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The map label for this gene is cphB [H]

Identifier: 116623339

GI number: 116623339

Start: 5374389

End: 5375279

Strand: Reverse

Name: cphB [H]

Synonym: Acid_4248

Alternate gene names: 116623339

Gene position: 5375279-5374389 (Counterclockwise)

Preceding gene: 116623340

Following gene: 116623335

Centisome position: 53.94

GC content: 59.15

Gene sequence:

>891_bases
ATGAAATACGCACTCAGCCTTGTAACCACGCTTTTGGCGGGAACACTATGGGCACAATCGCCCGAGTACGGCCCTGCCAG
CGGCACGCTCGTAATTCAGGGAGGAGGCTCCGATGCCGGCACAGGAATCTTCGAGACCTTCATCAACAAAGCCGGCGGAT
TGGGCGCCAAAATCATCGTGGTTCCCACCGCGGGCGGCAATCGAGCCGCCGACGGCAGCCTCATAGTATATGAGGAAGAG
AAGGTGCTCGCCAGTTGGAAGAAACGCGGCGCCACCAACGTTCACATGCTGCACACCCACGACCCAAAGATCGCCGACAC
GGAGGAGTTTGCCAAGGTACTTCGAGATGCGAGGGGTGTCTGGTTCGTTGGCGGCCGCCAATGGAACATCGTCGATTCCT
ATGCCAATACCCTGACTTTTCGTGAATTTCACAAGGTCCTGGAGCGCGGCGGCGTGATCGGCGGCAGTTCCGCCGGCGCC
ACTATCCAGGGCGATTACCTGGTGCGCGGCGCTATCGCAGGTTCGGAAATCATGATGACGCCCGAGCCCGAACATGAGCA
CGGCTTTGCCTTTCTGCGAAAGGTCGCCATCGATCAGCACATCAACACGCGCAATCGCTGGGACGATTTGATTCCGGTGA
TCAAGAAGTACCCCGCGATGCTTGGCATCGGACTTTCAGAGGGGACGGCTATCGTGGTCACGGGCGATCGCTTCGAGGTG
ATCGGCAAGTGGAAGGTCGCGATCCACGACAACCGGCATCTCTATCAGCCCTGGGAGAAGCCGTACTACATTCTTTCGCC
TGGCGATGTGTACAACATGAAAACCCGCGCCATCGAGAAGTACGGCACGGGGTCGCCGGTACCGCCGCCGGCGATTGCCG
CCGCGAAATAG

Upstream 100 bases:

>100_bases
GCCCGACGGCAGCAAGCCCGCCGAGCCGCCCAAGCCCGAGAAGAAGCCTCCACTCAACGACAAGTAGCCCGGGCACGGGT
TTCAGGGTATCCTCCTCTTA

Downstream 100 bases:

>100_bases
AGCCCGGCGATTCGCGCGCAGGCGAGACGCTCCCTTACGTCGCGGCTCTGATTTCGGCGGGTCTTCGCGACCGGAGAGCA
AACTCGGGAGATATTTTCCC

Product: cyanophycinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKYALSLVTTLLAGTLWAQSPEYGPASGTLVIQGGGSDAGTGIFETFINKAGGLGAKIIVVPTAGGNRAADGSLIVYEEE
KVLASWKKRGATNVHMLHTHDPKIADTEEFAKVLRDARGVWFVGGRQWNIVDSYANTLTFREFHKVLERGGVIGGSSAGA
TIQGDYLVRGAIAGSEIMMTPEPEHEHGFAFLRKVAIDQHINTRNRWDDLIPVIKKYPAMLGIGLSEGTAIVVTGDRFEV
IGKWKVAIHDNRHLYQPWEKPYYILSPGDVYNMKTRAIEKYGTGSPVPPPAIAAAK

Sequences:

>Translated_296_residues
MKYALSLVTTLLAGTLWAQSPEYGPASGTLVIQGGGSDAGTGIFETFINKAGGLGAKIIVVPTAGGNRAADGSLIVYEEE
KVLASWKKRGATNVHMLHTHDPKIADTEEFAKVLRDARGVWFVGGRQWNIVDSYANTLTFREFHKVLERGGVIGGSSAGA
TIQGDYLVRGAIAGSEIMMTPEPEHEHGFAFLRKVAIDQHINTRNRWDDLIPVIKKYPAMLGIGLSEGTAIVVTGDRFEV
IGKWKVAIHDNRHLYQPWEKPYYILSPGDVYNMKTRAIEKYGTGSPVPPPAIAAAK
>Mature_296_residues
MKYALSLVTTLLAGTLWAQSPEYGPASGTLVIQGGGSDAGTGIFETFINKAGGLGAKIIVVPTAGGNRAADGSLIVYEEE
KVLASWKKRGATNVHMLHTHDPKIADTEEFAKVLRDARGVWFVGGRQWNIVDSYANTLTFREFHKVLERGGVIGGSSAGA
TIQGDYLVRGAIAGSEIMMTPEPEHEHGFAFLRKVAIDQHINTRNRWDDLIPVIKKYPAMLGIGLSEGTAIVVTGDRFEV
IGKWKVAIHDNRHLYQPWEKPYYILSPGDVYNMKTRAIEKYGTGSPVPPPAIAAAK

Specific function: Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides [H]

COG id: COG4242

COG function: function code QP; Cyanophycinase and related exopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320
- InterPro:   IPR011811 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: =3.4.15.6 [H]

Molecular weight: Translated: 32129; Mature: 32129

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYALSLVTTLLAGTLWAQSPEYGPASGTLVIQGGGSDAGTGIFETFINKAGGLGAKIIV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEE
VPTAGGNRAADGSLIVYEEEKVLASWKKRGATNVHMLHTHDPKIADTEEFAKVLRDARGV
EECCCCCCCCCCCEEEEECHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCE
WFVGGRQWNIVDSYANTLTFREFHKVLERGGVIGGSSAGATIQGDYLVRGAIAGSEIMMT
EEECCEEEEEEHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEECCEEEEEEECCCEEEEC
PEPEHEHGFAFLRKVAIDQHINTRNRWDDLIPVIKKYPAMLGIGLSEGTAIVVTGDRFEV
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHEEECCCCCCEEEEECCCEEE
IGKWKVAIHDNRHLYQPWEKPYYILSPGDVYNMKTRAIEKYGTGSPVPPPAIAAAK
EEEEEEEEECCCCCCCCCCCCEEEECCCCEECHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKYALSLVTTLLAGTLWAQSPEYGPASGTLVIQGGGSDAGTGIFETFINKAGGLGAKIIV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEE
VPTAGGNRAADGSLIVYEEEKVLASWKKRGATNVHMLHTHDPKIADTEEFAKVLRDARGV
EECCCCCCCCCCCEEEEECHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCE
WFVGGRQWNIVDSYANTLTFREFHKVLERGGVIGGSSAGATIQGDYLVRGAIAGSEIMMT
EEECCEEEEEEHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEECCEEEEEEECCCEEEEC
PEPEHEHGFAFLRKVAIDQHINTRNRWDDLIPVIKKYPAMLGIGLSEGTAIVVTGDRFEV
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHEEECCCCCCEEEEECCCEEE
IGKWKVAIHDNRHLYQPWEKPYYILSPGDVYNMKTRAIEKYGTGSPVPPPAIAAAK
EEEEEEEEECCCCCCCCCCCCEEEECCCCEECHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10951215 [H]