Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116623069

Identifier: 116623069

GI number: 116623069

Start: 5033704

End: 5034417

Strand: Direct

Name: 116623069

Synonym: Acid_3973

Alternate gene names: NA

Gene position: 5033704-5034417 (Clockwise)

Preceding gene: 116623063

Following gene: 116623073

Centisome position: 50.51

GC content: 66.95

Gene sequence:

>714_bases
ATGCGGGAAGCCGTTTCCCATCTCCCCGATTACACCTGCCGCGTCACGCTGGAACGTTCTTCGCGCCGCAATCCCCGCGC
CCAATTCGAACTGGCCGATCGCATCCGCCTCGAAGTCGCTTATACCGGCGGCCAGGAGCTCTACTCGTGGCCGGGCGACG
ATCGCTTCGAAGCCGGCATCGAAGATCTCCTCCCGGGTCACGGCATGGTGTCAAACGGCAGCTATGCCCTGCACATGCGT
AACCTCTTCGTCCGCGACGTGGCATCATTCTCCGCCCCGCGCGACGAGCGCTGCGAAGACCGCCCCTGCGTGCGCCTGGA
ATTCGAAATCCCCGCCGCGCGCAGCGGCTACTCCGTCTCCGCCGGCGATGCCGCCGCCACTGTGCCGCTGACCGGTTCCA
CCTGGTTCGACCCCGGCTCGCTCGACATCCTCCGCCTCGAAGTCCGCGTCGATCGCACCCCGCGCTCGGTCCGCATCGCC
GCCACACGCGAAACCACCATCTACACCCACGCCCGCATCGGCGAGATCGATACAGTCCTGCCCGCGTCCTCGGAACTGGT
TCTCCACGACCGCAACGGCCTCGAAGCCATGAACCGTTCCACCTTCGATCACTACCGCCGCTACTCCGGCTCCGCAACCG
TCTTCTACGACGCAGCCGCGCCCCCGCCGCCCCGAAGCCTGCCCCCCAACCCCCACCGCCCGCAAAAGACTTGA

Upstream 100 bases:

>100_bases
GACGAGGACGATTTTTAAACCCGCGCAGGCGCTCCTGCTCTGGCTCTGCGCAGCCGGCGCCGCCGCCCAACCCGCCCTCG
TGGACCGGATTCGCGACCAC

Downstream 100 bases:

>100_bases
CCGCGACCCTGGACGCCGCGTTAGACGCCGATGCCGCCATCGGAGACCAGGTCCCCCTGACCACCCGCGAAGGCCTCCAC
TACAGCGCCCGCATCACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MREAVSHLPDYTCRVTLERSSRRNPRAQFELADRIRLEVAYTGGQELYSWPGDDRFEAGIEDLLPGHGMVSNGSYALHMR
NLFVRDVASFSAPRDERCEDRPCVRLEFEIPAARSGYSVSAGDAAATVPLTGSTWFDPGSLDILRLEVRVDRTPRSVRIA
ATRETTIYTHARIGEIDTVLPASSELVLHDRNGLEAMNRSTFDHYRRYSGSATVFYDAAAPPPPRSLPPNPHRPQKT

Sequences:

>Translated_237_residues
MREAVSHLPDYTCRVTLERSSRRNPRAQFELADRIRLEVAYTGGQELYSWPGDDRFEAGIEDLLPGHGMVSNGSYALHMR
NLFVRDVASFSAPRDERCEDRPCVRLEFEIPAARSGYSVSAGDAAATVPLTGSTWFDPGSLDILRLEVRVDRTPRSVRIA
ATRETTIYTHARIGEIDTVLPASSELVLHDRNGLEAMNRSTFDHYRRYSGSATVFYDAAAPPPPRSLPPNPHRPQKT
>Mature_237_residues
MREAVSHLPDYTCRVTLERSSRRNPRAQFELADRIRLEVAYTGGQELYSWPGDDRFEAGIEDLLPGHGMVSNGSYALHMR
NLFVRDVASFSAPRDERCEDRPCVRLEFEIPAARSGYSVSAGDAAATVPLTGSTWFDPGSLDILRLEVRVDRTPRSVRIA
ATRETTIYTHARIGEIDTVLPASSELVLHDRNGLEAMNRSTFDHYRRYSGSATVFYDAAAPPPPRSLPPNPHRPQKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26544; Mature: 26544

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREAVSHLPDYTCRVTLERSSRRNPRAQFELADRIRLEVAYTGGQELYSWPGDDRFEAGI
CCCHHHHCCCCEEEEEEECCCCCCCCCEEEEECEEEEEEEEECCCCEECCCCCCHHHHCH
EDLLPGHGMVSNGSYALHMRNLFVRDVASFSAPRDERCEDRPCVRLEFEIPAARSGYSVS
HHHCCCCCEECCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEE
AGDAAATVPLTGSTWFDPGSLDILRLEVRVDRTPRSVRIAATRETTIYTHARIGEIDTVL
CCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCEEEEEEEECCCCCEEC
PASSELVLHDRNGLEAMNRSTFDHYRRYSGSATVFYDAAAPPPPRSLPPNPHRPQKT
CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MREAVSHLPDYTCRVTLERSSRRNPRAQFELADRIRLEVAYTGGQELYSWPGDDRFEAGI
CCCHHHHCCCCEEEEEEECCCCCCCCCEEEEECEEEEEEEEECCCCEECCCCCCHHHHCH
EDLLPGHGMVSNGSYALHMRNLFVRDVASFSAPRDERCEDRPCVRLEFEIPAARSGYSVS
HHHCCCCCEECCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEE
AGDAAATVPLTGSTWFDPGSLDILRLEVRVDRTPRSVRIAATRETTIYTHARIGEIDTVL
CCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCEEEEEEEECCCCCEEC
PASSELVLHDRNGLEAMNRSTFDHYRRYSGSATVFYDAAAPPPPRSLPPNPHRPQKT
CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA