| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116623087
GI number: 116623087
Start: 5060382
End: 5063012
Strand: Reverse
Name: macB [H]
Synonym: Acid_3991
Alternate gene names: 116623087
Gene position: 5063012-5060382 (Counterclockwise)
Preceding gene: 116623088
Following gene: 116623083
Centisome position: 50.8
GC content: 66.93
Gene sequence:
>2631_bases ATGAAGCGATTATTCCGTCTCTTCCGCCGTTCCGCCGCCGACCGCGAGCTCGCCGGTGAGATGCGCGCTCACTTTGAAGA GAAAGTCGATGAGCTGATGGAAGCCGGCATGAGCCGCCACGCTGCCCTGAAGGAGGCGCGGCGTCGCTTCGGCAATGTGA CTTCCGCGGCCGAGCGCAGTCGCGACATATGGGCCTACCCGTTCCTCGAGAACTTGCTCCACGATTTCCGCTACGCCCTG CGGTCGCTGGCCCAAAAACCCATGTTCGCGGCCGTGGTGGTATTGCCCCTGGCTCTCGGAATCGGGGCGAACACCGCCAT TTTTACCATCGTGGACGCCGCGCTCATTCGCGCCCTGCCCTACCGCCAGCCGGACCGCCTGGTCCACCTCTTCGAAGTCA AGGAGAACGGGGAAGACCCGCATGAGGCGTCCTACCCCGACCTTCAGGATTGGGCGCGCGCTCATCAATATGTCGAAAGC CTCGGAGCTTACGTGAGCTACGGCCTTGGCGCCACGCTCTCGGGGTCAGGTCAGCCGGAGCGCATCGTGATCGCGGGAGC CAGTCCGGGATTCTTTCCGCTGCTCGGCGTGCAGGCAGCGCTCGGCCGCACTTTCCTGCCGGATGAAGACCAGCCCGGCG CATCCCGCGTTGCCGTGTTGAGCGACAGCCTGTGGCGCCGGCGCTTCGGCGCCGACCCGGCCATTGTCGGCAAAACCATC CTCTTGAACTCCCGGCAAGCCATGGTGGTGGGTGTGCTGCCGCCGGATTTCCAGTTTGCTCCGGTCGGCGAGGCGGATCT CTGGATGGCCGCGTTTCCCAGTCCAAACCAGCGGCAGCGCCGCTACTGGCACTGGATCCAGGCGATCGCGCGCCTGAAGC CCGGCGCCACCGTCGCGCAGGCGCAGGCGGAGATGTCCGGCATCGCGCGTGAAATCATCCGCCAGGACCCCAAGCACACC GGCACTACGATAGCGGTCAAGCCACTGCACGATGTCGTCGTCGGCAACGTGCGGCCGGTACTGCTCGTCCTCCTGGGCAC CATCGCGCTGGTGCTTTTGATTGCCTGCGCCAACGTCGCCAACCTGCTGCTCGCCCGCTCGGCATCGCGGCAGAAGGAGT TCGCCGTTCGCGCATCACTGGGTGCCAGCCGCGGCCGGCTCGTGCAGCAATTGCTCACGGAGAGCCTCACTCTGGCCCTG CTCGGCGGGTTGCTCGGAACCGCCGTTGCGTATTGGGGCTTGAAGGGGCTGGTGGGCGCGGTGCCGAATCTGCTGCGCGC CGGCATGCCGTTTCTTGACGGTCTCAGCCTGCATTGGGGAATGCTCGCTTTCACCGCTGCGGTCTCGGTGGCCACCGGCG TTCTCTTCGGCCTCGCGCCGGCGCTGCGCATGTCCCGAGGAAATTTTCAGCCCGCGCTCCAGGCCGGCCGCCGCACCTCC GCAAGCGGCGAGCACCAGAGGCTCCGCCGCATTCTCCTGGTTTCCGAAGTCGCCGTCTCCCTCATGCTCCTGATCGGCGC CGGACTCATGATGAAGAGCACCGCGCGCCTGCTGGCCGTGGACCCGGGCTTCCGTCCGCAGAACCTCCTGACCATGCAGG TGGCGGTTCCCGGTGTCCGCTACCAGACGCGGGACCTGCAGAACAGTTTCTGGGCGCGCCTGCTGGGGCGCATCGAAGCC CTTCCAGGCGTCAGCGCGGCCGGCACCGTGAGCATCCTGCCGCTCGGCGGCGGTGGCAACACCGGGACGATGCGAGTTCC GGGCCGTCCCGAAACCGCCTTGCATCCGTGGGAAGTCAACGTGCGCACCATCAGCCGCGGCTACCTGCCCGCGATGGGCG TCCCGCTGCTCTCCGGGCGCGCCTTCGACGTCCACGACATCACCGGCGCTCCGCAAGTCGCCATGATCAACCAGACGCTC GCCCGCATCGCCTTCCCCAACCAGGATCCAATCGGCAAACAGATCGAGTTCGAATGGAGCGGTGGTCCCTTGCAGGTGGT CGGCGTAACCGCCGATGAAAATACCCAGAGCCTGGACAGCTCGATTCGCCCGGTGGTCTATTTTCCGGACCTGCAGAGTG GGGCGACAGTAGTCAACATCGTGGTGCGCACCGCCGCCGCGCCCATGTCGTTGAGCCGCGCCATCCGCGGCGAAGCCCAG GCGCTCGACCCGGAGGCAGCCGTCTATCTGATGCAGACCATGGAGCAGGTCATCGCCGATTCTCCTGCCACCTTCACGCG CCGCTATCCCGCGCTGCTGATGGGATTGTTCGCCGCCATCGCCCTGGTGATGGCGGTCGTGGGGACCTACGGATTGGTGG CCTACGCGGTGACGCTGCGGACGCACGAGATCGGTATCCGGATCGCGCTCGGCGCGAGCCGCGCCGACATCCTGCGGCTG GTGATCGGCCAGGGAATCATGCTCGTGCTGGCAGGCGTCGCCATCGGCCTCGCCGGCGCCGCGCTCTTGAGCCGCGCTTT GGCCAAGCTGCTCTTCGGCGTGCAACCACTCGACCCGGCCGTTTTCGCGCTGGTCTCCGCCATCCTTCTCGCGTCCGCGA TCCTCGCCAGCTACATCCCCGCGCGCCGCGCCCTGGCCGTCGAGCCCGGCATCGCCCTGTCGAGCGAGTAG
Upstream 100 bases:
>100_bases ACCAGATCACCGCTTCCGGACGCGCTCAATTGCAGCGCGAGGTCTCCAGTTTCGAACGCCTCCTGAAAGGCATCACGCAG GTGATGAACCCGGCCGAGTC
Downstream 100 bases:
>100_bases CAGCCCGCGAAGATTTCTCCGGGAGCGATCGCTTTTTGCGGCTCGCCACCTCGAATTGCCGTGCATTTGTCCGCTCGCAA GCCGCAAACAGCCGCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 876; Mature: 876
Protein sequence:
>876_residues MKRLFRLFRRSAADRELAGEMRAHFEEKVDELMEAGMSRHAALKEARRRFGNVTSAAERSRDIWAYPFLENLLHDFRYAL RSLAQKPMFAAVVVLPLALGIGANTAIFTIVDAALIRALPYRQPDRLVHLFEVKENGEDPHEASYPDLQDWARAHQYVES LGAYVSYGLGATLSGSGQPERIVIAGASPGFFPLLGVQAALGRTFLPDEDQPGASRVAVLSDSLWRRRFGADPAIVGKTI LLNSRQAMVVGVLPPDFQFAPVGEADLWMAAFPSPNQRQRRYWHWIQAIARLKPGATVAQAQAEMSGIAREIIRQDPKHT GTTIAVKPLHDVVVGNVRPVLLVLLGTIALVLLIACANVANLLLARSASRQKEFAVRASLGASRGRLVQQLLTESLTLAL LGGLLGTAVAYWGLKGLVGAVPNLLRAGMPFLDGLSLHWGMLAFTAAVSVATGVLFGLAPALRMSRGNFQPALQAGRRTS ASGEHQRLRRILLVSEVAVSLMLLIGAGLMMKSTARLLAVDPGFRPQNLLTMQVAVPGVRYQTRDLQNSFWARLLGRIEA LPGVSAAGTVSILPLGGGGNTGTMRVPGRPETALHPWEVNVRTISRGYLPAMGVPLLSGRAFDVHDITGAPQVAMINQTL ARIAFPNQDPIGKQIEFEWSGGPLQVVGVTADENTQSLDSSIRPVVYFPDLQSGATVVNIVVRTAAAPMSLSRAIRGEAQ ALDPEAAVYLMQTMEQVIADSPATFTRRYPALLMGLFAAIALVMAVVGTYGLVAYAVTLRTHEIGIRIALGASRADILRL VIGQGIMLVLAGVAIGLAGAALLSRALAKLLFGVQPLDPAVFALVSAILLASAILASYIPARRALAVEPGIALSSE
Sequences:
>Translated_876_residues MKRLFRLFRRSAADRELAGEMRAHFEEKVDELMEAGMSRHAALKEARRRFGNVTSAAERSRDIWAYPFLENLLHDFRYAL RSLAQKPMFAAVVVLPLALGIGANTAIFTIVDAALIRALPYRQPDRLVHLFEVKENGEDPHEASYPDLQDWARAHQYVES LGAYVSYGLGATLSGSGQPERIVIAGASPGFFPLLGVQAALGRTFLPDEDQPGASRVAVLSDSLWRRRFGADPAIVGKTI LLNSRQAMVVGVLPPDFQFAPVGEADLWMAAFPSPNQRQRRYWHWIQAIARLKPGATVAQAQAEMSGIAREIIRQDPKHT GTTIAVKPLHDVVVGNVRPVLLVLLGTIALVLLIACANVANLLLARSASRQKEFAVRASLGASRGRLVQQLLTESLTLAL LGGLLGTAVAYWGLKGLVGAVPNLLRAGMPFLDGLSLHWGMLAFTAAVSVATGVLFGLAPALRMSRGNFQPALQAGRRTS ASGEHQRLRRILLVSEVAVSLMLLIGAGLMMKSTARLLAVDPGFRPQNLLTMQVAVPGVRYQTRDLQNSFWARLLGRIEA LPGVSAAGTVSILPLGGGGNTGTMRVPGRPETALHPWEVNVRTISRGYLPAMGVPLLSGRAFDVHDITGAPQVAMINQTL ARIAFPNQDPIGKQIEFEWSGGPLQVVGVTADENTQSLDSSIRPVVYFPDLQSGATVVNIVVRTAAAPMSLSRAIRGEAQ ALDPEAAVYLMQTMEQVIADSPATFTRRYPALLMGLFAAIALVMAVVGTYGLVAYAVTLRTHEIGIRIALGASRADILRL VIGQGIMLVLAGVAIGLAGAALLSRALAKLLFGVQPLDPAVFALVSAILLASAILASYIPARRALAVEPGIALSSE >Mature_876_residues MKRLFRLFRRSAADRELAGEMRAHFEEKVDELMEAGMSRHAALKEARRRFGNVTSAAERSRDIWAYPFLENLLHDFRYAL RSLAQKPMFAAVVVLPLALGIGANTAIFTIVDAALIRALPYRQPDRLVHLFEVKENGEDPHEASYPDLQDWARAHQYVES LGAYVSYGLGATLSGSGQPERIVIAGASPGFFPLLGVQAALGRTFLPDEDQPGASRVAVLSDSLWRRRFGADPAIVGKTI LLNSRQAMVVGVLPPDFQFAPVGEADLWMAAFPSPNQRQRRYWHWIQAIARLKPGATVAQAQAEMSGIAREIIRQDPKHT GTTIAVKPLHDVVVGNVRPVLLVLLGTIALVLLIACANVANLLLARSASRQKEFAVRASLGASRGRLVQQLLTESLTLAL LGGLLGTAVAYWGLKGLVGAVPNLLRAGMPFLDGLSLHWGMLAFTAAVSVATGVLFGLAPALRMSRGNFQPALQAGRRTS ASGEHQRLRRILLVSEVAVSLMLLIGAGLMMKSTARLLAVDPGFRPQNLLTMQVAVPGVRYQTRDLQNSFWARLLGRIEA LPGVSAAGTVSILPLGGGGNTGTMRVPGRPETALHPWEVNVRTISRGYLPAMGVPLLSGRAFDVHDITGAPQVAMINQTL ARIAFPNQDPIGKQIEFEWSGGPLQVVGVTADENTQSLDSSIRPVVYFPDLQSGATVVNIVVRTAAAPMSLSRAIRGEAQ ALDPEAAVYLMQTMEQVIADSPATFTRRYPALLMGLFAAIALVMAVVGTYGLVAYAVTLRTHEIGIRIALGASRADILRL VIGQGIMLVLAGVAIGLAGAALLSRALAKLLFGVQPLDPAVFALVSAILLASAILASYIPARRALAVEPGIALSSE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=290, Percent_Identity=27.5862068965517, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 93896; Mature: 93896
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFRLFRRSAADRELAGEMRAHFEEKVDELMEAGMSRHAALKEARRRFGNVTSAAERS CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHC RDIWAYPFLENLLHDFRYALRSLAQKPMFAAVVVLPLALGIGANTAIFTIVDAALIRALP CCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC YRQPDRLVHLFEVKENGEDPHEASYPDLQDWARAHQYVESLGAYVSYGLGATLSGSGQPE CCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC RIVIAGASPGFFPLLGVQAALGRTFLPDEDQPGASRVAVLSDSLWRRRFGADPAIVGKTI EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCEE LLNSRQAMVVGVLPPDFQFAPVGEADLWMAAFPSPNQRQRRYWHWIQAIARLKPGATVAQ EECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHH AQAEMSGIAREIIRQDPKHTGTTIAVKPLHDVVVGNVRPVLLVLLGTIALVLLIACANVA HHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH NLLLARSASRQKEFAVRASLGASRGRLVQQLLTESLTLALLGGLLGTAVAYWGLKGLVGA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPNLLRAGMPFLDGLSLHWGMLAFTAAVSVATGVLFGLAPALRMSRGNFQPALQAGRRTS HHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC ASGEHQRLRRILLVSEVAVSLMLLIGAGLMMKSTARLLAVDPGFRPQNLLTMQVAVPGVR CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCCCCEEEEEEECCCCC YQTRDLQNSFWARLLGRIEALPGVSAAGTVSILPLGGGGNTGTMRVPGRPETALHPWEVN CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCEEE VRTISRGYLPAMGVPLLSGRAFDVHDITGAPQVAMINQTLARIAFPNQDPIGKQIEFEWS EEEECCCCCCCCCCCHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEC GGPLQVVGVTADENTQSLDSSIRPVVYFPDLQSGATVVNIVVRTAAAPMSLSRAIRGEAQ CCCEEEEEEECCCCHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHH ALDPEAAVYLMQTMEQVIADSPATFTRRYPALLMGLFAAIALVMAVVGTYGLVAYAVTLR CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE THEIGIRIALGASRADILRLVIGQGIMLVLAGVAIGLAGAALLSRALAKLLFGVQPLDPA EEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH VFALVSAILLASAILASYIPARRALAVEPGIALSSE HHHHHHHHHHHHHHHHHHCCHHHCEEECCCCCCCCC >Mature Secondary Structure MKRLFRLFRRSAADRELAGEMRAHFEEKVDELMEAGMSRHAALKEARRRFGNVTSAAERS CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHC RDIWAYPFLENLLHDFRYALRSLAQKPMFAAVVVLPLALGIGANTAIFTIVDAALIRALP CCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC YRQPDRLVHLFEVKENGEDPHEASYPDLQDWARAHQYVESLGAYVSYGLGATLSGSGQPE CCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC RIVIAGASPGFFPLLGVQAALGRTFLPDEDQPGASRVAVLSDSLWRRRFGADPAIVGKTI EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCEE LLNSRQAMVVGVLPPDFQFAPVGEADLWMAAFPSPNQRQRRYWHWIQAIARLKPGATVAQ EECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHH AQAEMSGIAREIIRQDPKHTGTTIAVKPLHDVVVGNVRPVLLVLLGTIALVLLIACANVA HHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH NLLLARSASRQKEFAVRASLGASRGRLVQQLLTESLTLALLGGLLGTAVAYWGLKGLVGA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPNLLRAGMPFLDGLSLHWGMLAFTAAVSVATGVLFGLAPALRMSRGNFQPALQAGRRTS HHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC ASGEHQRLRRILLVSEVAVSLMLLIGAGLMMKSTARLLAVDPGFRPQNLLTMQVAVPGVR CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCCCCEEEEEEECCCCC YQTRDLQNSFWARLLGRIEALPGVSAAGTVSILPLGGGGNTGTMRVPGRPETALHPWEVN CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCEEE VRTISRGYLPAMGVPLLSGRAFDVHDITGAPQVAMINQTLARIAFPNQDPIGKQIEFEWS EEEECCCCCCCCCCCHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEC GGPLQVVGVTADENTQSLDSSIRPVVYFPDLQSGATVVNIVVRTAAAPMSLSRAIRGEAQ CCCEEEEEEECCCCHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHH ALDPEAAVYLMQTMEQVIADSPATFTRRYPALLMGLFAAIALVMAVVGTYGLVAYAVTLR CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE THEIGIRIALGASRADILRLVIGQGIMLVLAGVAIGLAGAALLSRALAKLLFGVQPLDPA EEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH VFALVSAILLASAILASYIPARRALAVEPGIALSSE HHHHHHHHHHHHHHHHHHCCHHHCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA