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The map label for this gene is secA [C]

Identifier: 116623269

GI number: 116623269

Start: 5295234

End: 5296436

Strand: Direct

Name: secA [C]

Synonym: Acid_4176

Alternate gene names: 116623269

Gene position: 5295234-5296436 (Clockwise)

Preceding gene: 116623268

Following gene: 116623270

Centisome position: 53.13

GC content: 67.41

Gene sequence:

>1203_bases
ATGATTTTCCCTCCAGAATCGATCTACGAACTCCGCCAGGAACTCGCCGCGAAGATGGAATCCGGCCAGCTGACGGAAGC
CGAGGTCTTCCGCCGGGCGCTGGCGGTGGACCCCAGTGACCCCGCCGCCCTGCGCTTCTACGCGTTCATGGCGGAGCAGG
CTGGCGATAAGGAGGCTGCCGAGCGGTACGGCCGGCGCTTCATCCTGGCGAACCCAACCTCCCACGAAGGCTACCTCCTG
CTGGGCCGCGTGCTTTCTGACACGGCGCTGGCGGCCGCCTACCGCGCGCTAGGCGAAGAGAAGCTGCACTTCGACCCCGA
GGCGCGCGTGGACTACGACTTTCCGGACGAACCGCCGTCACGCGAGGGCGAGCCCGAAGCCGTGACCCGCGAACTCGAGC
CTCACCGCCTGCTTCACGAGCTTTTTGCCGCGGGAATCGACTCCGTGGAACCCGCGCTGATCGACCGCATCGTGGCCGCG
GGCGCAGCCTGTTCGCCGCTGCTGTTGGGTGTGCTGAACGCCTGCGGCGAAGACATTCTGCACGAGACCGACGACGCGCT
GGTGGTCCGCGCGCTGGCCCTGCTCGGCGAAATCGGCGACCCGGCGTCCCTGCCCGCACTCGCCAAATTCACCGCGCTTG
AGGACGAGACCCTGGGCGGCGCGGCGCGCTGGGCCTTCCTGCGCATCGCGAACCGCCGGCCGGCGGAGGCGATCGAGGTG
ATCCGGGGCCTGACGGTGGGCGCCGAGGCGCTCGACCTGGCCGGACTCGCCCAGCAACTCTGCCTGATGCCCGATGTCCC
AGGACGCAAAGAAGCGCTGCTGGGCTTGGCAGTCAACCTGCCCGAGCTCGATGACGATGGCCGTGCGCTGCTGGTGGTCA
GCATGATCACGAGCGCCTACGTCATGGAGGGCGCAAACGGCGCGCTGGCGGCGGCGATCGAGGCGGAGCATGGCGCGGCG
CTCAACCGCGAGGCACGTAAGGAGCTGAAGAGCATTCGCGCCGAGATCGACGAGGCTCGGGCATCCTGGGGTACCGACCA
GGAGCCCTCAATCTACGAAGTCGTCTGCGATGCCTTCGAACCGCACGATGAAAACGAGACGGTCGTGCGCCAGGCCCCCA
AGATCGGACGTAACGACCCCTGCTGGTGCGGCAGCGGCAAGAAATACAAGAAGTGCCACCTCGACGCCGATTCGGAACGT
TGA

Upstream 100 bases:

>100_bases
CGGGCAGACCTACGACGTCACCGAAGAGGAAAAGACCCTGGAGATCACACTCAATCCGCCCCAGCAGCAATACTCCGCGC
ATTGATTGCACGGGACGAAC

Downstream 100 bases:

>100_bases
GGTCATCTACAAGTTAGGAGAGACTTATGTTGTGGTTACAGCGCGTGTGCGCATTTGCCGCACTGATCGGCTTCCCCGCC
CTTGCGGCCGACCAGATCGT

Product: SecC motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MIFPPESIYELRQELAAKMESGQLTEAEVFRRALAVDPSDPAALRFYAFMAEQAGDKEAAERYGRRFILANPTSHEGYLL
LGRVLSDTALAAAYRALGEEKLHFDPEARVDYDFPDEPPSREGEPEAVTRELEPHRLLHELFAAGIDSVEPALIDRIVAA
GAACSPLLLGVLNACGEDILHETDDALVVRALALLGEIGDPASLPALAKFTALEDETLGGAARWAFLRIANRRPAEAIEV
IRGLTVGAEALDLAGLAQQLCLMPDVPGRKEALLGLAVNLPELDDDGRALLVVSMITSAYVMEGANGALAAAIEAEHGAA
LNREARKELKSIRAEIDEARASWGTDQEPSIYEVVCDAFEPHDENETVVRQAPKIGRNDPCWCGSGKKYKKCHLDADSER

Sequences:

>Translated_400_residues
MIFPPESIYELRQELAAKMESGQLTEAEVFRRALAVDPSDPAALRFYAFMAEQAGDKEAAERYGRRFILANPTSHEGYLL
LGRVLSDTALAAAYRALGEEKLHFDPEARVDYDFPDEPPSREGEPEAVTRELEPHRLLHELFAAGIDSVEPALIDRIVAA
GAACSPLLLGVLNACGEDILHETDDALVVRALALLGEIGDPASLPALAKFTALEDETLGGAARWAFLRIANRRPAEAIEV
IRGLTVGAEALDLAGLAQQLCLMPDVPGRKEALLGLAVNLPELDDDGRALLVVSMITSAYVMEGANGALAAAIEAEHGAA
LNREARKELKSIRAEIDEARASWGTDQEPSIYEVVCDAFEPHDENETVVRQAPKIGRNDPCWCGSGKKYKKCHLDADSER
>Mature_400_residues
MIFPPESIYELRQELAAKMESGQLTEAEVFRRALAVDPSDPAALRFYAFMAEQAGDKEAAERYGRRFILANPTSHEGYLL
LGRVLSDTALAAAYRALGEEKLHFDPEARVDYDFPDEPPSREGEPEAVTRELEPHRLLHELFAAGIDSVEPALIDRIVAA
GAACSPLLLGVLNACGEDILHETDDALVVRALALLGEIGDPASLPALAKFTALEDETLGGAARWAFLRIANRRPAEAIEV
IRGLTVGAEALDLAGLAQQLCLMPDVPGRKEALLGLAVNLPELDDDGRALLVVSMITSAYVMEGANGALAAAIEAEHGAA
LNREARKELKSIRAEIDEARASWGTDQEPSIYEVVCDAFEPHDENETVVRQAPKIGRNDPCWCGSGKKYKKCHLDADSER

Specific function: Involved In Protein Export. Interacts With The Secy/Sece Subunits. Seca Has A Central Role In Coupling The Hydrolysis Of ATP To The Transfer Of Pre-Secretory Periplasmic And Outer Membrane Proteins Across The Membrane. [C]

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cytoplasm Side Of Plasma Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43372; Mature: 43372

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFPPESIYELRQELAAKMESGQLTEAEVFRRALAVDPSDPAALRFYAFMAEQAGDKEAA
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHH
ERYGRRFILANPTSHEGYLLLGRVLSDTALAAAYRALGEEKLHFDPEARVDYDFPDEPPS
HHHCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
REGEPEAVTRELEPHRLLHELFAAGIDSVEPALIDRIVAAGAACSPLLLGVLNACGEDIL
CCCCHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
HETDDALVVRALALLGEIGDPASLPALAKFTALEDETLGGAARWAFLRIANRRPAEAIEV
HCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHH
IRGLTVGAEALDLAGLAQQLCLMPDVPGRKEALLGLAVNLPELDDDGRALLVVSMITSAY
HHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCEEHHHHHHHHHH
VMEGANGALAAAIEAEHGAALNREARKELKSIRAEIDEARASWGTDQEPSIYEVVCDAFE
HHCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PHDENETVVRQAPKIGRNDPCWCGSGKKYKKCHLDADSER
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MIFPPESIYELRQELAAKMESGQLTEAEVFRRALAVDPSDPAALRFYAFMAEQAGDKEAA
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHH
ERYGRRFILANPTSHEGYLLLGRVLSDTALAAAYRALGEEKLHFDPEARVDYDFPDEPPS
HHHCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
REGEPEAVTRELEPHRLLHELFAAGIDSVEPALIDRIVAAGAACSPLLLGVLNACGEDIL
CCCCHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
HETDDALVVRALALLGEIGDPASLPALAKFTALEDETLGGAARWAFLRIANRRPAEAIEV
HCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHH
IRGLTVGAEALDLAGLAQQLCLMPDVPGRKEALLGLAVNLPELDDDGRALLVVSMITSAY
HHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCEEHHHHHHHHHH
VMEGANGALAAAIEAEHGAALNREARKELKSIRAEIDEARASWGTDQEPSIYEVVCDAFE
HHCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PHDENETVVRQAPKIGRNDPCWCGSGKKYKKCHLDADSER
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA