| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623069
Identifier: 116623069
GI number: 116623069
Start: 5033704
End: 5034417
Strand: Direct
Name: 116623069
Synonym: Acid_3973
Alternate gene names: NA
Gene position: 5033704-5034417 (Clockwise)
Preceding gene: 116623063
Following gene: 116623073
Centisome position: 50.51
GC content: 66.95
Gene sequence:
>714_bases ATGCGGGAAGCCGTTTCCCATCTCCCCGATTACACCTGCCGCGTCACGCTGGAACGTTCTTCGCGCCGCAATCCCCGCGC CCAATTCGAACTGGCCGATCGCATCCGCCTCGAAGTCGCTTATACCGGCGGCCAGGAGCTCTACTCGTGGCCGGGCGACG ATCGCTTCGAAGCCGGCATCGAAGATCTCCTCCCGGGTCACGGCATGGTGTCAAACGGCAGCTATGCCCTGCACATGCGT AACCTCTTCGTCCGCGACGTGGCATCATTCTCCGCCCCGCGCGACGAGCGCTGCGAAGACCGCCCCTGCGTGCGCCTGGA ATTCGAAATCCCCGCCGCGCGCAGCGGCTACTCCGTCTCCGCCGGCGATGCCGCCGCCACTGTGCCGCTGACCGGTTCCA CCTGGTTCGACCCCGGCTCGCTCGACATCCTCCGCCTCGAAGTCCGCGTCGATCGCACCCCGCGCTCGGTCCGCATCGCC GCCACACGCGAAACCACCATCTACACCCACGCCCGCATCGGCGAGATCGATACAGTCCTGCCCGCGTCCTCGGAACTGGT TCTCCACGACCGCAACGGCCTCGAAGCCATGAACCGTTCCACCTTCGATCACTACCGCCGCTACTCCGGCTCCGCAACCG TCTTCTACGACGCAGCCGCGCCCCCGCCGCCCCGAAGCCTGCCCCCCAACCCCCACCGCCCGCAAAAGACTTGA
Upstream 100 bases:
>100_bases GACGAGGACGATTTTTAAACCCGCGCAGGCGCTCCTGCTCTGGCTCTGCGCAGCCGGCGCCGCCGCCCAACCCGCCCTCG TGGACCGGATTCGCGACCAC
Downstream 100 bases:
>100_bases CCGCGACCCTGGACGCCGCGTTAGACGCCGATGCCGCCATCGGAGACCAGGTCCCCCTGACCACCCGCGAAGGCCTCCAC TACAGCGCCCGCATCACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MREAVSHLPDYTCRVTLERSSRRNPRAQFELADRIRLEVAYTGGQELYSWPGDDRFEAGIEDLLPGHGMVSNGSYALHMR NLFVRDVASFSAPRDERCEDRPCVRLEFEIPAARSGYSVSAGDAAATVPLTGSTWFDPGSLDILRLEVRVDRTPRSVRIA ATRETTIYTHARIGEIDTVLPASSELVLHDRNGLEAMNRSTFDHYRRYSGSATVFYDAAAPPPPRSLPPNPHRPQKT
Sequences:
>Translated_237_residues MREAVSHLPDYTCRVTLERSSRRNPRAQFELADRIRLEVAYTGGQELYSWPGDDRFEAGIEDLLPGHGMVSNGSYALHMR NLFVRDVASFSAPRDERCEDRPCVRLEFEIPAARSGYSVSAGDAAATVPLTGSTWFDPGSLDILRLEVRVDRTPRSVRIA ATRETTIYTHARIGEIDTVLPASSELVLHDRNGLEAMNRSTFDHYRRYSGSATVFYDAAAPPPPRSLPPNPHRPQKT >Mature_237_residues MREAVSHLPDYTCRVTLERSSRRNPRAQFELADRIRLEVAYTGGQELYSWPGDDRFEAGIEDLLPGHGMVSNGSYALHMR NLFVRDVASFSAPRDERCEDRPCVRLEFEIPAARSGYSVSAGDAAATVPLTGSTWFDPGSLDILRLEVRVDRTPRSVRIA ATRETTIYTHARIGEIDTVLPASSELVLHDRNGLEAMNRSTFDHYRRYSGSATVFYDAAAPPPPRSLPPNPHRPQKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26544; Mature: 26544
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREAVSHLPDYTCRVTLERSSRRNPRAQFELADRIRLEVAYTGGQELYSWPGDDRFEAGI CCCHHHHCCCCEEEEEEECCCCCCCCCEEEEECEEEEEEEEECCCCEECCCCCCHHHHCH EDLLPGHGMVSNGSYALHMRNLFVRDVASFSAPRDERCEDRPCVRLEFEIPAARSGYSVS HHHCCCCCEECCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEE AGDAAATVPLTGSTWFDPGSLDILRLEVRVDRTPRSVRIAATRETTIYTHARIGEIDTVL CCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCEEEEEEEECCCCCEEC PASSELVLHDRNGLEAMNRSTFDHYRRYSGSATVFYDAAAPPPPRSLPPNPHRPQKT CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MREAVSHLPDYTCRVTLERSSRRNPRAQFELADRIRLEVAYTGGQELYSWPGDDRFEAGI CCCHHHHCCCCEEEEEEECCCCCCCCCEEEEECEEEEEEEEECCCCEECCCCCCHHHHCH EDLLPGHGMVSNGSYALHMRNLFVRDVASFSAPRDERCEDRPCVRLEFEIPAARSGYSVS HHHCCCCCEECCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEE AGDAAATVPLTGSTWFDPGSLDILRLEVRVDRTPRSVRIAATRETTIYTHARIGEIDTVL CCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCEEEEEEEECCCCCEEC PASSELVLHDRNGLEAMNRSTFDHYRRYSGSATVFYDAAAPPPPRSLPPNPHRPQKT CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA