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The map label for this gene is 116623140

Identifier: 116623140

GI number: 116623140

Start: 5133088

End: 5134023

Strand: Direct

Name: 116623140

Synonym: Acid_4046

Alternate gene names: NA

Gene position: 5133088-5134023 (Clockwise)

Preceding gene: 116623138

Following gene: 116623141

Centisome position: 51.51

GC content: 64.85

Gene sequence:

>936_bases
GTGCTTCGATATTTTCGGTTCCTGATCTTCGCGGCGGCCGCCTACGGGCAGGTCTACGAGTTCACCGGGCAGATCACGCC
AGCCGGGCGCGGGTCCGTGAGCTTGTACGGCGCGACCCAACCGTTCACCGCGTCTACCCTTACCGATGACGGCGGGCGCT
TCGCATTTCGCAAACTCGACGCGGGCACCTACACTTTGTCGGTGTACCTGCCGGGGCGCGGAGAGGCGCGGCAGACAATC
GAGATCGGACCCGGTACGGCCGATTCGCGGCGCCGCGTTCACCTTTCGCTCGCGCTCAGAGAGGGCGACTTCGACCCGAC
CACGGATCGGCGCCGCCACGCCGTCTCGGCCCGACAGCTCACGATCCCGGAGCGCGCCGTCCGCGATTATGAGGACTCTC
AGCACGACCTGGAGAAGCGGGATGTGGAGTCCGCGGAGAAGCGACTGGAGCACGCCGTCGAACTGGCGCCGCAGTTCGAG
AACGCCTGGAATACGCTGGGCACCATCGCTTACCAGACGCGACGGTTCACGCTCGCCGAGCAGCGCTTCCGCGAGGCCCT
GAAGCAGGACCCGACGGCATACGAGCCGCTGGTCAACCTTGGCGGAGTGCTGGTGACGCTGCACAAGCTGGATGAGGCGC
TCGAGGTCAACGTCCACGCGGCCCTGACGCGCCCCGGCGATGCACTCGCCGAATCGCAGCTTGGCATGACGTACTTCGAG
CTCGGACAGTTTGACAATGCCGTCAAGCATCTGGAGCGCGCACGGAAGCTCGACCCGGCGCACTTCTCCCATCCTCAGCT
CTATTTGGCTGAGATCCATTTGCGGCGCGGGGAAAAGGCGGCAGCAGCCGATGTGCTGGAGGATTTTCTGCTGCATCACC
CGGATTATCCGCAGGCCGACAAGGTGCGTGAGAATATCGGAGAGTTGCGGCGCTGA

Upstream 100 bases:

>100_bases
CGCCATTCCTTCCCGGACAGCGAGGTCCGGACAACACCTACCGTGGTGACCATCGAGCCATTCTATACCGCTTGCAGCAG
GGCGGTAAGATCGAAGTGCG

Downstream 100 bases:

>100_bases
GGGGAGAAGTTGCCTGAAAGGCGGCTGCACGGTCGAAAGCCTCCACGGCGAACAACGGAATACTCCTCGAAAAGCGCGGC
GTAGCTGACGCGCAATTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MLRYFRFLIFAAAAYGQVYEFTGQITPAGRGSVSLYGATQPFTASTLTDDGGRFAFRKLDAGTYTLSVYLPGRGEARQTI
EIGPGTADSRRRVHLSLALREGDFDPTTDRRRHAVSARQLTIPERAVRDYEDSQHDLEKRDVESAEKRLEHAVELAPQFE
NAWNTLGTIAYQTRRFTLAEQRFREALKQDPTAYEPLVNLGGVLVTLHKLDEALEVNVHAALTRPGDALAESQLGMTYFE
LGQFDNAVKHLERARKLDPAHFSHPQLYLAEIHLRRGEKAAAADVLEDFLLHHPDYPQADKVRENIGELRR

Sequences:

>Translated_311_residues
MLRYFRFLIFAAAAYGQVYEFTGQITPAGRGSVSLYGATQPFTASTLTDDGGRFAFRKLDAGTYTLSVYLPGRGEARQTI
EIGPGTADSRRRVHLSLALREGDFDPTTDRRRHAVSARQLTIPERAVRDYEDSQHDLEKRDVESAEKRLEHAVELAPQFE
NAWNTLGTIAYQTRRFTLAEQRFREALKQDPTAYEPLVNLGGVLVTLHKLDEALEVNVHAALTRPGDALAESQLGMTYFE
LGQFDNAVKHLERARKLDPAHFSHPQLYLAEIHLRRGEKAAAADVLEDFLLHHPDYPQADKVRENIGELRR
>Mature_311_residues
MLRYFRFLIFAAAAYGQVYEFTGQITPAGRGSVSLYGATQPFTASTLTDDGGRFAFRKLDAGTYTLSVYLPGRGEARQTI
EIGPGTADSRRRVHLSLALREGDFDPTTDRRRHAVSARQLTIPERAVRDYEDSQHDLEKRDVESAEKRLEHAVELAPQFE
NAWNTLGTIAYQTRRFTLAEQRFREALKQDPTAYEPLVNLGGVLVTLHKLDEALEVNVHAALTRPGDALAESQLGMTYFE
LGQFDNAVKHLERARKLDPAHFSHPQLYLAEIHLRRGEKAAAADVLEDFLLHHPDYPQADKVRENIGELRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=170, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI32307148, Length=170, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35116; Mature: 35116

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYFRFLIFAAAAYGQVYEFTGQITPAGRGSVSLYGATQPFTASTLTDDGGRFAFRKLD
CHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEC
AGTYTLSVYLPGRGEARQTIEIGPGTADSRRRVHLSLALREGDFDPTTDRRRHAVSARQL
CCEEEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHC
TIPERAVRDYEDSQHDLEKRDVESAEKRLEHAVELAPQFENAWNTLGTIAYQTRRFTLAE
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRFREALKQDPTAYEPLVNLGGVLVTLHKLDEALEVNVHAALTRPGDALAESQLGMTYFE
HHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHCCCHHHH
LGQFDNAVKHLERARKLDPAHFSHPQLYLAEIHLRRGEKAAAADVLEDFLLHHPDYPQAD
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCHH
KVRENIGELRR
HHHHHHHHHCC
>Mature Secondary Structure
MLRYFRFLIFAAAAYGQVYEFTGQITPAGRGSVSLYGATQPFTASTLTDDGGRFAFRKLD
CHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEC
AGTYTLSVYLPGRGEARQTIEIGPGTADSRRRVHLSLALREGDFDPTTDRRRHAVSARQL
CCEEEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHC
TIPERAVRDYEDSQHDLEKRDVESAEKRLEHAVELAPQFENAWNTLGTIAYQTRRFTLAE
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRFREALKQDPTAYEPLVNLGGVLVTLHKLDEALEVNVHAALTRPGDALAESQLGMTYFE
HHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHCCCHHHH
LGQFDNAVKHLERARKLDPAHFSHPQLYLAEIHLRRGEKAAAADVLEDFLLHHPDYPQAD
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCHH
KVRENIGELRR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA