| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623109
Identifier: 116623109
GI number: 116623109
Start: 5086410
End: 5088101
Strand: Direct
Name: 116623109
Synonym: Acid_4013
Alternate gene names: NA
Gene position: 5086410-5088101 (Clockwise)
Preceding gene: 116623108
Following gene: 116623110
Centisome position: 51.04
GC content: 64.54
Gene sequence:
>1692_bases ATGATAAAATCCGGCAAGGTGTTTACATCCCCGCGACTGCTCGCACTCGGATTTACCGTTGCCATACTAATGGGTCAGCA GCCCGCGCCGGTATTCCGCGCGGGCGCGAAGCTGGTGGAACTTACCGTCACGGTTCTCGACAAGAAAGGGAATGCGGTTG CCGGGCTGGAGCCGGCAGATTTCACCATACTCGACGAAGGCAAGCCGCGTCCGGTAGCCCTGTTTCGGTTCGACGGCGTC CCGGCGGCAGCCCCCGCCGCTACGGCGCCGGCTCCGCCTCTGCCTCCGGGTGTCTTCAGCAACCGCTTCGAGCGGGCCGG CGAGGAGACGCCGCGCAACATCACGGCGCTGGTACTGGACACCCTCAACACGCCTCCGGAGCAGAGCACAGTCGCGCGAG CCCAGATGTTTCGCTACCTGAGAACGCTGGCGCCGCAGACCCGAGTCGCCCTGTTCCTGATGGGAACCCAGCTCCGAATC CTGCACGATTTCACTGACGACGCCGATGCGCTGCGCGCCAAACTCGACAAGGCCACGCTCGCAATGCCGCTGGCCAATGT CACGAACTACTCGCAATCCATTGTCGAAGCGGAGGCCTTCGTGAATATGTTCGCCGGAGACCCGGCGATGCAGAAGGCCG CCGAAGAGATGGCGCGCACCATGCTCGAGGTGGAAGGCATGGCGAACGCCCAGGCGCGGCGCCTGCGCATGGAGCGCAGC CTCGCCGCCATGGAAGCGCTGGGCCAGCACCTGGCCGGCATCCCAGGCCGCAAAAACCTGGTCTGGATCGGCTCCGGCTT CTCCATGCTCTCGATCACGGGCGCGATGGGGATGGGGATTCACGGCAGCGTGGACAACTTCGAGCTCAAGGTGCGGCAGG CGTCGCAGCGCCTGGCACAACAGGGGATCATTCTCTACATCGTCGATTCCAAGGGCCTCGATATTCCCTGGGACCAGACC GCCGCCGCCCGCACTACGCTGCCGCCTCGGGGCCGCGGCCGCTTCGAACCGCAGATGGATTCCGAAAGCGCGAGCAACGA TCCGCGGCCGGCGATGGGGCTGATGGCAGCGATCACCGGCGGACGGTACCTTCACAACACCAACGATCTCACCGCGGGAT TCAAACAGACCGCGACCGACATGCAGGGCAGCTACTCACTTGGCTTCTACATGCCAGGCGATCCGGACAATAAGTGGCAC AAGCTCAAGATCCAGGTGAAGCGACCCGGAGTAAGCGTGCGCCATCGTGAGGGATACCTGGCGAGCCTCGGTCCCGACCA GTCCCCCGCCTGGACGACCGAGAATTGGCGCGCCGCATTCGCCAATCCGCTCGCTTCCACGGTGATTCCGCTCGCTGCAA AGTGCGAACGAACGCCATCCGGCGAACTGGCGCTCACGGTCGTCACGGAGGTGACGGCGGTCCAGTTCCGCACCGAGGGC GAGAATCGAATCGCCGAGCTCGAGGTCGCGATCGGGGATTTCGCACCCGATGGATCGGGGCACACCAGTCGCAATGTGTT CAGCGCATCGGTTCCGGCGGCGAAGTGGGAGGACGCGAGCAAACAAGGCCTCACCTATTCGCACACGTGGAAGCCGGCCG CGGAGGTGACCCGCCTGCGGGTTATTGTCCACGACGTCCGCGGCGGCCAGTACGGCACGCTCGATATCCCGCTCGGCAAG CTTTCCCAATAG
Upstream 100 bases:
>100_bases ATCTCGATCGCGCGGCTGTGGGCGCCCGGCACGCTCTCCGACGCGGCGCGGAAACGCAGCGCCGATAATCCCTTCCGGCA GTGAGGGCGTTCAACAACAG
Downstream 100 bases:
>100_bases GCCGCGAGCGCTGTTATATTCAGGCTTCGTCAAGGAGATCCCATGAAAGCGATCAGCAGGCGACAGGCGCTGGCAGGAGT GGCCAGTGGAATGATGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MIKSGKVFTSPRLLALGFTVAILMGQQPAPVFRAGAKLVELTVTVLDKKGNAVAGLEPADFTILDEGKPRPVALFRFDGV PAAAPAATAPAPPLPPGVFSNRFERAGEETPRNITALVLDTLNTPPEQSTVARAQMFRYLRTLAPQTRVALFLMGTQLRI LHDFTDDADALRAKLDKATLAMPLANVTNYSQSIVEAEAFVNMFAGDPAMQKAAEEMARTMLEVEGMANAQARRLRMERS LAAMEALGQHLAGIPGRKNLVWIGSGFSMLSITGAMGMGIHGSVDNFELKVRQASQRLAQQGIILYIVDSKGLDIPWDQT AAARTTLPPRGRGRFEPQMDSESASNDPRPAMGLMAAITGGRYLHNTNDLTAGFKQTATDMQGSYSLGFYMPGDPDNKWH KLKIQVKRPGVSVRHREGYLASLGPDQSPAWTTENWRAAFANPLASTVIPLAAKCERTPSGELALTVVTEVTAVQFRTEG ENRIAELEVAIGDFAPDGSGHTSRNVFSASVPAAKWEDASKQGLTYSHTWKPAAEVTRLRVIVHDVRGGQYGTLDIPLGK LSQ
Sequences:
>Translated_563_residues MIKSGKVFTSPRLLALGFTVAILMGQQPAPVFRAGAKLVELTVTVLDKKGNAVAGLEPADFTILDEGKPRPVALFRFDGV PAAAPAATAPAPPLPPGVFSNRFERAGEETPRNITALVLDTLNTPPEQSTVARAQMFRYLRTLAPQTRVALFLMGTQLRI LHDFTDDADALRAKLDKATLAMPLANVTNYSQSIVEAEAFVNMFAGDPAMQKAAEEMARTMLEVEGMANAQARRLRMERS LAAMEALGQHLAGIPGRKNLVWIGSGFSMLSITGAMGMGIHGSVDNFELKVRQASQRLAQQGIILYIVDSKGLDIPWDQT AAARTTLPPRGRGRFEPQMDSESASNDPRPAMGLMAAITGGRYLHNTNDLTAGFKQTATDMQGSYSLGFYMPGDPDNKWH KLKIQVKRPGVSVRHREGYLASLGPDQSPAWTTENWRAAFANPLASTVIPLAAKCERTPSGELALTVVTEVTAVQFRTEG ENRIAELEVAIGDFAPDGSGHTSRNVFSASVPAAKWEDASKQGLTYSHTWKPAAEVTRLRVIVHDVRGGQYGTLDIPLGK LSQ >Mature_563_residues MIKSGKVFTSPRLLALGFTVAILMGQQPAPVFRAGAKLVELTVTVLDKKGNAVAGLEPADFTILDEGKPRPVALFRFDGV PAAAPAATAPAPPLPPGVFSNRFERAGEETPRNITALVLDTLNTPPEQSTVARAQMFRYLRTLAPQTRVALFLMGTQLRI LHDFTDDADALRAKLDKATLAMPLANVTNYSQSIVEAEAFVNMFAGDPAMQKAAEEMARTMLEVEGMANAQARRLRMERS LAAMEALGQHLAGIPGRKNLVWIGSGFSMLSITGAMGMGIHGSVDNFELKVRQASQRLAQQGIILYIVDSKGLDIPWDQT AAARTTLPPRGRGRFEPQMDSESASNDPRPAMGLMAAITGGRYLHNTNDLTAGFKQTATDMQGSYSLGFYMPGDPDNKWH KLKIQVKRPGVSVRHREGYLASLGPDQSPAWTTENWRAAFANPLASTVIPLAAKCERTPSGELALTVVTEVTAVQFRTEG ENRIAELEVAIGDFAPDGSGHTSRNVFSASVPAAKWEDASKQGLTYSHTWKPAAEVTRLRVIVHDVRGGQYGTLDIPLGK LSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60828; Mature: 60828
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSGKVFTSPRLLALGFTVAILMGQQPAPVFRAGAKLVELTVTVLDKKGNAVAGLEPAD CCCCCCEECCCCHHHHHHHHHHEECCCCCHHHHHCCEEEEEEEEEEECCCCEEECCCCCC FTILDEGKPRPVALFRFDGVPAAAPAATAPAPPLPPGVFSNRFERAGEETPRNITALVLD EEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEE TLNTPPEQSTVARAQMFRYLRTLAPQTRVALFLMGTQLRILHDFTDDADALRAKLDKATL CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHH AMPLANVTNYSQSIVEAEAFVNMFAGDPAMQKAAEEMARTMLEVEGMANAQARRLRMERS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LAAMEALGQHLAGIPGRKNLVWIGSGFSMLSITGAMGMGIHGSVDNFELKVRQASQRLAQ HHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEHHHHCCCCCCCCCCEEEEHHHHHHHHHH QGIILYIVDSKGLDIPWDQTAAARTTLPPRGRGRFEPQMDSESASNDPRPAMGLMAAITG CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC GRYLHNTNDLTAGFKQTATDMQGSYSLGFYMPGDPDNKWHKLKIQVKRPGVSVRHREGYL CCEEECCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEECCCEE ASLGPDQSPAWTTENWRAAFANPLASTVIPLAAKCERTPSGELALTVVTEVTAVQFRTEG EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEECC ENRIAELEVAIGDFAPDGSGHTSRNVFSASVPAAKWEDASKQGLTYSHTWKPAAEVTRLR CCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHEE VIVHDVRGGQYGTLDIPLGKLSQ EEEEECCCCCEEEEECCHHCCCC >Mature Secondary Structure MIKSGKVFTSPRLLALGFTVAILMGQQPAPVFRAGAKLVELTVTVLDKKGNAVAGLEPAD CCCCCCEECCCCHHHHHHHHHHEECCCCCHHHHHCCEEEEEEEEEEECCCCEEECCCCCC FTILDEGKPRPVALFRFDGVPAAAPAATAPAPPLPPGVFSNRFERAGEETPRNITALVLD EEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEE TLNTPPEQSTVARAQMFRYLRTLAPQTRVALFLMGTQLRILHDFTDDADALRAKLDKATL CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHH AMPLANVTNYSQSIVEAEAFVNMFAGDPAMQKAAEEMARTMLEVEGMANAQARRLRMERS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LAAMEALGQHLAGIPGRKNLVWIGSGFSMLSITGAMGMGIHGSVDNFELKVRQASQRLAQ HHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEHHHHCCCCCCCCCCEEEEHHHHHHHHHH QGIILYIVDSKGLDIPWDQTAAARTTLPPRGRGRFEPQMDSESASNDPRPAMGLMAAITG CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC GRYLHNTNDLTAGFKQTATDMQGSYSLGFYMPGDPDNKWHKLKIQVKRPGVSVRHREGYL CCEEECCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEECCCEE ASLGPDQSPAWTTENWRAAFANPLASTVIPLAAKCERTPSGELALTVVTEVTAVQFRTEG EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEECC ENRIAELEVAIGDFAPDGSGHTSRNVFSASVPAAKWEDASKQGLTYSHTWKPAAEVTRLR CCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHEE VIVHDVRGGQYGTLDIPLGKLSQ EEEEECCCCCEEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA