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The map label for this gene is 116623094

Identifier: 116623094

GI number: 116623094

Start: 5067767

End: 5068189

Strand: Direct

Name: 116623094

Synonym: Acid_3998

Alternate gene names: NA

Gene position: 5067767-5068189 (Clockwise)

Preceding gene: 116623092

Following gene: 116623095

Centisome position: 50.85

GC content: 59.57

Gene sequence:

>423_bases
TTGTTTGACGGTCCAGAGACGCTTGAGGAGCAATTCGAGGGCGATGGGACCGTGCAGAAAGTAAAAAGCGCAGTGTCGGA
CGCTGCAGAAAAGGCACAGCAGAAAGCCGGACAGGCCGGCCGCGCGGTCCAGGACAAAATCGATGAAAACCGCGGAGCGG
CAGCCGACAAATTGCAGAGTGTCGCGGCAACGCTCCAAGAAAAGGCCGACAGCCTGCCGGGGGGCGAGAAAGTTGCAAGC
CTCGCCCACAATGCCGCCGATAAGGTGGAGGCAACGGCGCAATATGTTCGGGAGCACGATGTCCAGGGAATGATGGCAGA
TCTGGAAACCTTGGTCCGCAGGCACCCGGCTCAATCCCTCGCTGCCGCCGCAGCAGTGGGCTTTCTTTTAGGCCGAGCTC
TTAGGAGCGACGATTGGTCGTAA

Upstream 100 bases:

>100_bases
CTTCCCGATCTGTACACTCAGTTAGGGCGTCTGGCGGAAGACGTGCTTTCCGAGGAGACCAAGCCAACAGGCTGCGAAAG
GAAACAATATGGCAAAGCAA

Downstream 100 bases:

>100_bases
CTATTCCGGGACAGTAATATGGCATATCAAGGGGAGCGTTCCTTTTCTGAGGTTTTCGAAAGCATCGTCGGCAATGTCCA
GACCATGATCCGATCCGAGA

Product: late embryogenesis abundant protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MFDGPETLEEQFEGDGTVQKVKSAVSDAAEKAQQKAGQAGRAVQDKIDENRGAAADKLQSVAATLQEKADSLPGGEKVAS
LAHNAADKVEATAQYVREHDVQGMMADLETLVRRHPAQSLAAAAAVGFLLGRALRSDDWS

Sequences:

>Translated_140_residues
MFDGPETLEEQFEGDGTVQKVKSAVSDAAEKAQQKAGQAGRAVQDKIDENRGAAADKLQSVAATLQEKADSLPGGEKVAS
LAHNAADKVEATAQYVREHDVQGMMADLETLVRRHPAQSLAAAAAVGFLLGRALRSDDWS
>Mature_140_residues
MFDGPETLEEQFEGDGTVQKVKSAVSDAAEKAQQKAGQAGRAVQDKIDENRGAAADKLQSVAATLQEKADSLPGGEKVAS
LAHNAADKVEATAQYVREHDVQGMMADLETLVRRHPAQSLAAAAAVGFLLGRALRSDDWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14788; Mature: 14788

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDGPETLEEQFEGDGTVQKVKSAVSDAAEKAQQKAGQAGRAVQDKIDENRGAAADKLQS
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHH
VAATLQEKADSLPGGEKVASLAHNAADKVEATAQYVREHDVQGMMADLETLVRRHPAQSL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAAAAVGFLLGRALRSDDWS
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFDGPETLEEQFEGDGTVQKVKSAVSDAAEKAQQKAGQAGRAVQDKIDENRGAAADKLQS
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHH
VAATLQEKADSLPGGEKVASLAHNAADKVEATAQYVREHDVQGMMADLETLVRRHPAQSL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAAAAVGFLLGRALRSDDWS
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA