Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116623112

Identifier: 116623112

GI number: 116623112

Start: 5092332

End: 5093501

Strand: Direct

Name: 116623112

Synonym: Acid_4017

Alternate gene names: NA

Gene position: 5092332-5093501 (Clockwise)

Preceding gene: 116623110

Following gene: 116623113

Centisome position: 51.1

GC content: 63.33

Gene sequence:

>1170_bases
GTGACCCTAACCCGGCGATCATTCTGTGTTTCCCTCGGTGCGCTTCCCCTGTTTGCCGCCAGTGACCGTCGCGGAATCCT
GCTCACCGCGGAGCAGGCCGAGCGCCTGCGCGCCATCCCGGTGCCGGATGCGGTCCGCCAAAATGCGTCGGCCGCCCTCA
ACGCCGGACCGTGGAGCGTCACTACCCATCGCCCCGAGCATGTCAGCGTCGGCCCCAACGAATACTACAGCGAGGGTCCT
TACTGGTGGCCTGATCCCAAGAACCCCGACGGTCCATATATCCGTCGGGACGGCGAACGCAACCCGACCCGCTTCATGGG
GAATCGCCGGGATCTCGGCGAGATGTGCACCGCGGTGCTCGCGCTCGGCACCAGCGCCTTCCTGCTCGGCGACAAGGCTT
GCGGCGCTCACGCAGCCAGGGTGCTCTCCACCTGGTTCGTGGACCCGAAGACGCGCATGAATCCCAACCTGGAATTCGGG
CAGGCCGTGCGCGGTGTCAGCACCGGGCGCGGGACCGGGCTCATCGACACCGTCTCCCTCATCCATGCCGCCCAGGGGAT
CTGGCTCCTGGAACGCGCCGGCATGCTCGATTCCGGCCTTGCCGGCGGCGTGCGGGCATGGTACTCCGACTTCCTTAAAT
GGATGACCACCGACAGCAAGGGGCTGGACGAAAAGAGATCCGGCAACAATCATGCCACCTGGTGGACCGCGCAGGTCGCG
TCCTATGCCACCCTCACCGGCAACGAGCCAGCCAAATCCATGGCTTGGGAGCATTACCGCAAGGTTCTCGTGCCGGAGGA
GATCAAACCGGAGGGCAGTTGCCCCCGTGAAGAATCGCGCACCAATTCCTTGAGCTACTCGGCAATGAACCTGGATGCCT
TCAGCGTAGTCTGCCGCGTGGCGGCCACCAACGGCCAGGACCTATGGAACTTTCGTACTCATCAGGGGGTCGGAGTGGTC
AACGCCTTCGACTATCTGACGCCCTATGTGCTCCGCCCGGATACCTGGAAGAAGGAACAGATTACCAGGTTTAACCCCGA
CACCACCTTCTTTCCCGGCCTGGCCGGAATCGGTCTCGGCTCGAAACCACTGGCAGAGGCCTACGCGCGCCTTCCCCGCT
CCACGTCGCCCTGGAGCCAGTTCCTATGTTTATTGGTTAAGATTGGTTAA

Upstream 100 bases:

>100_bases
CGGCCGGCGTTTAACGCCTTCCCCACGCAGGTATTGAACTCTCCGGGCGCACAACGCATCCTGACTTTGCAGTCGGCGCG
CTCGGCGCTAAACTACGCTT

Downstream 100 bases:

>100_bases
CTTGTCCTCCGGCCCCTCGTTGTCCCGCCCTGAGAGTAAAATCCAGGCTGACCTGTTGCAAATTCCCGCCATTTGACGAA
GCTTCTCCCCAAAAAGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MTLTRRSFCVSLGALPLFAASDRRGILLTAEQAERLRAIPVPDAVRQNASAALNAGPWSVTTHRPEHVSVGPNEYYSEGP
YWWPDPKNPDGPYIRRDGERNPTRFMGNRRDLGEMCTAVLALGTSAFLLGDKACGAHAARVLSTWFVDPKTRMNPNLEFG
QAVRGVSTGRGTGLIDTVSLIHAAQGIWLLERAGMLDSGLAGGVRAWYSDFLKWMTTDSKGLDEKRSGNNHATWWTAQVA
SYATLTGNEPAKSMAWEHYRKVLVPEEIKPEGSCPREESRTNSLSYSAMNLDAFSVVCRVAATNGQDLWNFRTHQGVGVV
NAFDYLTPYVLRPDTWKKEQITRFNPDTTFFPGLAGIGLGSKPLAEAYARLPRSTSPWSQFLCLLVKIG

Sequences:

>Translated_389_residues
MTLTRRSFCVSLGALPLFAASDRRGILLTAEQAERLRAIPVPDAVRQNASAALNAGPWSVTTHRPEHVSVGPNEYYSEGP
YWWPDPKNPDGPYIRRDGERNPTRFMGNRRDLGEMCTAVLALGTSAFLLGDKACGAHAARVLSTWFVDPKTRMNPNLEFG
QAVRGVSTGRGTGLIDTVSLIHAAQGIWLLERAGMLDSGLAGGVRAWYSDFLKWMTTDSKGLDEKRSGNNHATWWTAQVA
SYATLTGNEPAKSMAWEHYRKVLVPEEIKPEGSCPREESRTNSLSYSAMNLDAFSVVCRVAATNGQDLWNFRTHQGVGVV
NAFDYLTPYVLRPDTWKKEQITRFNPDTTFFPGLAGIGLGSKPLAEAYARLPRSTSPWSQFLCLLVKIG
>Mature_388_residues
TLTRRSFCVSLGALPLFAASDRRGILLTAEQAERLRAIPVPDAVRQNASAALNAGPWSVTTHRPEHVSVGPNEYYSEGPY
WWPDPKNPDGPYIRRDGERNPTRFMGNRRDLGEMCTAVLALGTSAFLLGDKACGAHAARVLSTWFVDPKTRMNPNLEFGQ
AVRGVSTGRGTGLIDTVSLIHAAQGIWLLERAGMLDSGLAGGVRAWYSDFLKWMTTDSKGLDEKRSGNNHATWWTAQVAS
YATLTGNEPAKSMAWEHYRKVLVPEEIKPEGSCPREESRTNSLSYSAMNLDAFSVVCRVAATNGQDLWNFRTHQGVGVVN
AFDYLTPYVLRPDTWKKEQITRFNPDTTFFPGLAGIGLGSKPLAEAYARLPRSTSPWSQFLCLLVKIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42912; Mature: 42781

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTRRSFCVSLGALPLFAASDRRGILLTAEQAERLRAIPVPDAVRQNASAALNAGPWSV
CCCCHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHCCCCCCHHHHCCCCCEECCCCCCE
TTHRPEHVSVGPNEYYSEGPYWWPDPKNPDGPYIRRDGERNPTRFMGNRRDLGEMCTAVL
ECCCCCEEECCCHHHHCCCCEECCCCCCCCCCCEECCCCCCHHHHCCCCCCHHHHHHHHH
ALGTSAFLLGDKACGAHAARVLSTWFVDPKTRMNPNLEFGQAVRGVSTGRGTGLIDTVSL
HHCCHHEEECCCHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
IHAAQGIWLLERAGMLDSGLAGGVRAWYSDFLKWMTTDSKGLDEKRSGNNHATWWTAQVA
HHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEHHH
SYATLTGNEPAKSMAWEHYRKVLVPEEIKPEGSCPREESRTNSLSYSAMNLDAFSVVCRV
HEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECHHHHHHHHHH
AATNGQDLWNFRTHQGVGVVNAFDYLTPYVLRPDTWKKEQITRFNPDTTFFPGLAGIGLG
HCCCCCHHHCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCEEECCCCCCCCCHHCCCCC
SKPLAEAYARLPRSTSPWSQFLCLLVKIG
CHHHHHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TLTRRSFCVSLGALPLFAASDRRGILLTAEQAERLRAIPVPDAVRQNASAALNAGPWSV
CCCHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHCCCCCCHHHHCCCCCEECCCCCCE
TTHRPEHVSVGPNEYYSEGPYWWPDPKNPDGPYIRRDGERNPTRFMGNRRDLGEMCTAVL
ECCCCCEEECCCHHHHCCCCEECCCCCCCCCCCEECCCCCCHHHHCCCCCCHHHHHHHHH
ALGTSAFLLGDKACGAHAARVLSTWFVDPKTRMNPNLEFGQAVRGVSTGRGTGLIDTVSL
HHCCHHEEECCCHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
IHAAQGIWLLERAGMLDSGLAGGVRAWYSDFLKWMTTDSKGLDEKRSGNNHATWWTAQVA
HHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEHHH
SYATLTGNEPAKSMAWEHYRKVLVPEEIKPEGSCPREESRTNSLSYSAMNLDAFSVVCRV
HEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECHHHHHHHHHH
AATNGQDLWNFRTHQGVGVVNAFDYLTPYVLRPDTWKKEQITRFNPDTTFFPGLAGIGLG
HCCCCCHHHCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCEEECCCCCCCCCHHCCCCC
SKPLAEAYARLPRSTSPWSQFLCLLVKIG
CHHHHHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA