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The map label for this gene is 116623255

Identifier: 116623255

GI number: 116623255

Start: 5278949

End: 5279365

Strand: Reverse

Name: 116623255

Synonym: Acid_4162

Alternate gene names: NA

Gene position: 5279365-5278949 (Counterclockwise)

Preceding gene: 116623256

Following gene: 116623254

Centisome position: 52.98

GC content: 71.22

Gene sequence:

>417_bases
ATGACCGGAATGACTGTGGCCGCGGTGGTGGGAGTGATCGCGGTGGTCGAAGACCTGCGCCGCCGGCAGGTGCCGAACTG
GCTGACGGCGGCGGGCGTGGCCGTGGGCGTGGCGTGCGCGGCGCCGGGCGGATGGCGCGGCCTGGGTATGGCGGCGGCTG
GGGCAGTCGCGGGATTCCTGCTGCTCGTGCCGTTTCACTGGCTGGGTGCGATGGGCGGCGGCGATGTGAAGCTGATGGCG
GTATACGGTGCGCTATTGGGGCCGGCGGGAATTCTGCTGGCGGCGGTGTTCGCGGGTGTGATCGGCGGAATGTGCGCGGC
CGGCACGCTGCTGCTGCGGCCGCGCACGGCGGCGATTCCGTATGCGCCGGCGATTGTCCTGGGAGCGTGGGTGAGTTTGC
TGGGCGGAGGTTCCTGA

Upstream 100 bases:

>100_bases
ACATCGCTCGAGCGCGAGCCGGGGTGGCATCGCGTGTACGAGGACTCGGTGGCGGTGCTTTACGCGCATGATTCGGGAGG
AACTCCGTGAGAGGCAGACC

Downstream 100 bases:

>100_bases
TGCATATGGATCGGCGATTCGTGATGGTGATGGGCGTGAGCCTGGTTTGGGCGCTGATGGTTTCGGCGGCATTTTTCCGC
CTGGCCGGCGGAGGCGGGCG

Product: peptidase A24A, prepilin type IV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTGMTVAAVVGVIAVVEDLRRRQVPNWLTAAGVAVGVACAAPGGWRGLGMAAAGAVAGFLLLVPFHWLGAMGGGDVKLMA
VYGALLGPAGILLAAVFAGVIGGMCAAGTLLLRPRTAAIPYAPAIVLGAWVSLLGGGS

Sequences:

>Translated_138_residues
MTGMTVAAVVGVIAVVEDLRRRQVPNWLTAAGVAVGVACAAPGGWRGLGMAAAGAVAGFLLLVPFHWLGAMGGGDVKLMA
VYGALLGPAGILLAAVFAGVIGGMCAAGTLLLRPRTAAIPYAPAIVLGAWVSLLGGGS
>Mature_137_residues
TGMTVAAVVGVIAVVEDLRRRQVPNWLTAAGVAVGVACAAPGGWRGLGMAAAGAVAGFLLLVPFHWLGAMGGGDVKLMAV
YGALLGPAGILLAAVFAGVIGGMCAAGTLLLRPRTAAIPYAPAIVLGAWVSLLGGGS

Specific function: Unknown

COG id: COG4960

COG function: function code OU; Flp pilus assembly protein, protease CpaA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13491; Mature: 13360

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGMTVAAVVGVIAVVEDLRRRQVPNWLTAAGVAVGVACAAPGGWRGLGMAAAGAVAGFL
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLVPFHWLGAMGGGDVKLMAVYGALLGPAGILLAAVFAGVIGGMCAAGTLLLRPRTAAIP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCC
YAPAIVLGAWVSLLGGGS
CHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGMTVAAVVGVIAVVEDLRRRQVPNWLTAAGVAVGVACAAPGGWRGLGMAAAGAVAGFL
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLVPFHWLGAMGGGDVKLMAVYGALLGPAGILLAAVFAGVIGGMCAAGTLLLRPRTAAIP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCC
YAPAIVLGAWVSLLGGGS
CHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA