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The map label for this gene is 116623227

Identifier: 116623227

GI number: 116623227

Start: 5247317

End: 5248405

Strand: Reverse

Name: 116623227

Synonym: Acid_4134

Alternate gene names: NA

Gene position: 5248405-5247317 (Counterclockwise)

Preceding gene: 116623228

Following gene: 116623226

Centisome position: 52.67

GC content: 64.0

Gene sequence:

>1089_bases
ATGGAAAGCACCCGCAGGGACCGCCGCGGCGGTGTCACTTCCGCCTTGAAGACGCTCTCGATCATGCCCACCTTCACCTG
TCCGGCGGCATGCGCCGACTGCGCGTCGCTGAGCAGCCCGCGGGATCGCACCAACGTGCGGCAGGAAGCCGTGCTGGCGG
CGATCCGCGAGGCGCGCGAGTTGGGCTTCTACAACGTTGTGTTTACCGGCGGCGAAGCGACGCTGCGCTGGAAGGATCTG
CTCGAGGGGATTCGTTTGGCGCGGTCGCTCGATTTCCCGGTGCGGCTGGTCACCAACGCCCATTGGGCGCACGATCCCGA
ACGGGCCACTCAAGGTATCGGCGAGTTGCTCGAAGCGGGGCTGACGGAAATCAACTACAGTACCGGAGACGAGCACGCCC
GCTTCATACCGGTGGAGCGGGTGTTGCACGCGATCGCGGCGGCGACGGCTCGCGGTTTGCACGTCGTGGTGGTGGTGGAG
TTGCGAGCCGAACGGCTTGTCACTCGGGCGGCACTGGAAGGCCATCCTTTGTATGCGTTACTGAGCAGTGGGCAGAAAGA
GAAGATTAGAGTCCTGGAGAGTCCGTGGATGCCGCTCGAGCCCTATACGGTCGAGCGTTATCCCGAAGGTGTTGCGATAG
ACAGGCGCAACCTCGCATGGCGCCCGGGCTGCGACAACCTGATGCAGACTTACACGCTGCAGGCGGATGGCCGGATCGGC
TGCTGCTGCGGGATCGGCATGCGCCGGATCGATGAGCTGAACGTCGGCAATGTGAGCGACGATCGTCCGCTGCACCGGGC
GATCGAGGAGGCGGAGAACGATTTTCTGAAACTCTGGATCCGCTGGAAAGGTCCCGAGCGCGTGCTGGCGTGGGCCGCTT
CGATCGATCCCGCGATCCGTTGGGAGGGCATGTATGCCCACCACTGCCAGGCCTGCGCGCGTGTATACCGCGACCCGCGG
GTGGCAGCGGTGATCCGCGAGCATTACGAGTCGGTGATGGCAGATGTCATTCAGAGCGGGTGGATGGACGAAGAGTTCGT
GCCTGGAGTGTTGCAGCAGCCGCTGGTGCAGATTGAAGAGCCGGCATGA

Upstream 100 bases:

>100_bases
CGTTCGATCGTGGATCAACTGATTAAGTACGCGGAGGAGTTGAAGCAGCAAGGGCGGCTGGGAGACCTGGGCCAAGCCAT
CCGCTGAGCGGAGGACGGAT

Downstream 100 bases:

>100_bases
TGCAACGGTGCGTCGCGCTTTGCGGCGCCAAGCTGCTGAGGATGGTTTCGGCGACGACGAACCGTCGTTGCCGGCTTTGC
GCGACTTCGATTTAGTGCCG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Metallo Cofactor Biosynthesis Protein Conjectural; Radical SAM Family Protein

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MESTRRDRRGGVTSALKTLSIMPTFTCPAACADCASLSSPRDRTNVRQEAVLAAIREARELGFYNVVFTGGEATLRWKDL
LEGIRLARSLDFPVRLVTNAHWAHDPERATQGIGELLEAGLTEINYSTGDEHARFIPVERVLHAIAAATARGLHVVVVVE
LRAERLVTRAALEGHPLYALLSSGQKEKIRVLESPWMPLEPYTVERYPEGVAIDRRNLAWRPGCDNLMQTYTLQADGRIG
CCCGIGMRRIDELNVGNVSDDRPLHRAIEEAENDFLKLWIRWKGPERVLAWAASIDPAIRWEGMYAHHCQACARVYRDPR
VAAVIREHYESVMADVIQSGWMDEEFVPGVLQQPLVQIEEPA

Sequences:

>Translated_362_residues
MESTRRDRRGGVTSALKTLSIMPTFTCPAACADCASLSSPRDRTNVRQEAVLAAIREARELGFYNVVFTGGEATLRWKDL
LEGIRLARSLDFPVRLVTNAHWAHDPERATQGIGELLEAGLTEINYSTGDEHARFIPVERVLHAIAAATARGLHVVVVVE
LRAERLVTRAALEGHPLYALLSSGQKEKIRVLESPWMPLEPYTVERYPEGVAIDRRNLAWRPGCDNLMQTYTLQADGRIG
CCCGIGMRRIDELNVGNVSDDRPLHRAIEEAENDFLKLWIRWKGPERVLAWAASIDPAIRWEGMYAHHCQACARVYRDPR
VAAVIREHYESVMADVIQSGWMDEEFVPGVLQQPLVQIEEPA
>Mature_362_residues
MESTRRDRRGGVTSALKTLSIMPTFTCPAACADCASLSSPRDRTNVRQEAVLAAIREARELGFYNVVFTGGEATLRWKDL
LEGIRLARSLDFPVRLVTNAHWAHDPERATQGIGELLEAGLTEINYSTGDEHARFIPVERVLHAIAAATARGLHVVVVVE
LRAERLVTRAALEGHPLYALLSSGQKEKIRVLESPWMPLEPYTVERYPEGVAIDRRNLAWRPGCDNLMQTYTLQADGRIG
CCCGIGMRRIDELNVGNVSDDRPLHRAIEEAENDFLKLWIRWKGPERVLAWAASIDPAIRWEGMYAHHCQACARVYRDPR
VAAVIREHYESVMADVIQSGWMDEEFVPGVLQQPLVQIEEPA

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40628; Mature: 40628

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTRRDRRGGVTSALKTLSIMPTFTCPAACADCASLSSPRDRTNVRQEAVLAAIREARE
CCCCCCHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LGFYNVVFTGGEATLRWKDLLEGIRLARSLDFPVRLVTNAHWAHDPERATQGIGELLEAG
CCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
LTEINYSTGDEHARFIPVERVLHAIAAATARGLHVVVVVELRAERLVTRAALEGHPLYAL
HHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHCCCCHHHH
LSSGQKEKIRVLESPWMPLEPYTVERYPEGVAIDRRNLAWRPGCDNLMQTYTLQADGRIG
HCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHEEEECCCCEE
CCCGIGMRRIDELNVGNVSDDRPLHRAIEEAENDFLKLWIRWKGPERVLAWAASIDPAIR
EEECCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHCCCCCE
WEGMYAHHCQACARVYRDPRVAAVIREHYESVMADVIQSGWMDEEFVPGVLQQPLVQIEE
ECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
PA
CC
>Mature Secondary Structure
MESTRRDRRGGVTSALKTLSIMPTFTCPAACADCASLSSPRDRTNVRQEAVLAAIREARE
CCCCCCHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LGFYNVVFTGGEATLRWKDLLEGIRLARSLDFPVRLVTNAHWAHDPERATQGIGELLEAG
CCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
LTEINYSTGDEHARFIPVERVLHAIAAATARGLHVVVVVELRAERLVTRAALEGHPLYAL
HHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHCCCCHHHH
LSSGQKEKIRVLESPWMPLEPYTVERYPEGVAIDRRNLAWRPGCDNLMQTYTLQADGRIG
HCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHEEEECCCCEE
CCCGIGMRRIDELNVGNVSDDRPLHRAIEEAENDFLKLWIRWKGPERVLAWAASIDPAIR
EEECCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHCCCCCE
WEGMYAHHCQACARVYRDPRVAAVIREHYESVMADVIQSGWMDEEFVPGVLQQPLVQIEE
ECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
PA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA