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The map label for this gene is dmpD [H]

Identifier: 116623116

GI number: 116623116

Start: 5098239

End: 5099039

Strand: Direct

Name: dmpD [H]

Synonym: Acid_4021

Alternate gene names: 116623116

Gene position: 5098239-5099039 (Clockwise)

Preceding gene: 116623115

Following gene: 116623117

Centisome position: 51.16

GC content: 59.93

Gene sequence:

>801_bases
ATGACTCAGCCAATCCAGCCAACAACGGGCTACGCGCGGGTAAATGAAATCGACATGTACTACGAAGTCCACGGCGGCGG
CGAACCGGTGGTGTTGCTTCACGGCGCGTTCATGACCATCACCAACAACTGGGCCGGGTGGATCAGCGAGCTCTCCAAAA
CACGGAAAGTCATTGCTGTCGAAATGCAAGGTCACGGCCGCACGGCGGACGTCGCAAGAGATTTCACCTACGAAAACCTC
GCCGACGACGTGGCCGCACTGCTCAATTATCTTAAGATCCCGCGAGCGGACCTTATCGGCTACAGCGTGGGCGGAGCCGT
GGCCATGCAGTGTGCGATCCGCCATCCGGACACGGTGCGAAGGGCAGTCATCATTTCGTCCACGTGCCGCCGTGACGGCA
TGATCGCGGAAGCGGTCGAAGCTATCCCGAAACTCACGGCGGACGCTTTCAAAGGCTCGCCCATTGAGGCCGAGTACAAG
AAGCTGAGTCCGACTCCGGACGACTTTCCGAACTTCGTCCCGCGAATCGTCGCCACGTTCTCGAAAGGGTACGACTGCGG
AGCCGACAAGCTTAAGGCCACCACGACGCCCATGTTTTTCATCCACGGAGACGCTGACGGCGTGCGGCTCGCGCACGTCG
CGGAGATGTTTCGCCTAAAGGGTGGCGAGATCCACGGCGACATGAAACCGCGCTCCGCATCGCGATTGGCCATCTTGCCC
GACACCACCCACGTGACACTGATGCAGCGCATACCCATCATCGTCCCCATGGTGAACGACTTTCTCGACGCCAAGCCGTA
G

Upstream 100 bases:

>100_bases
CGAAGGAAGCGCTTGACTCCGGATCGACGGGCGCGATGCCCGAGGCGCTCGACCAACTCGACGAGCTTCTCGCCAGCCTG
GGATCAACTACGGAAACAAA

Downstream 100 bases:

>100_bases
CCGTGCTACGGCTCGCGCCGCTTACCGAACGCGAAATTCGTACCGCAGTCAACACGACCGTCCGCCTGATCGAACCTGCA
CCAACGAAAGTTCCTCCTCC

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: HMSH [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTQPIQPTTGYARVNEIDMYYEVHGGGEPVVLLHGAFMTITNNWAGWISELSKTRKVIAVEMQGHGRTADVARDFTYENL
ADDVAALLNYLKIPRADLIGYSVGGAVAMQCAIRHPDTVRRAVIISSTCRRDGMIAEAVEAIPKLTADAFKGSPIEAEYK
KLSPTPDDFPNFVPRIVATFSKGYDCGADKLKATTTPMFFIHGDADGVRLAHVAEMFRLKGGEIHGDMKPRSASRLAILP
DTTHVTLMQRIPIIVPMVNDFLDAKP

Sequences:

>Translated_266_residues
MTQPIQPTTGYARVNEIDMYYEVHGGGEPVVLLHGAFMTITNNWAGWISELSKTRKVIAVEMQGHGRTADVARDFTYENL
ADDVAALLNYLKIPRADLIGYSVGGAVAMQCAIRHPDTVRRAVIISSTCRRDGMIAEAVEAIPKLTADAFKGSPIEAEYK
KLSPTPDDFPNFVPRIVATFSKGYDCGADKLKATTTPMFFIHGDADGVRLAHVAEMFRLKGGEIHGDMKPRSASRLAILP
DTTHVTLMQRIPIIVPMVNDFLDAKP
>Mature_265_residues
TQPIQPTTGYARVNEIDMYYEVHGGGEPVVLLHGAFMTITNNWAGWISELSKTRKVIAVEMQGHGRTADVARDFTYENLA
DDVAALLNYLKIPRADLIGYSVGGAVAMQCAIRHPDTVRRAVIISSTCRRDGMIAEAVEAIPKLTADAFKGSPIEAEYKK
LSPTPDDFPNFVPRIVATFSKGYDCGADKLKATTTPMFFIHGDADGVRLAHVAEMFRLKGGEIHGDMKPRSASRLAILPD
TTHVTLMQRIPIIVPMVNDFLDAKP

Specific function: Conversion of 2-hydroxymuconic acid semialdehyde to 2- hydroxypent-2,4-dienoate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 29173; Mature: 29042

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPIQPTTGYARVNEIDMYYEVHGGGEPVVLLHGAFMTITNNWAGWISELSKTRKVIAV
CCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEECEEEEEECCHHHHHHHHHHCCEEEEE
EMQGHGRTADVARDFTYENLADDVAALLNYLKIPRADLIGYSVGGAVAMQCAIRHPDTVR
EECCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCEECCCHHHHHHHHHCCCHHHH
RAVIISSTCRRDGMIAEAVEAIPKLTADAFKGSPIEAEYKKLSPTPDDFPNFVPRIVATF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH
SKGYDCGADKLKATTTPMFFIHGDADGVRLAHVAEMFRLKGGEIHGDMKPRSASRLAILP
HCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCEEEECC
DTTHVTLMQRIPIIVPMVNDFLDAKP
CCCHHHHHHHCCEEEEHHHHHHCCCC
>Mature Secondary Structure 
TQPIQPTTGYARVNEIDMYYEVHGGGEPVVLLHGAFMTITNNWAGWISELSKTRKVIAV
CCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEECEEEEEECCHHHHHHHHHHCCEEEEE
EMQGHGRTADVARDFTYENLADDVAALLNYLKIPRADLIGYSVGGAVAMQCAIRHPDTVR
EECCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCEECCCHHHHHHHHHCCCHHHH
RAVIISSTCRRDGMIAEAVEAIPKLTADAFKGSPIEAEYKKLSPTPDDFPNFVPRIVATF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH
SKGYDCGADKLKATTTPMFFIHGDADGVRLAHVAEMFRLKGGEIHGDMKPRSASRLAILP
HCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCEEEECC
DTTHVTLMQRIPIIVPMVNDFLDAKP
CCCHHHHHHHCCEEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2194577 [H]