Click here to switch to the map view.

The map label for this gene is 116623229

Identifier: 116623229

GI number: 116623229

Start: 5249029

End: 5249862

Strand: Reverse

Name: 116623229

Synonym: Acid_4136

Alternate gene names: NA

Gene position: 5249862-5249029 (Counterclockwise)

Preceding gene: 116623230

Following gene: 116623228

Centisome position: 52.68

GC content: 63.91

Gene sequence:

>834_bases
ATGAAGCTGCAAATCGTTCATGACCGGGAAGGCAACATTCACGCGGTGGGCCACGCCCCTGGTGCTGTGGGAGGCGCGCA
GCCTCAGTTGCACGTTGCCGAGGGCATGGTTTCGAGCACCATCGACGCTCCCGAGGTGCAGAATCTCGAAGACCCGGCCG
CGCTCGAACAGATCGCCAAACGATATCGCGTGCAAGGCGAGGGCGATAATGCCCGGCTCTCGCCGCATGGGGGCGGTTCA
CTGACGCTGCCGCAGAAGGACCTGAGGAAGAACACGGCGGCGCTTTTCGAAGGACTGCAGCATGACGAGAAGGCCCGCCA
AAAGTTCATGACTAACCCCGTCGGCCAGGTGGCGAAACTGGTGGTCGGCCGCGAACTGGCGCCGCAGCAGGAGTCGGCGG
CCAACCGGGTGCTGTTCGCGATGCTGGCGAACCGCGAGTTCATGAAATGGCTCGACGAGTATCGCGGTCCCGGCGGCAAG
CCGGCAACGCGTGAGCAATTCGGACGGGATTTCGCGCAGGCAGTGGTCCGTTTTGGGGACCAGGATCTGTTTAAGGCCGT
GGTCGGCCAAGCGGCGGCAGGGCTCGGCTTCCCGGGCGAAGTAGCGCAGCAACTCGTAACCGGGCCGGAGAAGAGCGTGG
CCACTCCGGCTGCGACTCCTTCCACGTCCGACCAGACGGCGCACTCCAGTTCGAACGCCAACAGCGTGGCATTCGGCGAC
CCGGCCGTGGTGGACCCTGCGTTCATGCGCTCGATCATTCAGCAGTTGATGGATCGCGCACAACAGTTGAAGCAGCAGGG
AGAACTCGGCAACATGGACGCGGCCATCCGCTGA

Upstream 100 bases:

>100_bases
GGCACGCGGCAGGTGAACGTGCACGTTCGAAACATCGGGAACACACCCTTGACTTACGCGATATGGGTCGCGCAGGTGGG
GCCGTAAGGAGGTAAGGAAA

Downstream 100 bases:

>100_bases
GGTGGTGGATATGGCAGGGAAAGATCCACTCCTCCTTCGCAGTGAAAATCTCCGCCTCAACACTGCCCGTCTTTTCGATC
GCCTCAACACCGATCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKLQIVHDREGNIHAVGHAPGAVGGAQPQLHVAEGMVSSTIDAPEVQNLEDPAALEQIAKRYRVQGEGDNARLSPHGGGS
LTLPQKDLRKNTAALFEGLQHDEKARQKFMTNPVGQVAKLVVGRELAPQQESAANRVLFAMLANREFMKWLDEYRGPGGK
PATREQFGRDFAQAVVRFGDQDLFKAVVGQAAAGLGFPGEVAQQLVTGPEKSVATPAATPSTSDQTAHSSSNANSVAFGD
PAVVDPAFMRSIIQQLMDRAQQLKQQGELGNMDAAIR

Sequences:

>Translated_277_residues
MKLQIVHDREGNIHAVGHAPGAVGGAQPQLHVAEGMVSSTIDAPEVQNLEDPAALEQIAKRYRVQGEGDNARLSPHGGGS
LTLPQKDLRKNTAALFEGLQHDEKARQKFMTNPVGQVAKLVVGRELAPQQESAANRVLFAMLANREFMKWLDEYRGPGGK
PATREQFGRDFAQAVVRFGDQDLFKAVVGQAAAGLGFPGEVAQQLVTGPEKSVATPAATPSTSDQTAHSSSNANSVAFGD
PAVVDPAFMRSIIQQLMDRAQQLKQQGELGNMDAAIR
>Mature_277_residues
MKLQIVHDREGNIHAVGHAPGAVGGAQPQLHVAEGMVSSTIDAPEVQNLEDPAALEQIAKRYRVQGEGDNARLSPHGGGS
LTLPQKDLRKNTAALFEGLQHDEKARQKFMTNPVGQVAKLVVGRELAPQQESAANRVLFAMLANREFMKWLDEYRGPGGK
PATREQFGRDFAQAVVRFGDQDLFKAVVGQAAAGLGFPGEVAQQLVTGPEKSVATPAATPSTSDQTAHSSSNANSVAFGD
PAVVDPAFMRSIIQQLMDRAQQLKQQGELGNMDAAIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29621; Mature: 29621

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQIVHDREGNIHAVGHAPGAVGGAQPQLHVAEGMVSSTIDAPEVQNLEDPAALEQIAK
CCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
RYRVQGEGDNARLSPHGGGSLTLPQKDLRKNTAALFEGLQHDEKARQKFMTNPVGQVAKL
HHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VVGRELAPQQESAANRVLFAMLANREFMKWLDEYRGPGGKPATREQFGRDFAQAVVRFGD
HHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
QDLFKAVVGQAAAGLGFPGEVAQQLVTGPEKSVATPAATPSTSDQTAHSSSNANSVAFGD
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCHHHCCCCCCCCEECCC
PAVVDPAFMRSIIQQLMDRAQQLKQQGELGNMDAAIR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC
>Mature Secondary Structure
MKLQIVHDREGNIHAVGHAPGAVGGAQPQLHVAEGMVSSTIDAPEVQNLEDPAALEQIAK
CCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
RYRVQGEGDNARLSPHGGGSLTLPQKDLRKNTAALFEGLQHDEKARQKFMTNPVGQVAKL
HHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VVGRELAPQQESAANRVLFAMLANREFMKWLDEYRGPGGKPATREQFGRDFAQAVVRFGD
HHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
QDLFKAVVGQAAAGLGFPGEVAQQLVTGPEKSVATPAATPSTSDQTAHSSSNANSVAFGD
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCHHHCCCCCCCCEECCC
PAVVDPAFMRSIIQQLMDRAQQLKQQGELGNMDAAIR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA