| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116623063
Identifier: 116623063
GI number: 116623063
Start: 5028707
End: 5029570
Strand: Direct
Name: 116623063
Synonym: Acid_3967
Alternate gene names: NA
Gene position: 5028707-5029570 (Clockwise)
Preceding gene: 116623062
Following gene: 116623069
Centisome position: 50.46
GC content: 60.3
Gene sequence:
>864_bases ATGAATCAACGTCAATTACTCTGCTCATCCTGGAAACCGGTCCGCCGGATTCTGCTTGCATCCATTTTCGCCGCGGGCAT GGCCACTCAGGCCTTCGCGGGATTTATCGTCTTTGAAGGTACCGGTGCGAACCCAGCGGCGATTACGCCGACTCGCGATG CCTTCCGTACCGCGGTCGGAGGCGGGACCGCCGCCGGGGCCAATGGCGATTTCGGCGGTGTGCGCCGCGAGATCAATTGG GACGGCGTCCCCGCCGGTTCCTCGGATCCCAACCTGATGCCGGCCGATTTTTTCAATACGACCTCGCCCCGCGGCGTCGT CTTTAGCACTCCCGGAACCGGCTTTCTCGTCAGTTCCAATGCCGGCGGAGCCACACCAATCCTATTTGGCTTTCCGAATG ACTTTCAGGCCTTCAGCCCGCAGAAGCTCTTTACCGCGGTGAACAGTGACATCACCGATGTGAACTTCTTCCTGCCCGGC ACCACCACCAAAGCCACCACCACGGCCTTTGGAGTAATGTTCGTCGATGTGGAAGTTGCCGGCTCCACGCACGTCGATTT CTTTGACGCCAATAACAACTTGATCTTCACCCGGAATGCCGAGGTCGCGGGCAACCAAGGCTTCTCGTTCGTCGGCGCCG TCGCCAACGCGGGCGAACAGATCGCGCGGGTCCGCATCACCTCCGGCGCGAACACGATCGTTTCAAACGGAGTTCTCGGT GACCCGAACAGCGACATTGTAGTAATGGATGACTTCCTCTACGCGACGCCCGCTGCTGCATCTGCCCCCGAACCGGCTTC CTTCACGCTGCTCGGTGCCGGCATCCTGGCCTTCGCCTTTACCCGCAAACGTCTGAGCCGCTAA
Upstream 100 bases:
>100_bases CCCCCGTGTTAGGTAACTATCCGGACACAACATCGAATCATGTAATGCAATCGAAGCCCGCAATCGCGGGCTTCCCTATA AAATGTGAAGGCCACCAACT
Downstream 100 bases:
>100_bases CCACGCAGGACAGGTCATCCCGGCCTGTCCTGCTAATTTGCCTCTCAGCCTTTCACGCGCGGACCAATCGGCGACGCAGC CAGAAAATCCCGATCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNQRQLLCSSWKPVRRILLASIFAAGMATQAFAGFIVFEGTGANPAAITPTRDAFRTAVGGGTAAGANGDFGGVRREINW DGVPAGSSDPNLMPADFFNTTSPRGVVFSTPGTGFLVSSNAGGATPILFGFPNDFQAFSPQKLFTAVNSDITDVNFFLPG TTTKATTTAFGVMFVDVEVAGSTHVDFFDANNNLIFTRNAEVAGNQGFSFVGAVANAGEQIARVRITSGANTIVSNGVLG DPNSDIVVMDDFLYATPAAASAPEPASFTLLGAGILAFAFTRKRLSR
Sequences:
>Translated_287_residues MNQRQLLCSSWKPVRRILLASIFAAGMATQAFAGFIVFEGTGANPAAITPTRDAFRTAVGGGTAAGANGDFGGVRREINW DGVPAGSSDPNLMPADFFNTTSPRGVVFSTPGTGFLVSSNAGGATPILFGFPNDFQAFSPQKLFTAVNSDITDVNFFLPG TTTKATTTAFGVMFVDVEVAGSTHVDFFDANNNLIFTRNAEVAGNQGFSFVGAVANAGEQIARVRITSGANTIVSNGVLG DPNSDIVVMDDFLYATPAAASAPEPASFTLLGAGILAFAFTRKRLSR >Mature_287_residues MNQRQLLCSSWKPVRRILLASIFAAGMATQAFAGFIVFEGTGANPAAITPTRDAFRTAVGGGTAAGANGDFGGVRREINW DGVPAGSSDPNLMPADFFNTTSPRGVVFSTPGTGFLVSSNAGGATPILFGFPNDFQAFSPQKLFTAVNSDITDVNFFLPG TTTKATTTAFGVMFVDVEVAGSTHVDFFDANNNLIFTRNAEVAGNQGFSFVGAVANAGEQIARVRITSGANTIVSNGVLG DPNSDIVVMDDFLYATPAAASAPEPASFTLLGAGILAFAFTRKRLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29847; Mature: 29847
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRQLLCSSWKPVRRILLASIFAAGMATQAFAGFIVFEGTGANPAAITPTRDAFRTAVG CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEECCCHHHHHHHCC GGTAAGANGDFGGVRREINWDGVPAGSSDPNLMPADFFNTTSPRGVVFSTPGTGFLVSSN CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCEEEECC AGGATPILFGFPNDFQAFSPQKLFTAVNSDITDVNFFLPGTTTKATTTAFGVMFVDVEVA CCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEEEEEEC GSTHVDFFDANNNLIFTRNAEVAGNQGFSFVGAVANAGEQIARVRITSGANTIVSNGVLG CCCEEEEEECCCCEEEEECCCCCCCCCCEEHHHHHCCCCEEEEEEEECCCCEEEECCCCC DPNSDIVVMDDFLYATPAAASAPEPASFTLLGAGILAFAFTRKRLSR CCCCCEEEEECEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure MNQRQLLCSSWKPVRRILLASIFAAGMATQAFAGFIVFEGTGANPAAITPTRDAFRTAVG CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEECCCHHHHHHHCC GGTAAGANGDFGGVRREINWDGVPAGSSDPNLMPADFFNTTSPRGVVFSTPGTGFLVSSN CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCEEEECC AGGATPILFGFPNDFQAFSPQKLFTAVNSDITDVNFFLPGTTTKATTTAFGVMFVDVEVA CCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEEEEEEC GSTHVDFFDANNNLIFTRNAEVAGNQGFSFVGAVANAGEQIARVRITSGANTIVSNGVLG CCCEEEEEECCCCEEEEECCCCCCCCCCEEHHHHHCCCCEEEEEEEECCCCEEEECCCCC DPNSDIVVMDDFLYATPAAASAPEPASFTLLGAGILAFAFTRKRLSR CCCCCEEEEECEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA