| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622997
Identifier: 116622997
GI number: 116622997
Start: 4931457
End: 4933736
Strand: Direct
Name: 116622997
Synonym: Acid_3901
Alternate gene names: NA
Gene position: 4931457-4933736 (Clockwise)
Preceding gene: 116622996
Following gene: 116622998
Centisome position: 49.48
GC content: 63.82
Gene sequence:
>2280_bases ATGAAGCTCCTCCTCCTTTTCGCCTTTCTCCCCGTCGCCTACTCTCAGTCCCCCCTGACCCTGTGGTACACCCACCCCGC CGACATCTGGACCGACGCCCTTCCCGTCGGCAACGGCCGCATGGGTGCCATGGTCTTCGGCGGAGCCGCCCACGAACGCA TCCAGTTCAACGAGCAGACCGTCTGGACCGGCGAGCCCCACGACTACGCCCACAAGGGCGCGTCCAAATCACTCCAGCAG ATCCGCGAGCTGCTGTGGGCCGGCAAACAAAAGGAGGCCGAAGCCCTCGCCATGACGGAGTTCATGAGCGAGCCCCTCCA CCAGAAGGCCTACCAGGCGCTCGGCGATCTCATCATCGAAACCCCCGGCGCAGAAACTCCCACCGCCTACAAACGCTCGC TCGATCTCGACACCGGCATCGCCGTCACCGAGTTCACCGCCAACGGCATCACCTACCGCCGCGAAGTCTTCGCCAGCCAT CCGGCCAGCGCCATCGTCGTCCACCTCACTTCCAGCCAGCCGGCGGAGTTCTCCGCCACACTGAAGTGCGCGCACGCAGC CTGCAAAGGCGGCGCCACCATGAGCGGCCAGGTCGAAAATTCAGCCATCCGCTTCGATTCGCGCCTCGAAAAGCACATCG ACAGCCCCACCTCCGCCACTCTCCTTCTCACCGCCGCCACCAACTTCAAAACCTACCAGGACGTCACCGCCGATCCCGTG CAGCGCAACCTCGCCACGCTCGTCGCCATCGGCAACAAGTCTTACGACGCCCTCCGCGCTGAGCACATTCGCGATCACCA GTCCCTCTTCCGCCGCGTCACGCTCGATCTCGGTGCCACCGCCGCATCCCAACTCCCCACAGACGAACGCATCGCCGCCT TCGCCAAAGGCAGCGACCCCGCCCTGATCACGCTGCTCTTCCAGTTCGGCCGCTATCTCATGATCGGCTCCAGCCGCCCG GGCGGACAGCCCGCCAACCTGCAAGGCCTCTGGAACGAGTCCAATACACCCGCCTGGGACAGCAAGTACACCGATAACAT CAACACCGAAATGAACTACTGGCCCGTCGAAGAGACCAATCTCTCCGAGTGCCACCTGCCCCTGTTCGACGCCCTGAAAG ACCTCGCGCAATCCGGCGCCATCACGGCCAGGGAACAGTACAACGCGCGCGGCTGGGTCCTGCATCACAACTTCGATCTC TGGCGCGGCACCGCCCCCATCAACGCCAGCAACCACGGCATTTGGCAGACCGGCGGCGCCTGGCTCTCCACCCACCTCTG GGAGCACTACCTCTTCACCGGCGATCGCGAATTCCTCCGCGCCGCCGCCTACCCGCTCATGAAAGGCGCGTCCACGTTCT TCATCGACGCGCTGGTAAAAGATCCCAAAACCGGCTTCCTCTACACCGGCCCCAGCAACTCACCCGAACAGGGCGGCCTC GTCATGGGCCCTACCATGGATCGCGAAATCGTCCGCTCCCTCTTCGGTGAAACCATCGCCGCCGCCAAGATTCTCAATCT CGACCCCGCCCTGCAGGAGCAGCTCGCCACCCTGCGCAAACAAATCGCGCCCCTTCAAATCGGCAAGTATGGCCAGCTGC AGGAGTGGATGGAAGATGTTGACGACCCCAAGAACGAGCACCGCCACGTCTCCCACCTGTGGGCCGTCTACCCCGGCAGC GAGGTCACGCCCTACGGAACGCCCGAGCTCTTCAAAGCCGCCCGCCAATCCCTGATCTTCCGCGGCGACGCCGCCACCGG CTGGTCCATGGGCTGGAAGCTCAATCTCTGGGCACGCTTCCTGGATGGCGATCACGCCTACAAGATCCTGCAAAACCTGC TCGCGCCCGCGAACGATGGCAACAGGGCGCTCAAGATTCCCGCCCATCCCGGCGTGTTCAAAAACATGTTTGACGCCCAT CCGCCCTTCCAGATCGATGGCAACTTCGGCGCCACCGCCGGCATCACCGAAATGCTGCTGCAAAGCGACGATCCGTATGC CACGCCCACCAGCCTGACGCCCGTGCAATCGGGCGCGGCGGGCTTCCTGCATTTGCTGCCTGCGCTGCCTTCCGCCCTCC CCGATGGCAAGGTCACCGGCCTCCTCGCGCGGGGCGGCTTCGAAGTTTCCCTCAACTGGAAAGCCGGGAAACTCGTGACC GCCACCATCACCGCGCACCAGGCGAAACCCCTCAAAGTGCGCTACGCCGGCAAGGAAATCGAGCTGCTTACCCGGCCTCG CCAGACCATAACTCTCGGTCCGGATCTTAAAGTATTGTAA
Upstream 100 bases:
>100_bases TGTCATCACCAGCCGCGATCTCTCCCCCGTCCCCATCAAAAGCTAACCCCTGTGGGACAGGCCTCCCGGCCTGTCCCACT AATCAGTTTATTGTTTCCTT
Downstream 100 bases:
>100_bases ATGCCGCGGCCTGTTATAATCACACGCGAAGAGGAGCTTCGCAGTGTCAGATTCCACAACCCGCAGATTCTTTCTTGGGG CCGTTACGGCCGCCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Large Secreted Protein; Fibronectin Type III Domain Protein; Twin-Arginine Translocation Pathway Signal; Glycoside Hydrolase Family Protein; Six-Hairpin Glycosidase; 1 2-Alpha-L-Fucosidase; Alpha/Beta Hydrolase Domain-Containing Protein; Alpha-Fucosidase; Trehalose And Maltose Hydrolase-Like Protein; Fibronectin Type III Domain-Containing Protein; 1 2-A-L-Fucosidase; Ricin B Lectin; Coagulation Factor 5/8 Type Domain-Containing Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; Candidate Alpha-L-Fucosidase; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MKLLLLFAFLPVAYSQSPLTLWYTHPADIWTDALPVGNGRMGAMVFGGAAHERIQFNEQTVWTGEPHDYAHKGASKSLQQ IRELLWAGKQKEAEALAMTEFMSEPLHQKAYQALGDLIIETPGAETPTAYKRSLDLDTGIAVTEFTANGITYRREVFASH PASAIVVHLTSSQPAEFSATLKCAHAACKGGATMSGQVENSAIRFDSRLEKHIDSPTSATLLLTAATNFKTYQDVTADPV QRNLATLVAIGNKSYDALRAEHIRDHQSLFRRVTLDLGATAASQLPTDERIAAFAKGSDPALITLLFQFGRYLMIGSSRP GGQPANLQGLWNESNTPAWDSKYTDNINTEMNYWPVEETNLSECHLPLFDALKDLAQSGAITAREQYNARGWVLHHNFDL WRGTAPINASNHGIWQTGGAWLSTHLWEHYLFTGDREFLRAAAYPLMKGASTFFIDALVKDPKTGFLYTGPSNSPEQGGL VMGPTMDREIVRSLFGETIAAAKILNLDPALQEQLATLRKQIAPLQIGKYGQLQEWMEDVDDPKNEHRHVSHLWAVYPGS EVTPYGTPELFKAARQSLIFRGDAATGWSMGWKLNLWARFLDGDHAYKILQNLLAPANDGNRALKIPAHPGVFKNMFDAH PPFQIDGNFGATAGITEMLLQSDDPYATPTSLTPVQSGAAGFLHLLPALPSALPDGKVTGLLARGGFEVSLNWKAGKLVT ATITAHQAKPLKVRYAGKEIELLTRPRQTITLGPDLKVL
Sequences:
>Translated_759_residues MKLLLLFAFLPVAYSQSPLTLWYTHPADIWTDALPVGNGRMGAMVFGGAAHERIQFNEQTVWTGEPHDYAHKGASKSLQQ IRELLWAGKQKEAEALAMTEFMSEPLHQKAYQALGDLIIETPGAETPTAYKRSLDLDTGIAVTEFTANGITYRREVFASH PASAIVVHLTSSQPAEFSATLKCAHAACKGGATMSGQVENSAIRFDSRLEKHIDSPTSATLLLTAATNFKTYQDVTADPV QRNLATLVAIGNKSYDALRAEHIRDHQSLFRRVTLDLGATAASQLPTDERIAAFAKGSDPALITLLFQFGRYLMIGSSRP GGQPANLQGLWNESNTPAWDSKYTDNINTEMNYWPVEETNLSECHLPLFDALKDLAQSGAITAREQYNARGWVLHHNFDL WRGTAPINASNHGIWQTGGAWLSTHLWEHYLFTGDREFLRAAAYPLMKGASTFFIDALVKDPKTGFLYTGPSNSPEQGGL VMGPTMDREIVRSLFGETIAAAKILNLDPALQEQLATLRKQIAPLQIGKYGQLQEWMEDVDDPKNEHRHVSHLWAVYPGS EVTPYGTPELFKAARQSLIFRGDAATGWSMGWKLNLWARFLDGDHAYKILQNLLAPANDGNRALKIPAHPGVFKNMFDAH PPFQIDGNFGATAGITEMLLQSDDPYATPTSLTPVQSGAAGFLHLLPALPSALPDGKVTGLLARGGFEVSLNWKAGKLVT ATITAHQAKPLKVRYAGKEIELLTRPRQTITLGPDLKVL >Mature_759_residues MKLLLLFAFLPVAYSQSPLTLWYTHPADIWTDALPVGNGRMGAMVFGGAAHERIQFNEQTVWTGEPHDYAHKGASKSLQQ IRELLWAGKQKEAEALAMTEFMSEPLHQKAYQALGDLIIETPGAETPTAYKRSLDLDTGIAVTEFTANGITYRREVFASH PASAIVVHLTSSQPAEFSATLKCAHAACKGGATMSGQVENSAIRFDSRLEKHIDSPTSATLLLTAATNFKTYQDVTADPV QRNLATLVAIGNKSYDALRAEHIRDHQSLFRRVTLDLGATAASQLPTDERIAAFAKGSDPALITLLFQFGRYLMIGSSRP GGQPANLQGLWNESNTPAWDSKYTDNINTEMNYWPVEETNLSECHLPLFDALKDLAQSGAITAREQYNARGWVLHHNFDL WRGTAPINASNHGIWQTGGAWLSTHLWEHYLFTGDREFLRAAAYPLMKGASTFFIDALVKDPKTGFLYTGPSNSPEQGGL VMGPTMDREIVRSLFGETIAAAKILNLDPALQEQLATLRKQIAPLQIGKYGQLQEWMEDVDDPKNEHRHVSHLWAVYPGS EVTPYGTPELFKAARQSLIFRGDAATGWSMGWKLNLWARFLDGDHAYKILQNLLAPANDGNRALKIPAHPGVFKNMFDAH PPFQIDGNFGATAGITEMLLQSDDPYATPTSLTPVQSGAAGFLHLLPALPSALPDGKVTGLLARGGFEVSLNWKAGKLVT ATITAHQAKPLKVRYAGKEIELLTRPRQTITLGPDLKVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83329; Mature: 83329
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLLFAFLPVAYSQSPLTLWYTHPADIWTDALPVGNGRMGAMVFGGAAHERIQFNEQT CHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCEECCCCCEEEEEECCCCCCCEEECCCE VWTGEPHDYAHKGASKSLQQIRELLWAGKQKEAEALAMTEFMSEPLHQKAYQALGDLIIE EECCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHEEE TPGAETPTAYKRSLDLDTGIAVTEFTANGITYRREVFASHPASAIVVHLTSSQPAEFSAT CCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHH LKCAHAACKGGATMSGQVENSAIRFDSRLEKHIDSPTSATLLLTAATNFKTYQDVTADPV HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHCCCCCCHH QRNLATLVAIGNKSYDALRAEHIRDHQSLFRRVTLDLGATAASQLPTDERIAAFAKGSDP HHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHEEECCCCC ALITLLFQFGRYLMIGSSRPGGQPANLQGLWNESNTPAWDSKYTDNINTEMNYWPVEETN HHHHHHHHHCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCC LSECHLPLFDALKDLAQSGAITAREQYNARGWVLHHNFDLWRGTAPINASNHGIWQTGGA CCCCCCCHHHHHHHHHHCCCEEEHHHCCCCEEEEEECCHHCCCCCCCCCCCCCEEECCCH WLSTHLWEHYLFTGDREFLRAAAYPLMKGASTFFIDALVKDPKTGFLYTGPSNSPEQGGL HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCE VMGPTMDREIVRSLFGETIAAAKILNLDPALQEQLATLRKQIAPLQIGKYGQLQEWMEDV EECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH DDPKNEHRHVSHLWAVYPGSEVTPYGTPELFKAARQSLIFRGDAATGWSMGWKLNLWARF CCCHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCEEEEEEHEE LDGDHAYKILQNLLAPANDGNRALKIPAHPGVFKNMFDAHPPFQIDGNFGATAGITEMLL CCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCCCEEECCCCCCHHHHHHHHH QSDDPYATPTSLTPVQSGAAGFLHLLPALPSALPDGKVTGLLARGGFEVSLNWKAGKLVT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCEEEE ATITAHQAKPLKVRYAGKEIELLTRPRQTITLGPDLKVL EEEEECCCCCEEEEECCCEEEEEECCCCEEEECCCCCCC >Mature Secondary Structure MKLLLLFAFLPVAYSQSPLTLWYTHPADIWTDALPVGNGRMGAMVFGGAAHERIQFNEQT CHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCEECCCCCEEEEEECCCCCCCEEECCCE VWTGEPHDYAHKGASKSLQQIRELLWAGKQKEAEALAMTEFMSEPLHQKAYQALGDLIIE EECCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHEEE TPGAETPTAYKRSLDLDTGIAVTEFTANGITYRREVFASHPASAIVVHLTSSQPAEFSAT CCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHH LKCAHAACKGGATMSGQVENSAIRFDSRLEKHIDSPTSATLLLTAATNFKTYQDVTADPV HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHCCCCCCHH QRNLATLVAIGNKSYDALRAEHIRDHQSLFRRVTLDLGATAASQLPTDERIAAFAKGSDP HHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHEEECCCCC ALITLLFQFGRYLMIGSSRPGGQPANLQGLWNESNTPAWDSKYTDNINTEMNYWPVEETN HHHHHHHHHCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCC LSECHLPLFDALKDLAQSGAITAREQYNARGWVLHHNFDLWRGTAPINASNHGIWQTGGA CCCCCCCHHHHHHHHHHCCCEEEHHHCCCCEEEEEECCHHCCCCCCCCCCCCCEEECCCH WLSTHLWEHYLFTGDREFLRAAAYPLMKGASTFFIDALVKDPKTGFLYTGPSNSPEQGGL HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCE VMGPTMDREIVRSLFGETIAAAKILNLDPALQEQLATLRKQIAPLQIGKYGQLQEWMEDV EECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH DDPKNEHRHVSHLWAVYPGSEVTPYGTPELFKAARQSLIFRGDAATGWSMGWKLNLWARF CCCHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCEEEEEEHEE LDGDHAYKILQNLLAPANDGNRALKIPAHPGVFKNMFDAHPPFQIDGNFGATAGITEMLL CCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCCCEEECCCCCCHHHHHHHHH QSDDPYATPTSLTPVQSGAAGFLHLLPALPSALPDGKVTGLLARGGFEVSLNWKAGKLVT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCEEEE ATITAHQAKPLKVRYAGKEIELLTRPRQTITLGPDLKVL EEEEECCCCCEEEEECCCEEEEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA