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The map label for this gene is ccmH [C]

Identifier: 116623324

GI number: 116623324

Start: 5361587

End: 5362054

Strand: Direct

Name: ccmH [C]

Synonym: Acid_4233

Alternate gene names: 116623324

Gene position: 5361587-5362054 (Clockwise)

Preceding gene: 116623323

Following gene: 116623325

Centisome position: 53.8

GC content: 61.75

Gene sequence:

>468_bases
ATGCGACGGTTCAGAAGTAGCATCCTGGCTCTCTTGATCGCGGTGGCGGCGCTGGCACAGACGGCCAGTGAGAAGCCCTC
GGTGGACACCCGCCGGGTGGGCGCGCGCCTGCAATGCCAGTGCGGGTGCAAGGATTCGGTAGCCACCTGCAGCATGCTGG
AGTGCCATTTTTCGAAACCGGCCAAGGAACGCATTGCGCAAATGCAATCGGTGGGTATGAGCGATGAGCAGATTGTCGCC
GCCTTCGTCCGCGACTACGGCAACGGCATTTACCTGGCGCCCCCCAACGCGTTCGGCTGGATCGTGCCCTACGCGGTGGT
GGGAGTCGGGCTGCTGGTGATTCTCGCGGTGCTGCGCAAGGTGATGAAGCCCAAGGTGATGACGGATCTCGGTCCGGTGG
AGATCGACGACCCCGCGCTGGCCAAGTATAAGGATCAGATTGAGAAGGATCTGGCCAATCTCGACTGA

Upstream 100 bases:

>100_bases
GGGACGCTGGTGGTGATTTTCGGGACCCTGATCTGCCTGGTTCCGAGCAAAGTCAAAATGCAATATGCCCGCACGGAAGT
GGTGGGGTACACGAAGAAAA

Downstream 100 bases:

>100_bases
GTGATTTTGTGATTATTGCGATTACCTGCGTCATAGCGATCGTCGTTATCGTGTTCGTCCTCGGGGTTCGTCCCAAGGAT
CTTCCGGAACCGGAACCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRRFRSSILALLIAVAALAQTASEKPSVDTRRVGARLQCQCGCKDSVATCSMLECHFSKPAKERIAQMQSVGMSDEQIVA
AFVRDYGNGIYLAPPNAFGWIVPYAVVGVGLLVILAVLRKVMKPKVMTDLGPVEIDDPALAKYKDQIEKDLANLD

Sequences:

>Translated_155_residues
MRRFRSSILALLIAVAALAQTASEKPSVDTRRVGARLQCQCGCKDSVATCSMLECHFSKPAKERIAQMQSVGMSDEQIVA
AFVRDYGNGIYLAPPNAFGWIVPYAVVGVGLLVILAVLRKVMKPKVMTDLGPVEIDDPALAKYKDQIEKDLANLD
>Mature_155_residues
MRRFRSSILALLIAVAALAQTASEKPSVDTRRVGARLQCQCGCKDSVATCSMLECHFSKPAKERIAQMQSVGMSDEQIVA
AFVRDYGNGIYLAPPNAFGWIVPYAVVGVGLLVILAVLRKVMKPKVMTDLGPVEIDDPALAKYKDQIEKDLANLD

Specific function: May Be Required For The Biogenesis Of C-Type Cytochromes. Possible Subunit Of A Heme Lyase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16869; Mature: 16869

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFRSSILALLIAVAALAQTASEKPSVDTRRVGARLQCQCGCKDSVATCSMLECHFSKP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCH
AKERIAQMQSVGMSDEQIVAAFVRDYGNGIYLAPPNAFGWIVPYAVVGVGLLVILAVLRK
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
VMKPKVMTDLGPVEIDDPALAKYKDQIEKDLANLD
HHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRFRSSILALLIAVAALAQTASEKPSVDTRRVGARLQCQCGCKDSVATCSMLECHFSKP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCH
AKERIAQMQSVGMSDEQIVAAFVRDYGNGIYLAPPNAFGWIVPYAVVGVGLLVILAVLRK
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
VMKPKVMTDLGPVEIDDPALAKYKDQIEKDLANLD
HHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA