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The map label for this gene is 116623172

Identifier: 116623172

GI number: 116623172

Start: 5184232

End: 5186592

Strand: Reverse

Name: 116623172

Synonym: Acid_4079

Alternate gene names: NA

Gene position: 5186592-5184232 (Counterclockwise)

Preceding gene: 116623173

Following gene: 116623171

Centisome position: 52.04

GC content: 65.82

Gene sequence:

>2361_bases
ATGGTAAGGCGCGGACCACTGATCGTGTTAGCCGGCGCCGCGGCTTGTGCCGCTGGCGCCGGTCTCCTTTGGTCCCACTA
CACCGCCGATATTCCGTCACTGTCATCACCGCCCGCGTTAGCAGGCTCCGGGTCCTGTCAGGGTTGCCACCCGAAGTTCT
ACGAACTGTGGTCCACGTCGCACCACGGACTCGCCATGCAACCGGTCTCCGCGGACTTCGTGCGACGCAATCTCAATCTC
ACGCAGGCGCCCGTCCGCGTGGGCCAGGCCACCTACGCGCCCGAAGTGGATGCCAAATCCGCCTGGCTCGTCGAGCGCTC
GCCCCAAGGCACACGCCGCTATCCGCTGGAGCAGGCGATGGGCGGCAAGAACGTCTACTACTTCCTGACCACCCTGGAGC
GCGGCCACATGCAGGTCCTCCCGCTCTCTTATGACGTGAACCAAAGGCAGTGGATCGATGCCGCGGGCAACATGGTCATG
CACGAATCCGGTCCCTCCACGGCTCCGGCCGACTGGCGCGATCGCACGCTCACCTTCAACACTTCGTGCTACGGCTGCCA
CGTCAGCCAGCTCGCCACCAACTACGACGCCGCCTCCGATAGCTACCGCACCCAGTGGCGCGAGGCCGGCATCAATTGTG
AAACCTGCCACGGCCCTTCCGCCGAACACGTCCGCCTCATGCGGCAGGCGCAGAGGGAGAAGCGCGATCGCCCTCCTGAC
GATTTGAAGATCGTCAGCGTCAAGAACCTCACCAAGGTCCAGCGCAATGATCTCTGCGCGTCCTGCCACGCCAAGCTGAT
GGCCTATACTCCGGGCTTCAAACCCGGCGACCGCTTCTTCGATTACTACAACGTTGCCGCTTTCGAGAGCGACGATTTCT
TCCCCGATGGCCGCGACTACCGCGAGAACTACACCTTCACGTCATGGTCGATGAGCCCGTGCGCGCGCACCAGCGATCTG
GATTGCCTGCACTGCCACACCTCCAGCGGCCGCTACCGCTTCAAGGAAGATAAGCTCGCCAACAACGCCTGCATGCCCTG
CCATGAGGAGCGGGTCAAGAATGTCGCAGCCCATACCCACCACAAACCGGATAGCGCGGGCAGCCGCTGCACCTCCTGCC
ACATGCCTTCGACCGGGTATGCCCGCATGGTCCGCAGCGATCACTCCATGCGCCCGCCCACGCCCGCGACCACTCTTGCC
TACAAATCTCCCAACGCCTGCAATGCATGCCATGCCGATCGCGACGCAGGCTGGGCCGATAAGCAGGTTCGCAAGTGGTA
TAAGCGCGACTACCAGGCGCCCGTGCTGGCGCAGGCTTCTCTCATTTCGTCGGCCCGCAATCGCTACTGGACGCGGCTTC
CCGCGATGCTCGCGGCACTCCAGCGTCCGGGCCGTGAACCGGTCTTCACGGCCTCCCTGATCCGTCTGCTAGGCGCCTGT
CCTGACCGCCAGATCATTCCCCTGTTCGCCGTCGCGCTCGAAGATCCGTCGCCTCTCGTCCGCTCCGCCGCCGCCGAGGC
GCTGTCCCAGAATCCGAGTCCGCTCGCCACCGTCGCCCTCCTCCGCGCCGCGAAAGACAACTTCCGCATGGTGCGCATCC
AGGCCGGCGTGGCCCTCTCCAGATTCCAGACCGCCGGCGTGGAGCCCTCCGTTCGCGAAGCCGTAGATCGCGCTGTCGGC
GAATATGTAGCGTCGCTCGAAGCGCGCCCGGACGATTTCCGACGCCGTCTCAACCTCGGTGTCCTGCGCTTCGATCGCGG
CCAATACCAGCAATCCATCGCCGAGTACCAGGCCGCCATCCGGCTGCGCCCCGATGCCGCGCAACCCCTGGTCAACGAGT
CGCTCGCCTACAACCGCCTGGGTGAAAACGATCGCGCGGAAGAGGCGCTCCACCAGGCGCTGCGGCTCGATCCGCGCAAC
AGTTCCGCCTACTTGAATCTCGGGCTGCTGATGGCCGAGAAGCGGCGCATTCCGGATGCCGAGGCGGCCCTGCGCGGAGC
TCTCGATACCGATCCGGACAACGCCGCGGCCGCCTTTAACCTTGCCGTGATCGTCTCCGGCAGCCGCGCGAACGAGGCCA
TTGACCTCTGCCGCCGCGCCGTAAAAGCGGCTCCCGGCGAGCCCAAGTACGTCTACACCCTCGCGTTCTATCTCGCGCAA
TCCGGCGACACTCCGGGCGCCGCGGCCGCACTCCGCCGGGCAATCTCCGCCGGCGTTGCCAACACGCAATGTTACCGCGC
TCTGATGCGGATCTATCTGCAGCAGGGCCAGCCCCGGGAGGCTCTCGCGCTCTCCCGCCAGGCCGCCGCCGACCCGGCGC
TCCCCGAGCGCGACCGCGCCTCGTTCCTGGCCAACCGATGA

Upstream 100 bases:

>100_bases
GCCTGCAGCCGGCTTTCAGCCGGCTTTCCCGGGGCTGGGCGCGACAACAAAAAAGAAATCAAACCTGCTCCCACAGAGTC
GATTCTCTCGGAAGCTCGAT

Downstream 100 bases:

>100_bases
GAGATCCCGTCATGAAACTCACGGCCACGCTGGCGCTGTGCGCCTCCCTGATTCAGGCGCAAAAGGCCGTCCTCCCGTCC
TGGAATGACGGTCCCGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C Family Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; C-Type Cytochrome; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Doubled CXXCH Domain Protein; Tetratricopeptide Repeat Family; FOG TPR Repeat; Peptidase S1 And S6 Chymotrypsin/Hap; Signal Peptide; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Doubled CXXCH Domain-Containing Protein; Protein Kinase; Deca-Heme C-Type Cytochrome; Cytochrome C

Number of amino acids: Translated: 786; Mature: 786

Protein sequence:

>786_residues
MVRRGPLIVLAGAAACAAGAGLLWSHYTADIPSLSSPPALAGSGSCQGCHPKFYELWSTSHHGLAMQPVSADFVRRNLNL
TQAPVRVGQATYAPEVDAKSAWLVERSPQGTRRYPLEQAMGGKNVYYFLTTLERGHMQVLPLSYDVNQRQWIDAAGNMVM
HESGPSTAPADWRDRTLTFNTSCYGCHVSQLATNYDAASDSYRTQWREAGINCETCHGPSAEHVRLMRQAQREKRDRPPD
DLKIVSVKNLTKVQRNDLCASCHAKLMAYTPGFKPGDRFFDYYNVAAFESDDFFPDGRDYRENYTFTSWSMSPCARTSDL
DCLHCHTSSGRYRFKEDKLANNACMPCHEERVKNVAAHTHHKPDSAGSRCTSCHMPSTGYARMVRSDHSMRPPTPATTLA
YKSPNACNACHADRDAGWADKQVRKWYKRDYQAPVLAQASLISSARNRYWTRLPAMLAALQRPGREPVFTASLIRLLGAC
PDRQIIPLFAVALEDPSPLVRSAAAEALSQNPSPLATVALLRAAKDNFRMVRIQAGVALSRFQTAGVEPSVREAVDRAVG
EYVASLEARPDDFRRRLNLGVLRFDRGQYQQSIAEYQAAIRLRPDAAQPLVNESLAYNRLGENDRAEEALHQALRLDPRN
SSAYLNLGLLMAEKRRIPDAEAALRGALDTDPDNAAAAFNLAVIVSGSRANEAIDLCRRAVKAAPGEPKYVYTLAFYLAQ
SGDTPGAAAALRRAISAGVANTQCYRALMRIYLQQGQPREALALSRQAAADPALPERDRASFLANR

Sequences:

>Translated_786_residues
MVRRGPLIVLAGAAACAAGAGLLWSHYTADIPSLSSPPALAGSGSCQGCHPKFYELWSTSHHGLAMQPVSADFVRRNLNL
TQAPVRVGQATYAPEVDAKSAWLVERSPQGTRRYPLEQAMGGKNVYYFLTTLERGHMQVLPLSYDVNQRQWIDAAGNMVM
HESGPSTAPADWRDRTLTFNTSCYGCHVSQLATNYDAASDSYRTQWREAGINCETCHGPSAEHVRLMRQAQREKRDRPPD
DLKIVSVKNLTKVQRNDLCASCHAKLMAYTPGFKPGDRFFDYYNVAAFESDDFFPDGRDYRENYTFTSWSMSPCARTSDL
DCLHCHTSSGRYRFKEDKLANNACMPCHEERVKNVAAHTHHKPDSAGSRCTSCHMPSTGYARMVRSDHSMRPPTPATTLA
YKSPNACNACHADRDAGWADKQVRKWYKRDYQAPVLAQASLISSARNRYWTRLPAMLAALQRPGREPVFTASLIRLLGAC
PDRQIIPLFAVALEDPSPLVRSAAAEALSQNPSPLATVALLRAAKDNFRMVRIQAGVALSRFQTAGVEPSVREAVDRAVG
EYVASLEARPDDFRRRLNLGVLRFDRGQYQQSIAEYQAAIRLRPDAAQPLVNESLAYNRLGENDRAEEALHQALRLDPRN
SSAYLNLGLLMAEKRRIPDAEAALRGALDTDPDNAAAAFNLAVIVSGSRANEAIDLCRRAVKAAPGEPKYVYTLAFYLAQ
SGDTPGAAAALRRAISAGVANTQCYRALMRIYLQQGQPREALALSRQAAADPALPERDRASFLANR
>Mature_786_residues
MVRRGPLIVLAGAAACAAGAGLLWSHYTADIPSLSSPPALAGSGSCQGCHPKFYELWSTSHHGLAMQPVSADFVRRNLNL
TQAPVRVGQATYAPEVDAKSAWLVERSPQGTRRYPLEQAMGGKNVYYFLTTLERGHMQVLPLSYDVNQRQWIDAAGNMVM
HESGPSTAPADWRDRTLTFNTSCYGCHVSQLATNYDAASDSYRTQWREAGINCETCHGPSAEHVRLMRQAQREKRDRPPD
DLKIVSVKNLTKVQRNDLCASCHAKLMAYTPGFKPGDRFFDYYNVAAFESDDFFPDGRDYRENYTFTSWSMSPCARTSDL
DCLHCHTSSGRYRFKEDKLANNACMPCHEERVKNVAAHTHHKPDSAGSRCTSCHMPSTGYARMVRSDHSMRPPTPATTLA
YKSPNACNACHADRDAGWADKQVRKWYKRDYQAPVLAQASLISSARNRYWTRLPAMLAALQRPGREPVFTASLIRLLGAC
PDRQIIPLFAVALEDPSPLVRSAAAEALSQNPSPLATVALLRAAKDNFRMVRIQAGVALSRFQTAGVEPSVREAVDRAVG
EYVASLEARPDDFRRRLNLGVLRFDRGQYQQSIAEYQAAIRLRPDAAQPLVNESLAYNRLGENDRAEEALHQALRLDPRN
SSAYLNLGLLMAEKRRIPDAEAALRGALDTDPDNAAAAFNLAVIVSGSRANEAIDLCRRAVKAAPGEPKYVYTLAFYLAQ
SGDTPGAAAALRRAISAGVANTQCYRALMRIYLQQGQPREALALSRQAAADPALPERDRASFLANR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=215, Percent_Identity=31.6279069767442, Blast_Score=80, Evalue=8e-15,
Organism=Homo sapiens, GI32307148, Length=215, Percent_Identity=31.6279069767442, Blast_Score=80, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI115532692, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=208, Percent_Identity=28.8461538461538, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17647755, Length=266, Percent_Identity=30.0751879699248, Blast_Score=80, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24585827, Length=266, Percent_Identity=30.0751879699248, Blast_Score=80, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24585829, Length=266, Percent_Identity=30.0751879699248, Blast_Score=80, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86800; Mature: 86800

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50077 HEAT_REPEAT ; PS50005 TPR ; PS50293 TPR_REGION ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRGPLIVLAGAAACAAGAGLLWSHYTADIPSLSSPPALAGSGSCQGCHPKFYELWSTS
CCCCCCEEEEECCHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
HHGLAMQPVSADFVRRNLNLTQAPVRVGQATYAPEVDAKSAWLVERSPQGTRRYPLEQAM
CCCEEECCCCHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHC
GGKNVYYFLTTLERGHMQVLPLSYDVNQRQWIDAAGNMVMHESGPSTAPADWRDRTLTFN
CCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEC
TSCYGCHVSQLATNYDAASDSYRTQWREAGINCETCHGPSAEHVRLMRQAQREKRDRPPD
CCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
DLKIVSVKNLTKVQRNDLCASCHAKLMAYTPGFKPGDRFFDYYNVAAFESDDFFPDGRDY
CEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHEEEEECCCCCCCCCCCH
RENYTFTSWSMSPCARTSDLDCLHCHTSSGRYRFKEDKLANNACMPCHEERVKNVAAHTH
HCCCCEEECCCCCCCCCCCCCEEEEECCCCCEEECHHHCCCCCCCCCHHHHHHHHHHHCC
HKPDSAGSRCTSCHMPSTGYARMVRSDHSMRPPTPATTLAYKSPNACNACHADRDAGWAD
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCH
KQVRKWYKRDYQAPVLAQASLISSARNRYWTRLPAMLAALQRPGREPVFTASLIRLLGAC
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDRQIIPLFAVALEDPSPLVRSAAAEALSQNPSPLATVALLRAAKDNFRMVRIQAGVALS
CCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHHH
RFQTAGVEPSVREAVDRAVGEYVASLEARPDDFRRRLNLGVLRFDRGQYQQSIAEYQAAI
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHE
RLRPDAAQPLVNESLAYNRLGENDRAEEALHQALRLDPRNSSAYLNLGLLMAEKRRIPDA
EECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEHEEEHHHHCCCCH
EAALRGALDTDPDNAAAAFNLAVIVSGSRANEAIDLCRRAVKAAPGEPKYVYTLAFYLAQ
HHHHHCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH
SGDTPGAAAALRRAISAGVANTQCYRALMRIYLQQGQPREALALSRQAAADPALPERDRA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHH
SFLANR
HHHCCC
>Mature Secondary Structure
MVRRGPLIVLAGAAACAAGAGLLWSHYTADIPSLSSPPALAGSGSCQGCHPKFYELWSTS
CCCCCCEEEEECCHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
HHGLAMQPVSADFVRRNLNLTQAPVRVGQATYAPEVDAKSAWLVERSPQGTRRYPLEQAM
CCCEEECCCCHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHC
GGKNVYYFLTTLERGHMQVLPLSYDVNQRQWIDAAGNMVMHESGPSTAPADWRDRTLTFN
CCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEC
TSCYGCHVSQLATNYDAASDSYRTQWREAGINCETCHGPSAEHVRLMRQAQREKRDRPPD
CCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
DLKIVSVKNLTKVQRNDLCASCHAKLMAYTPGFKPGDRFFDYYNVAAFESDDFFPDGRDY
CEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHEEEEECCCCCCCCCCCH
RENYTFTSWSMSPCARTSDLDCLHCHTSSGRYRFKEDKLANNACMPCHEERVKNVAAHTH
HCCCCEEECCCCCCCCCCCCCEEEEECCCCCEEECHHHCCCCCCCCCHHHHHHHHHHHCC
HKPDSAGSRCTSCHMPSTGYARMVRSDHSMRPPTPATTLAYKSPNACNACHADRDAGWAD
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCH
KQVRKWYKRDYQAPVLAQASLISSARNRYWTRLPAMLAALQRPGREPVFTASLIRLLGAC
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDRQIIPLFAVALEDPSPLVRSAAAEALSQNPSPLATVALLRAAKDNFRMVRIQAGVALS
CCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHHH
RFQTAGVEPSVREAVDRAVGEYVASLEARPDDFRRRLNLGVLRFDRGQYQQSIAEYQAAI
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHE
RLRPDAAQPLVNESLAYNRLGENDRAEEALHQALRLDPRNSSAYLNLGLLMAEKRRIPDA
EECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEHEEEHHHHCCCCH
EAALRGALDTDPDNAAAAFNLAVIVSGSRANEAIDLCRRAVKAAPGEPKYVYTLAFYLAQ
HHHHHCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH
SGDTPGAAAALRRAISAGVANTQCYRALMRIYLQQGQPREALALSRQAAADPALPERDRA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHH
SFLANR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA