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The map label for this gene is ycjS [C]

Identifier: 116623332

GI number: 116623332

Start: 5367043

End: 5368593

Strand: Reverse

Name: ycjS [C]

Synonym: Acid_4241

Alternate gene names: 116623332

Gene position: 5368593-5367043 (Counterclockwise)

Preceding gene: 116623333

Following gene: 116623331

Centisome position: 53.87

GC content: 62.67

Gene sequence:

>1551_bases
ATGGCATTTGATGGTATCAGTCGACGACACTTTTTCTATGGTTCACTGCTGGCCGGCGCTGTTCCGGCGGGCGGGTTCGG
CAGCACTCCTTCCCTAAAGGGTCTTGGGTACAAATCCCCCAACGAGAAGCTCAATATCGCTTCCATCGGAGCCGGCGGCA
AGGCGGCAAGCGACATCCACGGCTGCGCGCCGACGGAAAACATTGTCGCGCTTTGCGATGTGGACGATAAGCAGGCGGCC
AATATCTACAAGCAATTCGAGAAGCCGCCCAAGTATAAAGATTTCCGCAAGATGCTCGACAAGGAAGGCAAAAATATCGA
TGCCGTGATCGTGACCATTCCCGATCACATGCATGCCACCGCCGCCTTGCATTGCATGGAACGCGGCAAGCACGTCTATG
TGCAAAAGCCGCTCTGCCGCACGGTCAAAGAAGCCCAGATGCTGATGGATGCCGCCAACAAGTACAAAGTGGCGACCCAG
ATGGGCAATCAGGGCTACTCGAACGAAGGCACGCGCCAGTGCGCGGAGATGATCTGGGGTGGCGAGATCGGCAACGTGAC
CGAAGTCCACGCCTGGACCGATCGCCCGATCTGGCCGCAGGGACTCACCGAGATTCCGACCGAAATGCCGGTCCCCGACA
CGCTAGATTGGGACCTGTGGCTTGGCATCGCCAACATGCGGCCGTTCACCCAGGGCGGCGCCGGTTATCCCAATAATTTC
GGCGGCTACTTCTATCAGCCCTTCAACTGGCGCGGCTTCTACGATTTCGGCTGCGGCGCGCTGGGCGATATGGCCTGCCA
CATCCTGGGCGCTCCCAATATGGCGCTCCGCCTGGGCGCTCCCACCAGCGTCGAGTGCATCAAGAAGGAAGGCGCGAGCC
CCTTCATGTTCCCCAAGGCGTCCACCATCAAGTTCGAATTCCCGGCGCGCGGCAACATGCCTCCGGTGACGATCTACTGG
TACGACGGCATGAAGGTACAGCCCGAGATCAAGGGCGTGCCCGCGGGCGAATACTTAGGTGACCTGCCGCGCATCGGCGG
CGCCGGACGCGGCGCAGGCCGCGGCCAAGGTGCCGCGGGAGCTGCAGGCGCAGCGGGCGGACCGCCGCCGGCTGCTCCGC
CGGCCACCGGCTTCGTCGGCCAGGTCTTCCACTGGAACGACGCCTATCTGCCGGGCGGCGAACGCCAGCGCGTGACGCCG
GACGGCAGCCTCTTCATCGGCGACAAGGGTATGATTACCACCGGGACCTACGGTGAACAGACCCGCCTGCTGCCGGTGGA
GAAGATGCGCGACTACAAGTTCCCCTCGCCGCTCCTGACGCGGTCCCCGGGACACTATCGCGATTGGATCCGCGCCGCCA
AGGGTGGCGATCCCGCCGTTTCCAACTTCAACGTGGCCGCGCCATTCGTCCAATGGATGTTGTTGGGCGTGATCGCGCTG
CGCGTGGAAGGCAAACTGGAGTGGGATGCCGCGAAGGGCCGCTTCAGCAATAACGCCGACGCCAATAAGTACCTCGCTCC
GACCGTGCGCAAGCCCTGGTCGCTCACGTAG

Upstream 100 bases:

>100_bases
GGCGTCCGCACCGCCGCAAACGCTGACCTTTCCGGCTGACAATTCCATACGCACACGAGACCTGCAATTCTGATACGATA
CTGCCGAGGATGTCCCACGT

Downstream 100 bases:

>100_bases
GATACTGGCGCGACTTTGCGGCTTGGCGTCTTTGCGAGAGACAGCAGCTTTCTCGCAGAGCCGCACAGCCGCAAAGTAAC
GCCAAGAAAACCTCTCGGGT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: Oxidoreductase Domain-Containing Protein; NADH-Dependent Dehydrogenase; Oxidoreductase; Dehydrogenase; NADH-Dependent Dyhydrogenase; Dehydrogenase-Like Protein; NADH-Dependent Dihydrogenase; NADH-Dependent Dehydrogenase-Like Protein; NADH-Dependent Deydrogenase; Hydrogenase; Dehydrogenase And Relate Protein; Dehydrogenases Related Protein

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MAFDGISRRHFFYGSLLAGAVPAGGFGSTPSLKGLGYKSPNEKLNIASIGAGGKAASDIHGCAPTENIVALCDVDDKQAA
NIYKQFEKPPKYKDFRKMLDKEGKNIDAVIVTIPDHMHATAALHCMERGKHVYVQKPLCRTVKEAQMLMDAANKYKVATQ
MGNQGYSNEGTRQCAEMIWGGEIGNVTEVHAWTDRPIWPQGLTEIPTEMPVPDTLDWDLWLGIANMRPFTQGGAGYPNNF
GGYFYQPFNWRGFYDFGCGALGDMACHILGAPNMALRLGAPTSVECIKKEGASPFMFPKASTIKFEFPARGNMPPVTIYW
YDGMKVQPEIKGVPAGEYLGDLPRIGGAGRGAGRGQGAAGAAGAAGGPPPAAPPATGFVGQVFHWNDAYLPGGERQRVTP
DGSLFIGDKGMITTGTYGEQTRLLPVEKMRDYKFPSPLLTRSPGHYRDWIRAAKGGDPAVSNFNVAAPFVQWMLLGVIAL
RVEGKLEWDAAKGRFSNNADANKYLAPTVRKPWSLT

Sequences:

>Translated_516_residues
MAFDGISRRHFFYGSLLAGAVPAGGFGSTPSLKGLGYKSPNEKLNIASIGAGGKAASDIHGCAPTENIVALCDVDDKQAA
NIYKQFEKPPKYKDFRKMLDKEGKNIDAVIVTIPDHMHATAALHCMERGKHVYVQKPLCRTVKEAQMLMDAANKYKVATQ
MGNQGYSNEGTRQCAEMIWGGEIGNVTEVHAWTDRPIWPQGLTEIPTEMPVPDTLDWDLWLGIANMRPFTQGGAGYPNNF
GGYFYQPFNWRGFYDFGCGALGDMACHILGAPNMALRLGAPTSVECIKKEGASPFMFPKASTIKFEFPARGNMPPVTIYW
YDGMKVQPEIKGVPAGEYLGDLPRIGGAGRGAGRGQGAAGAAGAAGGPPPAAPPATGFVGQVFHWNDAYLPGGERQRVTP
DGSLFIGDKGMITTGTYGEQTRLLPVEKMRDYKFPSPLLTRSPGHYRDWIRAAKGGDPAVSNFNVAAPFVQWMLLGVIAL
RVEGKLEWDAAKGRFSNNADANKYLAPTVRKPWSLT
>Mature_515_residues
AFDGISRRHFFYGSLLAGAVPAGGFGSTPSLKGLGYKSPNEKLNIASIGAGGKAASDIHGCAPTENIVALCDVDDKQAAN
IYKQFEKPPKYKDFRKMLDKEGKNIDAVIVTIPDHMHATAALHCMERGKHVYVQKPLCRTVKEAQMLMDAANKYKVATQM
GNQGYSNEGTRQCAEMIWGGEIGNVTEVHAWTDRPIWPQGLTEIPTEMPVPDTLDWDLWLGIANMRPFTQGGAGYPNNFG
GYFYQPFNWRGFYDFGCGALGDMACHILGAPNMALRLGAPTSVECIKKEGASPFMFPKASTIKFEFPARGNMPPVTIYWY
DGMKVQPEIKGVPAGEYLGDLPRIGGAGRGAGRGQGAAGAAGAAGGPPPAAPPATGFVGQVFHWNDAYLPGGERQRVTPD
GSLFIGDKGMITTGTYGEQTRLLPVEKMRDYKFPSPLLTRSPGHYRDWIRAAKGGDPAVSNFNVAAPFVQWMLLGVIALR
VEGKLEWDAAKGRFSNNADANKYLAPTVRKPWSLT

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 55890; Mature: 55759

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDGISRRHFFYGSLLAGAVPAGGFGSTPSLKGLGYKSPNEKLNIASIGAGGKAASDIH
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
GCAPTENIVALCDVDDKQAANIYKQFEKPPKYKDFRKMLDKEGKNIDAVIVTIPDHMHAT
CCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHH
AALHCMERGKHVYVQKPLCRTVKEAQMLMDAANKYKVATQMGNQGYSNEGTRQCAEMIWG
HHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCHHHHHHHHHHCC
GEIGNVTEVHAWTDRPIWPQGLTEIPTEMPVPDTLDWDLWLGIANMRPFTQGGAGYPNNF
CCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCC
GGYFYQPFNWRGFYDFGCGALGDMACHILGAPNMALRLGAPTSVECIKKEGASPFMFPKA
CCEEECCCCCCEECCCCCCHHHHHHEEEECCCCEEEEECCCCCHHHHHHCCCCCEECCCC
STIKFEFPARGNMPPVTIYWYDGMKVQPEIKGVPAGEYLGDLPRIGGAGRGAGRGQGAAG
CEEEEECCCCCCCCCEEEEEECCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
AAGAAGGPPPAAPPATGFVGQVFHWNDAYLPGGERQRVTPDGSLFIGDKGMITTGTYGEQ
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCEEECCCCEEEECCCCCC
TRLLPVEKMRDYKFPSPLLTRSPGHYRDWIRAAKGGDPAVSNFNVAAPFVQWMLLGVIAL
EEECCHHHHHCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
RVEGKLEWDAAKGRFSNNADANKYLAPTVRKPWSLT
EECCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure 
AFDGISRRHFFYGSLLAGAVPAGGFGSTPSLKGLGYKSPNEKLNIASIGAGGKAASDIH
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
GCAPTENIVALCDVDDKQAANIYKQFEKPPKYKDFRKMLDKEGKNIDAVIVTIPDHMHAT
CCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHH
AALHCMERGKHVYVQKPLCRTVKEAQMLMDAANKYKVATQMGNQGYSNEGTRQCAEMIWG
HHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCHHHHHHHHHHCC
GEIGNVTEVHAWTDRPIWPQGLTEIPTEMPVPDTLDWDLWLGIANMRPFTQGGAGYPNNF
CCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCC
GGYFYQPFNWRGFYDFGCGALGDMACHILGAPNMALRLGAPTSVECIKKEGASPFMFPKA
CCEEECCCCCCEECCCCCCHHHHHHEEEECCCCEEEEECCCCCHHHHHHCCCCCEECCCC
STIKFEFPARGNMPPVTIYWYDGMKVQPEIKGVPAGEYLGDLPRIGGAGRGAGRGQGAAG
CEEEEECCCCCCCCCEEEEEECCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
AAGAAGGPPPAAPPATGFVGQVFHWNDAYLPGGERQRVTPDGSLFIGDKGMITTGTYGEQ
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCEEECCCCEEEECCCCCC
TRLLPVEKMRDYKFPSPLLTRSPGHYRDWIRAAKGGDPAVSNFNVAAPFVQWMLLGVIAL
EEECCHHHHHCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
RVEGKLEWDAAKGRFSNNADANKYLAPTVRKPWSLT
EECCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA