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The map label for this gene is 116623135

Identifier: 116623135

GI number: 116623135

Start: 5128325

End: 5130358

Strand: Reverse

Name: 116623135

Synonym: Acid_4041

Alternate gene names: NA

Gene position: 5130358-5128325 (Counterclockwise)

Preceding gene: 116623137

Following gene: 116623131

Centisome position: 51.48

GC content: 65.39

Gene sequence:

>2034_bases
GTGGCCAGGTTTTCCCTTCTGCTTCTGCTGTTGCCGGCGTTGACCGGCCGCGCTGCAAACCTTCCCCAACATCCGCGCCT
GCTCTTCGATTCCGCGGGCGTGGAACGCCTCAAGCTCCGCATCCGGCAGCCGGAGTGGGCGCCGCAGTGGAAAGCCTTCC
GCGGTAGCGTCGATTCGGCGCTGGCGCAAACGGTGGAGCTTCCGCCGCGTGCCGCCAACTGGTGGCATTGGTACGTCTGC
CCCACCCACGGCGCGCGTCTGACCACGGGAAAGCAAATCGCCCCGTGGCAATGGGAGCACATCTGCCCCGTCGATCACGA
AATCCTGCACGGCGATGCCTCGCGCCCCGATCGCGATTTCGACGCCTGCGTGATCAGCGGCGTGCACGATCGCTACGCGC
GCGAGGTACAGCGCACCGGCGTTGTGTACCAGGTCACCGGCGAAGGCAAGTACGCGGCCCGCGCGCGCGAAATCCTCCTG
GCCTACGCCGCAAAGTATTCGACGTACCCGCTGCACACCACGCGCGGACAGGCGCAGGTCGGCGGCGGTCACGTTCACTC
GCAGACGCTCGATGAATCCGTGTGGCTGATCCCGATGGCGCAGGGCGCGGATCTGGTCTGGGACACGCTCTCCGAAGCCG
ACCGCGTTGCCATCGCAAACGGCCTCTTCCAGGCCGCCGCGCGCGATACCATCCTCGTTCACCGCATGGGGATTCACAAT
ATCCAGAACTGGAAGAACAGCGCCGTCGGCCTGACCGGACTGCTGCTGGGCGATGAGGCCCTGATTCGTGCCGCGATCGA
CGATCCCGATCGCGGCTATCGCGCCCAGATGGCCAAGGGCGTCCAGCCCGATGGCGCGTGGTTCGAGGGCGCCTGGGGTT
ATCACTTCTATACCTTGAGCGCGGTGTGGACTCTCGTCGAAGCGGCGCGCAACTGCGGGACGGATCTCTATGGCGAGCCG
CTCAAAAAAATGTTCATGGCCCCGGTCATGCTCGCCATGCCCAACGGTTATCTGCCGGCCTTCAACGATAGCACCGAGGT
CAACGTGCGCAATGATCTGTACGAATTGGCCTATGCGCGATATCGCGAGGCGGCCTTCGCTCGCGGTCTGCCGGCGGGAG
CGAGGCGGAGCGAGTTTGCCCTCTGGTTCGGTGCCGCCGAGGTCCCGGGCCCGGACGCCAAATTGCCCGGCAGCCGCAAC
TCCATCTCCTCGGGCTACGCGATCCTCGAACGCGGCGAAGGCGAGCAAGCCACGTGGCTGTGTCTCAAATATGGACCGCA
CGGCGGCGGCCACGGCCATCCCGACAAGAACAATTTCGTTCTCTATTCGCGCGGCAAAGTCGTGTTCCCCGACTCAGGCA
CGCGCCCGTACGGCTCCCCGCTCCATCTGGAATGGGACAAGGTCAGTCTGGCGCACAACACTCTCGTCGTGGACGGCGCA
TCCCAGGCCGAAGCCACGGGCAAATCGCTGGCCTTCGGCGATCGCTTCGCGATGACCGATGCCGGCAACATCTATCCCGG
AGTCCGCTTCATCCGCACGGCCGTGATGTTGAGTGAAAACCTGATCCTCTTCGTGGACCGCGTTACCGCCGACAAGCCGC
GCACCTTCGATCTGGCCATGCACATCGCCGGAAAATGGATGAACCTGCCTCGCGGCGATGGCGCGACGCTGCCGCCGTCC
GCCGGCTACCAGCACCTGAAAGACGCCACCGTGCGCGGCGCGCCTAACGGCATGACGCTGTCGGTCGATAGCGGCGTCGC
CATCGCCCTGGCGGCGAATCAACCCACGGACGTCATCACCGCCACCGGTGTCGGTAAGTCCACCGAGGATCGCGTGCCGC
TGGCGATCTTCCGGCGCACCGGCCAGGCGGCGGACTATGTTTGGACGGTGTCGCTCGATGGCAAGCCCGCCATGCCGGCG
ATCGTGAAATCGTCCTCGGACGCGGTCTCCGTCAAAGTCGGCGAAGCCGTGGTCACCGTCTCAACGAGCGAGCCGTCGGT
TCGGTGGGAAGCGGAGATGCGCGCTACCAGATGA

Upstream 100 bases:

>100_bases
AGCCTGGAGTGGCCGGGTAAAGAACGCTCAAACGAACCATCGAGGGAGTCTATCATAGCGAGCGTCGCGTGACCTGTTTA
TTCCGTGCTAAGTGTAGGCC

Downstream 100 bases:

>100_bases
AGCGCGCGCTCACCTGGGCGCGCCGCGCGTTCGTGCCGTCGGGATAACCTTGCGAGGCCACGCCCTGCCCGAGATTCGCC
ACCGGTCGCAGCACCAGATT

Product: heparinase II/III family protein

Products: NA

Alternate protein names: Chondroitin AC/Alginate Lyase; Heparinase II/III-Like Protein; Alginate Lyase; Heparinase II/III-Like

Number of amino acids: Translated: 677; Mature: 676

Protein sequence:

>677_residues
MARFSLLLLLLPALTGRAANLPQHPRLLFDSAGVERLKLRIRQPEWAPQWKAFRGSVDSALAQTVELPPRAANWWHWYVC
PTHGARLTTGKQIAPWQWEHICPVDHEILHGDASRPDRDFDACVISGVHDRYAREVQRTGVVYQVTGEGKYAARAREILL
AYAAKYSTYPLHTTRGQAQVGGGHVHSQTLDESVWLIPMAQGADLVWDTLSEADRVAIANGLFQAAARDTILVHRMGIHN
IQNWKNSAVGLTGLLLGDEALIRAAIDDPDRGYRAQMAKGVQPDGAWFEGAWGYHFYTLSAVWTLVEAARNCGTDLYGEP
LKKMFMAPVMLAMPNGYLPAFNDSTEVNVRNDLYELAYARYREAAFARGLPAGARRSEFALWFGAAEVPGPDAKLPGSRN
SISSGYAILERGEGEQATWLCLKYGPHGGGHGHPDKNNFVLYSRGKVVFPDSGTRPYGSPLHLEWDKVSLAHNTLVVDGA
SQAEATGKSLAFGDRFAMTDAGNIYPGVRFIRTAVMLSENLILFVDRVTADKPRTFDLAMHIAGKWMNLPRGDGATLPPS
AGYQHLKDATVRGAPNGMTLSVDSGVAIALAANQPTDVITATGVGKSTEDRVPLAIFRRTGQAADYVWTVSLDGKPAMPA
IVKSSSDAVSVKVGEAVVTVSTSEPSVRWEAEMRATR

Sequences:

>Translated_677_residues
MARFSLLLLLLPALTGRAANLPQHPRLLFDSAGVERLKLRIRQPEWAPQWKAFRGSVDSALAQTVELPPRAANWWHWYVC
PTHGARLTTGKQIAPWQWEHICPVDHEILHGDASRPDRDFDACVISGVHDRYAREVQRTGVVYQVTGEGKYAARAREILL
AYAAKYSTYPLHTTRGQAQVGGGHVHSQTLDESVWLIPMAQGADLVWDTLSEADRVAIANGLFQAAARDTILVHRMGIHN
IQNWKNSAVGLTGLLLGDEALIRAAIDDPDRGYRAQMAKGVQPDGAWFEGAWGYHFYTLSAVWTLVEAARNCGTDLYGEP
LKKMFMAPVMLAMPNGYLPAFNDSTEVNVRNDLYELAYARYREAAFARGLPAGARRSEFALWFGAAEVPGPDAKLPGSRN
SISSGYAILERGEGEQATWLCLKYGPHGGGHGHPDKNNFVLYSRGKVVFPDSGTRPYGSPLHLEWDKVSLAHNTLVVDGA
SQAEATGKSLAFGDRFAMTDAGNIYPGVRFIRTAVMLSENLILFVDRVTADKPRTFDLAMHIAGKWMNLPRGDGATLPPS
AGYQHLKDATVRGAPNGMTLSVDSGVAIALAANQPTDVITATGVGKSTEDRVPLAIFRRTGQAADYVWTVSLDGKPAMPA
IVKSSSDAVSVKVGEAVVTVSTSEPSVRWEAEMRATR
>Mature_676_residues
ARFSLLLLLLPALTGRAANLPQHPRLLFDSAGVERLKLRIRQPEWAPQWKAFRGSVDSALAQTVELPPRAANWWHWYVCP
THGARLTTGKQIAPWQWEHICPVDHEILHGDASRPDRDFDACVISGVHDRYAREVQRTGVVYQVTGEGKYAARAREILLA
YAAKYSTYPLHTTRGQAQVGGGHVHSQTLDESVWLIPMAQGADLVWDTLSEADRVAIANGLFQAAARDTILVHRMGIHNI
QNWKNSAVGLTGLLLGDEALIRAAIDDPDRGYRAQMAKGVQPDGAWFEGAWGYHFYTLSAVWTLVEAARNCGTDLYGEPL
KKMFMAPVMLAMPNGYLPAFNDSTEVNVRNDLYELAYARYREAAFARGLPAGARRSEFALWFGAAEVPGPDAKLPGSRNS
ISSGYAILERGEGEQATWLCLKYGPHGGGHGHPDKNNFVLYSRGKVVFPDSGTRPYGSPLHLEWDKVSLAHNTLVVDGAS
QAEATGKSLAFGDRFAMTDAGNIYPGVRFIRTAVMLSENLILFVDRVTADKPRTFDLAMHIAGKWMNLPRGDGATLPPSA
GYQHLKDATVRGAPNGMTLSVDSGVAIALAANQPTDVITATGVGKSTEDRVPLAIFRRTGQAADYVWTVSLDGKPAMPAI
VKSSSDAVSVKVGEAVVTVSTSEPSVRWEAEMRATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73888; Mature: 73757

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFSLLLLLLPALTGRAANLPQHPRLLFDSAGVERLKLRIRQPEWAPQWKAFRGSVDSA
CCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHCCHHHH
LAQTVELPPRAANWWHWYVCPTHGARLTTGKQIAPWQWEHICPVDHEILHGDASRPDRDF
HHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
DACVISGVHDRYAREVQRTGVVYQVTGEGKYAARAREILLAYAAKYSTYPLHTTRGQAQV
CHHHHCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCC
GGGHVHSQTLDESVWLIPMAQGADLVWDTLSEADRVAIANGLFQAAARDTILVHRMGIHN
CCCEEECCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHH
IQNWKNSAVGLTGLLLGDEALIRAAIDDPDRGYRAQMAKGVQPDGAWFEGAWGYHFYTLS
HHHCCCCCCCEEEEEECCHHHEEEECCCCCCCHHHHHHCCCCCCCCEECCCCCCHHHHHH
AVWTLVEAARNCGTDLYGEPLKKMFMAPVMLAMPNGYLPAFNDSTEVNVRNDLYELAYAR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHH
YREAAFARGLPAGARRSEFALWFGAAEVPGPDAKLPGSRNSISSGYAILERGEGEQATWL
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEE
CLKYGPHGGGHGHPDKNNFVLYSRGKVVFPDSGTRPYGSPLHLEWDKVSLAHNTLVVDGA
EEEECCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCEEEEEEEEEEEECEEEEECC
SQAEATGKSLAFGDRFAMTDAGNIYPGVRFIRTAVMLSENLILFVDRVTADKPRTFDLAM
CHHHCCCCCEECCCCEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEE
HIAGKWMNLPRGDGATLPPSAGYQHLKDATVRGAPNGMTLSVDSGVAIALAANQPTDVIT
EECHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEE
ATGVGKSTEDRVPLAIFRRTGQAADYVWTVSLDGKPAMPAIVKSSSDAVSVKVGEAVVTV
ECCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCEEEEEECCEEEEE
STSEPSVRWEAEMRATR
ECCCCCEEEECCCCCCC
>Mature Secondary Structure 
ARFSLLLLLLPALTGRAANLPQHPRLLFDSAGVERLKLRIRQPEWAPQWKAFRGSVDSA
CHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHCCHHHH
LAQTVELPPRAANWWHWYVCPTHGARLTTGKQIAPWQWEHICPVDHEILHGDASRPDRDF
HHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
DACVISGVHDRYAREVQRTGVVYQVTGEGKYAARAREILLAYAAKYSTYPLHTTRGQAQV
CHHHHCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCC
GGGHVHSQTLDESVWLIPMAQGADLVWDTLSEADRVAIANGLFQAAARDTILVHRMGIHN
CCCEEECCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHH
IQNWKNSAVGLTGLLLGDEALIRAAIDDPDRGYRAQMAKGVQPDGAWFEGAWGYHFYTLS
HHHCCCCCCCEEEEEECCHHHEEEECCCCCCCHHHHHHCCCCCCCCEECCCCCCHHHHHH
AVWTLVEAARNCGTDLYGEPLKKMFMAPVMLAMPNGYLPAFNDSTEVNVRNDLYELAYAR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHH
YREAAFARGLPAGARRSEFALWFGAAEVPGPDAKLPGSRNSISSGYAILERGEGEQATWL
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEE
CLKYGPHGGGHGHPDKNNFVLYSRGKVVFPDSGTRPYGSPLHLEWDKVSLAHNTLVVDGA
EEEECCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCEEEEEEEEEEEECEEEEECC
SQAEATGKSLAFGDRFAMTDAGNIYPGVRFIRTAVMLSENLILFVDRVTADKPRTFDLAM
CHHHCCCCCEECCCCEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEE
HIAGKWMNLPRGDGATLPPSAGYQHLKDATVRGAPNGMTLSVDSGVAIALAANQPTDVIT
EECHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEE
ATGVGKSTEDRVPLAIFRRTGQAADYVWTVSLDGKPAMPAIVKSSSDAVSVKVGEAVVTV
ECCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCEEEEEECCEEEEE
STSEPSVRWEAEMRATR
ECCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA