| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623062
Identifier: 116623062
GI number: 116623062
Start: 5027927
End: 5028538
Strand: Direct
Name: 116623062
Synonym: Acid_3966
Alternate gene names: NA
Gene position: 5027927-5028538 (Clockwise)
Preceding gene: 116623061
Following gene: 116623063
Centisome position: 50.45
GC content: 60.62
Gene sequence:
>612_bases ATGGCCCACGCGCAGCTACAACTGCCGGGAACGAGTGTTACCCCTCCGCCCACGCCCACTCTGATCACTCCGCCGGCCGG AAATGCCGCGTTCCTGTTAGGCCACGCATTGGGTACTCAAGGCTACGTTTGCTTGCCCACCGAAGCCGGCGCTTCCACCG CATCCTGGACAGTCAACTCTGCCCGTCCCGAAGCCACGCTCTTTCAGACGTTCTTCGATCAGGATGTCCAGATCGTCACT CACTTCCTGAGCCCCGATACCAACCCCAATGACGCTGCTCCTATCCCGTTGCCCTTCGGCAGCGCGACGTGGCAGAGTTC CTTCGATAGCAGCAAAGTGTGGGCTGCGGTTCTGCATAAGAACCAGATTGCGGCCGGCACCGATAAGGCGAGTTGCCCCA ACGATGGCGCCATTCCCTGCCTCTTACTGCAGTCTATCGGCTCTCAGGCGGGTCCGACCGGCGGCAAGACACTTTCGAAG ACCACCTTCGTCCAACGCTTGAACACCAGGGGAGGATCGGCTCCCGCCGACGGTTGCGCTACATCCACCGATGTGGGCAA ACAGGTGCTCGTGCCCTACACTGCCGACTACTACTTCTATACCGCTCGGTAG
Upstream 100 bases:
>100_bases AAACTGGAGAAAGCACAAAGACATGTATCAATTCAAGAAGACTACGCAAGTTCACAGGATGCTGGTAGCTACGGTCGCGT TGGCAGGTGCATTCGGCACC
Downstream 100 bases:
>100_bases TCTTTGAGTTCCTGTAAGCAGGATTGGGGGAGCCGTTACAGGCGGTCTGAGATCGTCTTAACCGGACTCCCCCGTGTTAG GTAACTATCCGGACACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MAHAQLQLPGTSVTPPPTPTLITPPAGNAAFLLGHALGTQGYVCLPTEAGASTASWTVNSARPEATLFQTFFDQDVQIVT HFLSPDTNPNDAAPIPLPFGSATWQSSFDSSKVWAAVLHKNQIAAGTDKASCPNDGAIPCLLLQSIGSQAGPTGGKTLSK TTFVQRLNTRGGSAPADGCATSTDVGKQVLVPYTADYYFYTAR
Sequences:
>Translated_203_residues MAHAQLQLPGTSVTPPPTPTLITPPAGNAAFLLGHALGTQGYVCLPTEAGASTASWTVNSARPEATLFQTFFDQDVQIVT HFLSPDTNPNDAAPIPLPFGSATWQSSFDSSKVWAAVLHKNQIAAGTDKASCPNDGAIPCLLLQSIGSQAGPTGGKTLSK TTFVQRLNTRGGSAPADGCATSTDVGKQVLVPYTADYYFYTAR >Mature_202_residues AHAQLQLPGTSVTPPPTPTLITPPAGNAAFLLGHALGTQGYVCLPTEAGASTASWTVNSARPEATLFQTFFDQDVQIVTH FLSPDTNPNDAAPIPLPFGSATWQSSFDSSKVWAAVLHKNQIAAGTDKASCPNDGAIPCLLLQSIGSQAGPTGGKTLSKT TFVQRLNTRGGSAPADGCATSTDVGKQVLVPYTADYYFYTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21125; Mature: 20994
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAQLQLPGTSVTPPPTPTLITPPAGNAAFLLGHALGTQGYVCLPTEAGASTASWTVNS CCCCEEECCCCCCCCCCCCCEEECCCCCEEEEEEEHHCCCCEEEEECCCCCCCEEEEECC ARPEATLFQTFFDQDVQIVTHFLSPDTNPNDAAPIPLPFGSATWQSSFDSSKVWAAVLHK CCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC NQIAAGTDKASCPNDGAIPCLLLQSIGSQAGPTGGKTLSKTTFVQRLNTRGGSAPADGCA CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC TSTDVGKQVLVPYTADYYFYTAR CCCCCCCEEEEEEECCEEEEECC >Mature Secondary Structure AHAQLQLPGTSVTPPPTPTLITPPAGNAAFLLGHALGTQGYVCLPTEAGASTASWTVNS CCCEEECCCCCCCCCCCCCEEECCCCCEEEEEEEHHCCCCEEEEECCCCCCCEEEEECC ARPEATLFQTFFDQDVQIVTHFLSPDTNPNDAAPIPLPFGSATWQSSFDSSKVWAAVLHK CCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC NQIAAGTDKASCPNDGAIPCLLLQSIGSQAGPTGGKTLSKTTFVQRLNTRGGSAPADGCA CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC TSTDVGKQVLVPYTADYYFYTAR CCCCCCCEEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA