAGFEGTEPGLPAQFFIPMVMAAPVRPGFTNMYDRRQRWVNAYGRLKPGVSMQ EEEEHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH QAEAGLQPLFHQIIEGEVVMPPFRTATPFDKEQFLRMSMKVMPGSQGNTNLRRQYEKPLW HHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCHHH VLMGVVGLVLLIACANLASLLTARAASRQKEIAIRLAIGSSRGRMIQQLLTESLLLAAAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCC GAAGVALAAAMAKGLLAFLPTNITGYSIAATPDVRMMLFTCGLSLLTGVAFGLVPALQST CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC RPNIAGTLKDQSGGVVGGGAPVRLRKTLVAAQVALSLLLLIGAGLFVRSLSNLRTLNPGF CCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QTGNLIQFVVSPGSAGYTEQRRAEFYRRAEERLGALPGVRGVGMANVGVLTNNEWDNGIT CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEE IQGYQAKPGEEMDPHFNAVSPGYFEALGIHLLAGRNFSAKDVLGAPKVAIVNASFVKRYF EEECCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCHHHHCCCCCEEEECHHHHHHHH GDGIAVGRRLGQGTDPGTPTNIEIVGVVNDTRYESLRDQIPLLVYLCGPQLVSNTQIAYV CCHHHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCEEEEECCCHHHCCCEEEEE RTVREPDSAFGAVRAALHELDPNLPVSGMKTLERQLDESLVTERMIATLSTAFGALATVL EEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVIGLYGVMAFMVTRRAREIGIRMALGAQQGNVVWLVMREVLGLVAVGIAAGLPAAFGLA HHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHH SLVRTQLYGIGPNDPLSIVVATLVLAMVAVLAGYIPARRAATYDPVNVLRAE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]